Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:16:56 (6981): wrapper (7.7.26015): starting
09:16:56 (6981): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:16:56] Arguments: --nthreads 8
[2026-01-09 09:16:56] Threads: 8
[2026-01-09 09:16:56] Checking for CVMFS
[2026-01-09 09:16:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:16:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:16:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:16:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:16:57] 2.11.2.0 1091 35163 91724 154937 3 9 19809736 25165825 0 130560 0 17575660 99.830 9654913 3451 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 09:16:57] CVMFS is ok
[2026-01-09 09:16:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:16:57] Checking for apptainer binary...
[2026-01-09 09:16:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:16:57] Running /usr/bin/apptainer --version
[2026-01-09 09:16:57] apptainer version 1.3.2-1.el7
[2026-01-09 09:16:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:16:58] cg-vwn498.simple-grid.lan
[2026-01-09 09:16:58] apptainer works
[2026-01-09 09:16:58] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:16:58] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:16:58] Starting ATLAS job with PandaID=6963078588
[2026-01-09 09:16:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:46:32]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:46:32] 2026-01-09 10:45:41,538 | INFO     | time since job start (8909s) is within the limit (174528.0s)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,007 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:46:32] 2026-01-09 10:45:42,008 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 11:46:32] 2026-01-09 10:45:42,010 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963078588/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,011 | INFO     | extracted standard info from prmon json
[2026-01-09 11:46:32] 2026-01-09 10:45:42,011 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:46:32] 2026-01-09 10:45:42,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:46:32] 2026-01-09 10:45:42,011 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:46:32] 2026-01-09 10:45:42,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:46:32] 2026-01-09 10:45:42,015 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:46:32] 2026-01-09 10:45:42,015 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 11:46:32] 2026-01-09 10:45:42,016 | INFO     | sum of deviations: -21613330595.0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,016 | INFO     | mean x: 1767951086.5
[2026-01-09 11:46:32] 2026-01-09 10:45:42,017 | INFO     | mean y: 2552423.1506849313
[2026-01-09 11:46:32] 2026-01-09 10:45:42,017 | INFO     | intersect: 39600741499.081055
[2026-01-09 11:46:32] 2026-01-09 10:45:42,017 | INFO     | chi2: 2.487493339847012
[2026-01-09 11:46:32] 2026-01-09 10:45:42,017 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,018 | INFO     | sum of deviations: -10603788477.999996
[2026-01-09 11:46:32] 2026-01-09 10:45:42,018 | INFO     | mean x: 1767950934.0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,018 | INFO     | mean y: 2569526.390070922
[2026-01-09 11:46:32] 2026-01-09 10:45:42,018 | INFO     | intersect: 21570940617.51628
[2026-01-09 11:46:32] 2026-01-09 10:45:42,019 | INFO     | chi2: 1.7281544923937273
[2026-01-09 11:46:32] 2026-01-09 10:45:42,019 | INFO     | current chi2=1.7281544923937273 (change=30.526266554747288 %)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,019 | INFO     | sum of square deviations: 779958810.0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,020 | INFO     | sum of deviations: -9411735231.5
[2026-01-09 11:46:32] 2026-01-09 10:45:42,020 | INFO     | mean x: 1767950781.5
[2026-01-09 11:46:32] 2026-01-09 10:45:42,020 | INFO     | mean y: 2571564.5661764704
[2026-01-09 11:46:32] 2026-01-09 10:45:42,020 | INFO     | intersect: 21336370791.47857
[2026-01-09 11:46:32] 2026-01-09 10:45:42,020 | INFO     | chi2: 1.7285683857999452
[2026-01-09 11:46:32] 2026-01-09 10:45:42,020 | INFO     | current chi2=1.7285683857999452 (change=-0.02395002345216213 %)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,020 | INFO     | right removable region: 135
