Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:48:26 (10824): wrapper (7.7.26015): starting
07:48:26 (10824): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:48:27] Arguments: --nthreads 8
[2026-01-09 07:48:27] Threads: 8
[2026-01-09 07:48:27] Checking for CVMFS
[2026-01-09 07:48:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:48:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:48:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:48:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:48:27] 2.11.2.0 22482 35058 95576 154934 1 57 20546354 25165824 0 130560 0 15415832 99.831 9752259 3882 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 07:48:27] CVMFS is ok
[2026-01-09 07:48:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:48:27] Checking for apptainer binary...
[2026-01-09 07:48:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:48:27] Running /usr/bin/apptainer --version
[2026-01-09 07:48:27] apptainer version 1.3.2-1.el7
[2026-01-09 07:48:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:48:28] cg-vwn445.simple-grid.lan
[2026-01-09 07:48:28] apptainer works
[2026-01-09 07:48:29] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:48:29] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:48:29] Starting ATLAS job with PandaID=6963076540
[2026-01-09 07:48:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:29:06]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:29:06] 2026-01-09 09:28:25,720 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 10:29:06] 2026-01-09 09:28:25,722 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6963076540/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:29:06] 2026-01-09 09:28:25,723 | INFO     | extracted standard info from prmon json
[2026-01-09 10:29:06] 2026-01-09 09:28:25,723 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:29:06] 2026-01-09 09:28:25,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:29:06] 2026-01-09 09:28:25,724 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:29:06] 2026-01-09 09:28:25,724 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:29:06] 2026-01-09 09:28:25,728 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:29:06] 2026-01-09 09:28:25,728 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,729 | INFO     | sum of deviations: 7502107570.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,729 | INFO     | mean x: 1767946114.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,730 | INFO     | mean y: 2461681.9554140125
[2026-01-09 10:29:06] 2026-01-09 09:28:25,730 | INFO     | intersect: -11050853378.111319
[2026-01-09 10:29:06] 2026-01-09 09:28:25,730 | INFO     | chi2: 2.3038824738517096
[2026-01-09 10:29:06] 2026-01-09 09:28:25,731 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,732 | INFO     | sum of deviations: 17349458838.000008
[2026-01-09 10:29:06] 2026-01-09 09:28:25,732 | INFO     | mean x: 1767945961.5
[2026-01-09 10:29:06] 2026-01-09 09:28:25,732 | INFO     | mean y: 2474840.1315789474
[2026-01-09 10:29:06] 2026-01-09 09:28:25,732 | INFO     | intersect: -28166077581.463764
[2026-01-09 10:29:06] 2026-01-09 09:28:25,732 | INFO     | chi2: 1.5372120560168285
[2026-01-09 10:29:06] 2026-01-09 09:28:25,733 | INFO     | current chi2=1.5372120560168285 (change=33.27732323746251 %)
[2026-01-09 10:29:06] 2026-01-09 09:28:25,733 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,734 | INFO     | sum of deviations: 16662785863.999989
