Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:42:40 (1982561): wrapper (7.7.26015): starting
14:42:40 (1982561): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 14:42:40] Arguments: --nthreads 4
[2026-01-09 14:42:40] Threads: 4
[2026-01-09 14:42:40] Checking for CVMFS
[2026-01-09 14:42:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:42:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:42:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:42:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:42:41] 2.9.2.0 1528783 1617 89148 154945 2 57 34245214 36864001 0 130560 0 1188064 99.990 60494 3523 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 14:42:41] CVMFS is ok
[2026-01-09 14:42:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:42:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:42:41] Further information can be found at the LHC@home message board.
[2026-01-09 14:42:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:42:41] Checking for apptainer binary...
[2026-01-09 14:42:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:42:41] Running /usr/bin/apptainer --version
[2026-01-09 14:42:41] apptainer version 1.4.1-1.1
[2026-01-09 14:42:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:42:41] cosA131b
[2026-01-09 14:42:41] apptainer works
[2026-01-09 14:42:41] Set ATHENA_PROC_NUMBER=4
[2026-01-09 14:42:41] Set ATHENA_CORE_NUMBER=4
[2026-01-09 14:42:41] Starting ATLAS job with PandaID=6963147270
[2026-01-09 14:42:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:22:12]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:22:12]  replicas=None
[2026-01-09 16:22:12]  scope=mc23_13p6TeV
[2026-01-09 16:22:12]  status=None
[2026-01-09 16:22:12]  status_code=0
[2026-01-09 16:22:12]  storage_token=
[2026-01-09 16:22:12]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6963147270/log.47898826._027465.job.log.tgz.1
[2026-01-09 16:22:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/b9/log.47898826._027465.job.log.tgz.1
[2026-01-09 16:22:12]  workdir=None
[2026-01-09 16:22:12] ]
[2026-01-09 16:22:12] 2026-01-09 15:21:29,959 | INFO     | transferring file log.47898826._027465.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6963147270/log.47898826._027465.job.log.tgz.1 to /local/data/boinc/
[2026-01-09 16:22:12] 2026-01-09 15:21:29,959 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6963147270/log.47898826._027465.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0274
[2026-01-09 16:22:12] 2026-01-09 15:21:29,979 | INFO     | adding to output.list: log.47898826._027465.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/b9/log.47898826._027465.job.log.tg
[2026-01-09 16:22:12] 2026-01-09 15:21:29,979 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 16:22:12] 2026-01-09 15:21:29,979 | INFO     | summary of transferred files:
[2026-01-09 16:22:12] 2026-01-09 15:21:29,979 | INFO     |  -- lfn=log.47898826._027465.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 16:22:12] 2026-01-09 15:21:29,979 | INFO     | stage-out finished correctly
[2026-01-09 16:22:12] 2026-01-09 15:21:30,688 | INFO     | time since job start (5921s) is within the limit (349056.0s)
[2026-01-09 16:22:12] 2026-01-09 15:21:31,831 | INFO     | monitor loop #455: job 0:6963147270 is in state 'finished'
[2026-01-09 16:22:12] 2026-01-09 15:21:31,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:22:12] 2026-01-09 15:21:32,695 | INFO     | time since job start (5923s) is within the limit (349056.0s)
[2026-01-09 16:22:12] 2026-01-09 15:21:32,991 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 16:22:12] 2026-01-09 15:21:34,335 | INFO     | monitor loop #456: job 0:6963147270 is in state 'finished'
[2026-01-09 16:22:12] 2026-01-09 15:21:34,335 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:22:12] 2026-01-09 15:21:34,701 | INFO     | time since job start (5925s) is within the limit (349056.0s)
[2026-01-09 16:22:12] 2026-01-09 15:21:35,763 | INFO     | PID=1986347 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:22:12] 2026-01-09 15:21:35,788 | INFO     | job 6963147270 has state=finished
[2026-01-09 16:22:12] 2026-01-09 15:21:35,788 | INFO     | preparing for final server update for job 6963147270 in state='finished'
[2026-01-09 16:22:12] 2026-01-09 15:21:35,789 | INFO     | this job has now completed (state=finished)
[2026-01-09 16:22:12] 2026-01-09 15:21:35,789 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 16:22:12] 2026-01-09 15:21:35,789 | INFO     | log transfer has been attempted: DONE
[2026-01-09 16:22:12] 2026-01-09 15:21:35,789 | INFO     | job 6963147270 has finished - writing final server update
[2026-01-09 16:22:12] 2026-01-09 15:21:35,789 | INFO     | total number of processed events: 400 (read)
[2026-01-09 16:22:12] 2026-01-09 15:21:35,789 | INFO     | executing command: lscpu
[2026-01-09 16:22:12] 2026-01-09 15:21:35,810 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 16:22:12] 2026-01-09 15:21:36,764 | INFO     | time since job start (5927s) is within the limit (349056.0s)
[2026-01-09 16:22:12] 2026-01-09 15:21:36,838 | INFO     | monitor loop #457: job 0:6963147270 is in state 'finished'
[2026-01-09 16:22:12] 2026-01-09 15:21:36,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:22:12] 2026-01-09 15:21:38,770 | INFO     | time since job start (5929s) is within the limit (349056.0s)