[2026-01-09 10:29:06] 2026-01-09 09:28:25,734 | INFO     | mean x: 1767945809.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,734 | INFO     | mean y: 2473832.544217687
[2026-01-09 10:29:06] 2026-01-09 09:28:25,735 | INFO     | intersect: -29906825016.751446
[2026-01-09 10:29:06] 2026-01-09 09:28:25,735 | INFO     | chi2: 1.539074639158462
[2026-01-09 10:29:06] 2026-01-09 09:28:25,735 | INFO     | current chi2=1.539074639158462 (change=-0.12116631107224841 %)
[2026-01-09 10:29:06] 2026-01-09 09:28:25,735 | INFO     | right removable region: 146
[2026-01-09 10:29:06] 2026-01-09 09:28:25,736 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,737 | INFO     | sum of deviations: -15317696275.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,737 | INFO     | mean x: 1767946266.5
[2026-01-09 10:29:06] 2026-01-09 09:28:25,737 | INFO     | mean y: 2492538.3815789474
[2026-01-09 10:29:06] 2026-01-09 09:28:25,737 | INFO     | intersect: 24872282943.161045
[2026-01-09 10:29:06] 2026-01-09 09:28:25,738 | INFO     | chi2: 0.8780852900725297
[2026-01-09 10:29:06] 2026-01-09 09:28:25,738 | INFO     | current chi2=0.8780852900725297 (change=61.88671514113667 %)
[2026-01-09 10:29:06] 2026-01-09 09:28:25,738 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,739 | INFO     | sum of deviations: -14395226764.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,739 | INFO     | mean x: 1767946419.0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,739 | INFO     | mean y: 2491105.4285714286
[2026-01-09 10:29:06] 2026-01-09 09:28:25,740 | INFO     | intersect: 25841584961.426586
[2026-01-09 10:29:06] 2026-01-09 09:28:25,740 | INFO     | chi2: 0.8628352395040981
[2026-01-09 10:29:06] 2026-01-09 09:28:25,740 | INFO     | current chi2=0.8628352395040981 (change=1.7367391005003496 %)
[2026-01-09 10:29:06] 2026-01-09 09:28:25,740 | INFO     | left removable region: 20
[2026-01-09 10:29:06] 2026-01-09 09:28:25,741 | INFO     | sum of square deviations: 620244187.5
[2026-01-09 10:29:06] 2026-01-09 09:28:25,741 | INFO     | sum of deviations: 2345237506.5000005
[2026-01-09 10:29:06] 2026-01-09 09:28:25,742 | INFO     | mean x: 1767946388.5
[2026-01-09 10:29:06] 2026-01-09 09:28:25,742 | INFO     | mean y: 2493623.801587302
[2026-01-09 10:29:06] 2026-01-09 09:28:25,742 | INFO     | intersect: -6682380274.821479
[2026-01-09 10:29:06] 2026-01-09 09:28:25,742 | INFO     | chi2: 0.00014992980802792637
[2026-01-09 10:29:06] 2026-01-09 09:28:25,743 | INFO     | current memory leak: 3.78 B/s (using 126 data points, chi2=0.00)
[2026-01-09 10:29:06] 2026-01-09 09:28:25,743 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 10:29:06] 2026-01-09 09:28:25,744 | INFO     | ..............................
[2026-01-09 10:29:06] 2026-01-09 09:28:25,744 | INFO     | . Timing measurements:
[2026-01-09 10:29:06] 2026-01-09 09:28:25,744 | INFO     | . get job = 0 s
[2026-01-09 10:29:06] 2026-01-09 09:28:25,744 | INFO     | . initial setup = 1 s
[2026-01-09 10:29:06] 2026-01-09 09:28:25,744 | INFO     | . payload setup = 7 s
[2026-01-09 10:29:06] 2026-01-09 09:28:25,744 | INFO     | . stage-in = 0 s
[2026-01-09 10:29:06] 2026-01-09 09:28:25,745 | INFO     | . payload execution = 9539 s
[2026-01-09 10:29:06] 2026-01-09 09:28:25,745 | INFO     | . stage-out = 1 s
[2026-01-09 10:29:06] 2026-01-09 09:28:25,745 | INFO     | . log creation = 0 s
[2026-01-09 10:29:06] 2026-01-09 09:28:25,745 | INFO     | ..............................