[2026-01-09 16:22:12] 2026-01-09 15:21:39,254 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:22:12] 2026-01-09 15:21:39,256 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3572.3463125
[2026-01-09 16:22:12] 2026-01-09 15:21:39,257 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963147270/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:22:12] 2026-01-09 15:21:39,257 | INFO     | extracted standard info from prmon json
[2026-01-09 16:22:12] 2026-01-09 15:21:39,257 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:22:12] 2026-01-09 15:21:39,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:22:12] 2026-01-09 15:21:39,257 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:22:12] 2026-01-09 15:21:39,257 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:22:12] 2026-01-09 15:21:39,258 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:22:12] 2026-01-09 15:21:39,258 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | sum of deviations: -16477899164.500004
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | mean x: 1767969211.5
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | mean y: 2492822.5222222223
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | intersect: 128893971536.83661
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | chi2: 0.14116772042461576
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | current memory leak: -72.90 B/s (using 90 data points, chi2=0.14)
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | could have reported an average CPU frequency of 3622 MHz (7 samples)
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | ..............................
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | . Timing measurements:
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | . get job = 0 s
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | . initial setup = 1 s
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | . payload setup = 4 s
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | . stage-in = 0 s
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | . payload execution = 5897 s
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | . stage-out = 0 s
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | . log creation = 0 s
[2026-01-09 16:22:12] 2026-01-09 15:21:39,259 | INFO     | ..............................
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | 
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | job summary report
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | --------------------------------------------------
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | PanDA job id: 6963147270
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | task id: 47898826
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | errors: (none)
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | pilot state: finished 
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | transexitcode: 0
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | exeerrorcode: 0
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | exeerrordiag: 
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | exitcode: 0
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | exitmsg: OK
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | cpuconsumptiontime: 22553 s
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | nevents: 400
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | neventsw: 0
[2026-01-09 16:22:12] 2026-01-09 15:21:39,299 | INFO     | pid: 1992923
[2026-01-09 16:22:12] 2026-01-09 15:21:39,300 | INFO     | pgrp: 1992923
[2026-01-09 16:22:12] 2026-01-09 15:21:39,300 | INFO     | corecount: 4
[2026-01-09 16:22:12] 2026-01-09 15:21:39,300 | INFO     | event service: False
[2026-01-09 16:22:12] 2026-01-09 15:21:39,300 | INFO     | sizes: {0: 2283973, 1: 2283973, 4: 2284263, 11: 2284291, 5905: 2311152, 5906: 2320156, 5909: 2320340, 5915: 2320534}
[2026-01-09 16:22:12] 2026-01-09 15:21:39,300 | INFO     | --------------------------------------------------
[2026-01-09 16:22:12] 2026-01-09 15:21:39,300 | INFO     | 
[2026-01-09 16:22:12] 2026-01-09 15:21:39,300 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 16:22:12] 2026-01-09 15:21:39,317 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,317 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,317 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | job 6963147270 has completed (purged errors)
[2026-01-09 16:22:12] 2026-01-09 15:21:39,318 | INFO     | overall cleanup function is called
[2026-01-09 16:22:12] 2026-01-09 15:21:40,325 | INFO     | --- collectZombieJob: --- 10, [1992923]
[2026-01-09 16:22:12] 2026-01-09 15:21:40,325 | INFO     | zombie collector waiting for pid 1992923
[2026-01-09 16:22:12] 2026-01-09 15:21:40,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:22:12] 2026-01-09 15:21:40,325 | INFO     | collected zombie processes
[2026-01-09 16:22:12] 2026-01-09 15:21:40,325 | INFO     | will attempt to kill all subprocesses of pid=1992923
[2026-01-09 16:22:12] 2026-01-09 15:21:40,369 | INFO     | process IDs to be killed: [1992923] (in reverse order)
[2026-01-09 16:22:12] 2026-01-09 15:21:40,402 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:22:12] 2026-01-09 15:21:40,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:22:12] 2026-01-09 15:21:40,404 | INFO     | did not find any defunct processes belonging to 1992923
[2026-01-09 16:22:12] 2026-01-09 15:21:40,405 | INFO     | did not find any defunct processes belonging to 1992923
[2026-01-09 16:22:12] 2026-01-09 15:21:40,405 | INFO     | ready for new job
[2026-01-09 16:22:12] 2026-01-09 15:21:40,405 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:22:12] 2026-01-09 15:21:40,406 | INFO     | ***************************************
[2026-01-09 16:22:12] 2026-01-09 15:21:40,406 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:22:12] 2026-01-09 15:21:40,406 | INFO     | ***************************************
[2026-01-09 16:22:12] 2026-01-09 15:21:40,406 | INFO     | 
[2026-01-09 16:22:12] 2026-01-09 15:21:40,407 | INFO     | architecture information:
[2026-01-09 16:22:12] 2026-01-09 15:21:40,407 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:22:12] 2026-01-09 15:21:40,421 | INFO     | cat /etc/os-release:
[2026-01-09 16:22:12] NAME="CentOS Linux"
[2026-01-09 16:22:12] VERSION="7 (Core)"
[2026-01-09 16:22:12] ID="centos"
[2026-01-09 16:22:12] ID_LIKE="rhel fedora"
[2026-01-09 16:22:12] VERSION_ID="7"
[2026-01-09 16:22:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:22:12] ANSI_COLOR="0;31"
[2026-01-09 16:22:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:22:12] HOME_URL="https://www.centos.org/"
[2026-01-09 16:22:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:22:12] 
[2026-01-09 16:22:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:22:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:22:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:22:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:22:12] 
[2026-01-09 16:22:12] 2026-01-09 15:21:40,421 | INFO     | ***************************************
[2026-01-09 16:22:12] 2026-01-09 15:21:40,924 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 16:22:12] 2026-01-09 15:21:40,942 | INFO     | sufficient remaining disk space (321414758400 B)
[2026-01-09 16:22:12] 2026-01-09 15:21:40,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:22:12] 2026-01-09 15:21:40,942 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:22:12] 2026-01-09 15:21:40,942 | INFO     | update_server=False
[2026-01-09 16:22:12] 2026-01-09 15:21:40,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:22:12] 2026-01-09 15:21:40,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:22:12] 2026-01-09 15:21:40,943 | INFO     | aborting loop
[2026-01-09 16:22:12] 2026-01-09 15:21:40,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:22:12] 2026-01-09 15:21:40,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:22:12] 2026-01-09 15:21:41,281 | INFO     | all data control threads have been joined
[2026-01-09 16:22:12] 2026-01-09 15:21:41,900 | INFO     | all payload control threads have been joined
[2026-01-09 16:22:12] 2026-01-09 15:21:41,948 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:41,949 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:41,949 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:42,099 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:42,287 | INFO     | [data] control thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:42,316 | INFO     | all job control threads have been joined
[2026-01-09 16:22:12] 2026-01-09 15:21:42,427 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:42,906 | INFO     | [payload] control thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:42,944 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:42,949 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:43,183 | INFO     | [job] validate thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:43,282 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:43,322 | INFO     | [job] control thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:43,390 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:43,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:22:12] 2026-01-09 15:21:43,544 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:47,551 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:51,833 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:22:12] 2026-01-09 15:21:52,839 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:22:12] 2026-01-09 15:21:55,883 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:22:12] 2026-01-09 15:21:56,845 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852223895360)>', '<ExcThread(monitor, started 139851500345088)>']
[2026-01-09 16:22:12] 2026-01-09 15:22:01,871 | INFO     | all workflow threads have been joined
[2026-01-09 16:22:12] 2026-01-09 15:22:01,871 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:22:12] 2026-01-09 15:22:01,871 | INFO     | traces error code: 0
[2026-01-09 16:22:12] 2026-01-09 15:22:01,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:22:12] 2026-01-09 15:22:11,901 | INFO     | PID=1986347 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:22:12] 2026-01-09 15:22:11,901 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:22:12] 2026-01-09 15:22:11,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:22:12] 2026-01-09 15:22:11,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:22:12] 2026-01-09 15:22:11,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:22:12] 2026-01-09 15:22:11,901 | INFO     | [monitor] control thread has ended