[2026-01-09 10:29:06] 2026-01-09 09:28:25,864 | INFO     | 
[2026-01-09 10:29:06] 2026-01-09 09:28:25,864 | INFO     | job summary report
[2026-01-09 10:29:06] 2026-01-09 09:28:25,864 | INFO     | --------------------------------------------------
[2026-01-09 10:29:06] 2026-01-09 09:28:25,864 | INFO     | PanDA job id: 6963076540
[2026-01-09 10:29:06] 2026-01-09 09:28:25,864 | INFO     | task id: 47898826
[2026-01-09 10:29:06] 2026-01-09 09:28:25,865 | INFO     | errors: (none)
[2026-01-09 10:29:06] 2026-01-09 09:28:25,865 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:29:06] 2026-01-09 09:28:25,865 | INFO     | pilot state: finished 
[2026-01-09 10:29:06] 2026-01-09 09:28:25,865 | INFO     | transexitcode: 0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,865 | INFO     | exeerrorcode: 0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,865 | INFO     | exeerrordiag: 
[2026-01-09 10:29:06] 2026-01-09 09:28:25,865 | INFO     | exitcode: 0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,865 | INFO     | exitmsg: OK
[2026-01-09 10:29:06] 2026-01-09 09:28:25,865 | INFO     | cpuconsumptiontime: 71533 s
[2026-01-09 10:29:06] 2026-01-09 09:28:25,866 | INFO     | nevents: 400
[2026-01-09 10:29:06] 2026-01-09 09:28:25,866 | INFO     | neventsw: 0
[2026-01-09 10:29:06] 2026-01-09 09:28:25,866 | INFO     | pid: 20989
[2026-01-09 10:29:06] 2026-01-09 09:28:25,866 | INFO     | pgrp: 20989
[2026-01-09 10:29:06] 2026-01-09 09:28:25,866 | INFO     | corecount: 8
[2026-01-09 10:29:06] 2026-01-09 09:28:25,866 | INFO     | event service: False
[2026-01-09 10:29:06] 2026-01-09 09:28:25,866 | INFO     | sizes: {0: 2283799, 1: 2283998, 6: 2284260, 11: 2284288, 9551: 2312467, 9552: 2321467, 9556: 2321651, 9565: 2321845}
[2026-01-09 10:29:06] 2026-01-09 09:28:25,866 | INFO     | --------------------------------------------------
[2026-01-09 10:29:06] 2026-01-09 09:28:25,866 | INFO     | 
[2026-01-09 10:29:06] 2026-01-09 09:28:25,867 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-09 10:29:06] 2026-01-09 09:28:25,894 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,894 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,895 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,895 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,895 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,895 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,895 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,895 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,896 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,896 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,896 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,896 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,896 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,896 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:29:06] 2026-01-09 09:28:25,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,897 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:29:06] 2026-01-09 09:28:25,897 | INFO     | job 6963076540 has completed (purged errors)
[2026-01-09 10:29:06] 2026-01-09 09:28:25,897 | INFO     | overall cleanup function is called
[2026-01-09 10:29:06] 2026-01-09 09:28:26,905 | INFO     | --- collectZombieJob: --- 10, [20989]
[2026-01-09 10:29:06] 2026-01-09 09:28:26,906 | INFO     | zombie collector waiting for pid 20989
[2026-01-09 10:29:06] 2026-01-09 09:28:26,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:29:06] 2026-01-09 09:28:26,906 | INFO     | collected zombie processes
[2026-01-09 10:29:06] 2026-01-09 09:28:26,906 | INFO     | will attempt to kill all subprocesses of pid=20989
[2026-01-09 10:29:06] 2026-01-09 09:28:26,970 | INFO     | process IDs to be killed: [20989] (in reverse order)
[2026-01-09 10:29:06] 2026-01-09 09:28:27,050 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:29:06] 2026-01-09 09:28:27,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:29:06] 2026-01-09 09:28:27,052 | INFO     | did not find any defunct processes belonging to 20989
[2026-01-09 10:29:06] 2026-01-09 09:28:27,054 | INFO     | did not find any defunct processes belonging to 20989
[2026-01-09 10:29:06] 2026-01-09 09:28:27,054 | INFO     | ready for new job
[2026-01-09 10:29:06] 2026-01-09 09:28:27,054 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:29:06] 2026-01-09 09:28:27,056 | INFO     | ***************************************
[2026-01-09 10:29:06] 2026-01-09 09:28:27,056 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:29:06] 2026-01-09 09:28:27,056 | INFO     | ***************************************
[2026-01-09 10:29:06] 2026-01-09 09:28:27,057 | INFO     | 
[2026-01-09 10:29:06] 2026-01-09 09:28:27,057 | INFO     | pilot is running in a VM
[2026-01-09 10:29:06] 2026-01-09 09:28:27,057 | INFO     | architecture information:
[2026-01-09 10:29:06] 2026-01-09 09:28:27,059 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:29:06] 2026-01-09 09:28:27,083 | INFO     | cat /etc/os-release:
[2026-01-09 10:29:06] NAME="CentOS Linux"
[2026-01-09 10:29:06] VERSION="7 (Core)"
[2026-01-09 10:29:06] ID="centos"
[2026-01-09 10:29:06] ID_LIKE="rhel fedora"
[2026-01-09 10:29:06] VERSION_ID="7"
[2026-01-09 10:29:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:29:06] ANSI_COLOR="0;31"
[2026-01-09 10:29:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:29:06] HOME_URL="https://www.centos.org/"
[2026-01-09 10:29:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:29:06] 
[2026-01-09 10:29:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:29:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:29:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:29:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:29:06] 
[2026-01-09 10:29:06] 2026-01-09 09:28:27,083 | INFO     | ***************************************
[2026-01-09 10:29:06] 2026-01-09 09:28:27,587 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-09 10:29:06] 2026-01-09 09:28:27,619 | INFO     | sufficient remaining disk space (498124980224 B)
[2026-01-09 10:29:06] 2026-01-09 09:28:27,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:29:06] 2026-01-09 09:28:27,620 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:29:06] 2026-01-09 09:28:27,620 | INFO     | update_server=False
[2026-01-09 10:29:06] 2026-01-09 09:28:27,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:29:06] 2026-01-09 09:28:27,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:29:06] 2026-01-09 09:28:27,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:29:06] 2026-01-09 09:28:27,700 | INFO     | all payload control threads have been joined
[2026-01-09 10:29:06] 2026-01-09 09:28:27,771 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 10:29:06] 2026-01-09 09:28:27,772 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 10:29:06] 2026-01-09 09:28:27,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:29:06] 2026-01-09 09:28:27,772 | INFO     | will abort loop
[2026-01-09 10:29:06] 2026-01-09 09:28:28,187 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:29:06] 2026-01-09 09:28:28,458 | INFO     | all data control threads have been joined
[2026-01-09 10:29:06] 2026-01-09 09:28:28,626 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:28,627 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:28,706 | INFO     | [payload] control thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:28,778 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:28,829 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:28,829 | INFO     | [job] validate thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:28,933 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:29,053 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:29,166 | INFO     | all job control threads have been joined
[2026-01-09 10:29:06] 2026-01-09 09:28:29,453 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:29,464 | INFO     | [data] control thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:29,572 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:30,170 | INFO     | [job] control thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:30,183 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:30,193 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:31,628 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:38,646 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:29:06] 2026-01-09 09:28:39,652 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:29:06] 2026-01-09 09:28:57,716 | INFO     | PID=14553 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 10:29:06] 2026-01-09 09:28:57,717 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:29:06] 2026-01-09 09:28:57,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:29:06] 2026-01-09 09:28:57,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:29:06] 2026-01-09 09:28:59,587 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:29:06] 2026-01-09 09:29:01,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369854011200)>', '<ExcThread(monitor, started 140369178121984)>']
[2026-01-09 10:29:06] 2026-01-09 09:29:01,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:29:06] 2026-01-09 09:29:01,738 | INFO     | [monitor] control thread has ended
[2026-01-09 10:29:06] 2026-01-09 09:29:06,418 | INFO     | all workflow threads have been joined
[2026-01-09 10:29:06] 2026-01-09 09:29:06,418 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:29:06] 2026-01-09 09:29:06,418 | INFO     | traces error code: 0
[2026-01-09 10:29:06] 2026-01-09 09:29:06,419 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:29:06] 2026-01-09 09:29:06,560 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:29:06] 2026-01-09 09:29:06,565 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:29:06] 2026-01-09 09:29:06,571 [wrapper] pilotpid: 14553