[2026-01-09 16:22:12] 2026-01-09 15:22:11,977 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:22:12] 2026-01-09 15:22:11,981 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:22:12] 2026-01-09 15:22:11,985 [wrapper] pilotpid: 1986347
[2026-01-09 16:22:12] 2026-01-09 15:22:11,989 [wrapper] Pilot exit status: 0
[2026-01-09 16:22:12] 2026-01-09 15:22:12,002 [wrapper] pandaids: 6963147270
[2026-01-09 16:22:12] 2026-01-09 15:22:12,024 [wrapper] cleanup supervisor_pilot 2005103 1986348
[2026-01-09 16:22:12] 2026-01-09 15:22:12,027 [wrapper] Test setup, not cleaning
[2026-01-09 16:22:12] 2026-01-09 15:22:12,031 [wrapper] apfmon messages muted
[2026-01-09 16:22:12] 2026-01-09 15:22:12,035 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:22:12] 2026-01-09 15:22:12,039 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:22:12]  *** Error codes and diagnostics ***
[2026-01-09 16:22:12]     "exeErrorCode": 0,
[2026-01-09 16:22:12]     "exeErrorDiag": "",
[2026-01-09 16:22:12]     "pilotErrorCode": 0,
[2026-01-09 16:22:12]     "pilotErrorDiag": "",
[2026-01-09 16:22:12]  *** Listing of results directory ***
[2026-01-09 16:22:12] total 439492
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 16:22:12] -rwx------ 1 boinc boinc     36322 Jan  8 16:06 runpilot2-wrapper.sh
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc      5112 Jan  8 16:07 queuedata.json
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc       100 Jan  9 14:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:22:12] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 14:42 run_atlas
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc       105 Jan  9 14:42 job.xml
[2026-01-09 16:22:12] -rw-r--r-- 2 boinc boinc 225356025 Jan  9 14:42 EVNT.47898824._001087.pool.root.1
[2026-01-09 16:22:12] -rw-r--r-- 2 boinc boinc    592396 Jan  9 14:42 input.tar.gz
[2026-01-09 16:22:12] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:42 start_atlas.sh
[2026-01-09 16:22:12] drwxrwx--x 2 boinc boinc      4096 Jan  9 14:42 shared
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:42 boinc_setup_complete
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc      6378 Jan  9 14:42 init_data.xml
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:42 boinc_lockfile
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc      2519 Jan  9 14:42 pandaJob.out
[2026-01-09 16:22:12] -rw------- 1 boinc boinc    989377 Jan  9 14:42 agis_schedconf.cvmfs.json
[2026-01-09 16:22:12] -rw------- 1 boinc boinc   1516240 Jan  9 14:42 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:22:12] drwx------ 5 boinc boinc      4096 Jan  9 14:42 pilot3
[2026-01-09 16:22:12] -rw------- 1 boinc boinc 218474866 Jan  9 16:21 HITS.47898826._027465.pool.root.1
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc       529 Jan  9 16:21 boinc_task_state.xml
[2026-01-09 16:22:12] -rw------- 1 boinc boinc        95 Jan  9 16:21 pilot_heartbeat.json
[2026-01-09 16:22:12] -rw------- 1 boinc boinc      1018 Jan  9 16:21 memory_monitor_summary.json
[2026-01-09 16:22:12] -rw------- 1 boinc boinc    289441 Jan  9 16:21 log.47898826._027465.job.log.tgz.1
[2026-01-09 16:22:12] -rw------- 1 boinc boinc      7778 Jan  9 16:21 heartbeat.json
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc        27 Jan  9 16:21 wrapper_checkpoint.txt
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc      8192 Jan  9 16:21 boinc_mmap_file
[2026-01-09 16:22:12] -rw------- 1 boinc boinc       747 Jan  9 16:22 pilotlog.txt
[2026-01-09 16:22:12] -rw------- 1 boinc boinc    860461 Jan  9 16:22 log.47898826._027465.job.log.1
[2026-01-09 16:22:12] -rw------- 1 boinc boinc       357 Jan  9 16:22 output.list
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc       620 Jan  9 16:22 runtime_log
[2026-01-09 16:22:12] -rw------- 1 boinc boinc   1167360 Jan  9 16:22 result.tar.gz
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc      8907 Jan  9 16:22 runtime_log.err
[2026-01-09 16:22:12] -rw------- 1 boinc boinc       661 Jan  9 16:22 QxBLDmDm6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZokKDm6vKtyn.diag
[2026-01-09 16:22:12] -rw-r--r-- 1 boinc boinc     21999 Jan  9 16:22 stderr.txt
[2026-01-09 16:22:12] HITS file was successfully produced:
[2026-01-09 16:22:12] -rw------- 1 boinc boinc 218474866 Jan  9 16:21 shared/HITS.pool.root.1
[2026-01-09 16:22:12]  *** Contents of shared directory: ***
[2026-01-09 16:22:12] total 435176
[2026-01-09 16:22:12] -rw-r--r-- 2 boinc boinc 225356025 Jan  9 14:42 ATLAS.root_0
[2026-01-09 16:22:12] -rw-r--r-- 2 boinc boinc    592396 Jan  9 14:42 input.tar.gz
[2026-01-09 16:22:12] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:42 start_atlas.sh
[2026-01-09 16:22:12] -rw------- 1 boinc boinc 218474866 Jan  9 16:21 HITS.pool.root.1
[2026-01-09 16:22:12] -rw------- 1 boinc boinc   1167360 Jan  9 16:22 result.tar.gz
16:22:13 (1982561): run_atlas exited; CPU time 22572.884009
16:22:13 (1982561): called boinc_finish(0)

</stderr_txt>
]]>

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