[2026-01-09 10:29:06] 2026-01-09 09:29:06,577 [wrapper] Pilot exit status: 0
[2026-01-09 10:29:06] 2026-01-09 09:29:06,601 [wrapper] pandaids: 6963076540
[2026-01-09 10:29:06] 2026-01-09 09:29:06,638 [wrapper] cleanup supervisor_pilot  5127 14554
[2026-01-09 10:29:06] 2026-01-09 09:29:06,649 [wrapper] Test setup, not cleaning
[2026-01-09 10:29:06] 2026-01-09 09:29:06,653 [wrapper] apfmon messages muted
[2026-01-09 10:29:06] 2026-01-09 09:29:06,657 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:29:06] 2026-01-09 09:29:06,661 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:29:06]  *** Error codes and diagnostics ***
[2026-01-09 10:29:06]     "exeErrorCode": 0,
[2026-01-09 10:29:06]     "exeErrorDiag": "",
[2026-01-09 10:29:06]     "pilotErrorCode": 0,
[2026-01-09 10:29:06]     "pilotErrorDiag": "",
[2026-01-09 10:29:06]  *** Listing of results directory ***
[2026-01-09 10:29:06] total 434632
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:06 pilot3.tar.gz
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:07 queuedata.json
[2026-01-09 10:29:06] -rwx------. 1 boinc boinc     36322 Jan  8 12:07 runpilot2-wrapper.sh
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc       100 Jan  9 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:29:06] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 07:48 run_atlas
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc       105 Jan  9 07:48 job.xml
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc      6391 Jan  9 07:48 init_data.xml
[2026-01-09 10:29:06] -rw-r--r--. 2 boinc boinc 225390601 Jan  9 07:48 EVNT.47898824._000949.pool.root.1
[2026-01-09 10:29:06] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:48 start_atlas.sh
[2026-01-09 10:29:06] drwxrwx--x. 2 boinc boinc        68 Jan  9 07:48 shared
[2026-01-09 10:29:06] -rw-r--r--. 2 boinc boinc    592396 Jan  9 07:48 input.tar.gz
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc         0 Jan  9 07:48 boinc_lockfile
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc      2519 Jan  9 07:48 pandaJob.out
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc    989771 Jan  9 07:48 agis_schedconf.cvmfs.json
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc   1516240 Jan  9 07:48 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:29:06] drwx------. 5 boinc boinc      4096 Jan  9 07:48 pilot3
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc 212413580 Jan  9 10:27 HITS.47898826._023837.pool.root.1
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc       530 Jan  9 10:27 boinc_task_state.xml
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc      1011 Jan  9 10:28 memory_monitor_summary.json
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc    389231 Jan  9 10:28 log.47898826._023837.job.log.tgz.1
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc      7764 Jan  9 10:28 heartbeat.json
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc        95 Jan  9 10:28 pilot_heartbeat.json
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc      8192 Jan  9 10:29 boinc_mmap_file
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc        27 Jan  9 10:29 wrapper_checkpoint.txt
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc      5068 Jan  9 10:29 pilotlog.txt
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc   1286734 Jan  9 10:29 log.47898826._023837.job.log.1
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc       357 Jan  9 10:29 output.list
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc       620 Jan  9 10:29 runtime_log
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc   1699840 Jan  9 10:29 result.tar.gz
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc       652 Jan  9 10:29 YJwKDmP22x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbDkKDm4n7FIo.diag
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc      8832 Jan  9 10:29 runtime_log.err
[2026-01-09 10:29:06] -rw-r--r--. 1 boinc boinc     20737 Jan  9 10:29 stderr.txt
[2026-01-09 10:29:06] HITS file was successfully produced:
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc 212413580 Jan  9 10:27 shared/HITS.pool.root.1
[2026-01-09 10:29:06]  *** Contents of shared directory: ***
[2026-01-09 10:29:06] total 429804
[2026-01-09 10:29:06] -rw-r--r--. 2 boinc boinc 225390601 Jan  9 07:48 ATLAS.root_0
[2026-01-09 10:29:06] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:48 start_atlas.sh
[2026-01-09 10:29:06] -rw-r--r--. 2 boinc boinc    592396 Jan  9 07:48 input.tar.gz
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc 212413580 Jan  9 10:27 HITS.pool.root.1
[2026-01-09 10:29:06] -rw-------. 1 boinc boinc   1699840 Jan  9 10:29 result.tar.gz
10:29:08 (10824): run_atlas exited; CPU time 71598.974582
10:29:08 (10824): called boinc_finish(0)

</stderr_txt>
]]>

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