[2026-01-09 11:46:32] 2026-01-09 10:45:42,020 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,021 | INFO     | sum of deviations: -44692359978.999985
[2026-01-09 11:46:32] 2026-01-09 10:45:42,021 | INFO     | mean x: 1767951239.0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,021 | INFO     | mean y: 2588601.3333333335
[2026-01-09 11:46:32] 2026-01-09 10:45:42,021 | INFO     | intersect: 90907982768.76697
[2026-01-09 11:46:32] 2026-01-09 10:45:42,022 | INFO     | chi2: 0.9356607511777548
[2026-01-09 11:46:32] 2026-01-09 10:45:42,022 | INFO     | current chi2=0.9356607511777548 (change=62.38539672892951 %)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,022 | INFO     | sum of square deviations: 779958810.0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,023 | INFO     | sum of deviations: -43164438811.00001
[2026-01-09 11:46:32] 2026-01-09 10:45:42,023 | INFO     | mean x: 1767951391.5
[2026-01-09 11:46:32] 2026-01-09 10:45:42,023 | INFO     | mean y: 2585918.294117647
[2026-01-09 11:46:32] 2026-01-09 10:45:42,023 | INFO     | intersect: 97844457413.05173
[2026-01-09 11:46:32] 2026-01-09 10:45:42,023 | INFO     | chi2: 0.9181758184830346
[2026-01-09 11:46:32] 2026-01-09 10:45:42,023 | INFO     | current chi2=0.9181758184830346 (change=1.8687256757014947 %)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,023 | INFO     | left removable region: 20
[2026-01-09 11:46:32] 2026-01-09 10:45:42,023 | INFO     | sum of square deviations: 471562330.0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,024 | INFO     | sum of deviations: -23925659303.0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,024 | INFO     | mean x: 1767951361.0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,024 | INFO     | mean y: 2596099.139130435
[2026-01-09 11:46:32] 2026-01-09 10:45:42,024 | INFO     | intersect: 89703149422.72874
[2026-01-09 11:46:32] 2026-01-09 10:45:42,024 | INFO     | chi2: 0.11163313721062255
[2026-01-09 11:46:32] 2026-01-09 10:45:42,025 | INFO     | current memory leak: -50.74 B/s (using 115 data points, chi2=0.11)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,025 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,025 | INFO     | ..............................
[2026-01-09 11:46:32] 2026-01-09 10:45:42,025 | INFO     | . Timing measurements:
[2026-01-09 11:46:32] 2026-01-09 10:45:42,025 | INFO     | . get job = 0 s
[2026-01-09 11:46:32] 2026-01-09 10:45:42,025 | INFO     | . initial setup = 2 s
[2026-01-09 11:46:32] 2026-01-09 10:45:42,025 | INFO     | . payload setup = 7 s
[2026-01-09 11:46:32] 2026-01-09 10:45:42,025 | INFO     | . stage-in = 0 s
[2026-01-09 11:46:32] 2026-01-09 10:45:42,026 | INFO     | . payload execution = 8871 s
[2026-01-09 11:46:32] 2026-01-09 10:45:42,026 | INFO     | . stage-out = 1 s
[2026-01-09 11:46:32] 2026-01-09 10:45:42,026 | INFO     | . log creation = 0 s
[2026-01-09 11:46:32] 2026-01-09 10:45:42,026 | INFO     | ..............................
[2026-01-09 11:46:32] 2026-01-09 10:45:42,124 | INFO     | 
[2026-01-09 11:46:32] 2026-01-09 10:45:42,124 | INFO     | job summary report
[2026-01-09 11:46:32] 2026-01-09 10:45:42,124 | INFO     | --------------------------------------------------
[2026-01-09 11:46:32] 2026-01-09 10:45:42,125 | INFO     | PanDA job id: 6963078588
[2026-01-09 11:46:32] 2026-01-09 10:45:42,125 | INFO     | task id: 47898826
[2026-01-09 11:46:32] 2026-01-09 10:45:42,125 | INFO     | errors: (none)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,125 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:46:32] 2026-01-09 10:45:42,125 | INFO     | pilot state: finished 
[2026-01-09 11:46:32] 2026-01-09 10:45:42,125 | INFO     | transexitcode: 0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,125 | INFO     | exeerrorcode: 0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,125 | INFO     | exeerrordiag: 
[2026-01-09 11:46:32] 2026-01-09 10:45:42,125 | INFO     | exitcode: 0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,126 | INFO     | exitmsg: OK
[2026-01-09 11:46:32] 2026-01-09 10:45:42,126 | INFO     | cpuconsumptiontime: 67593 s
[2026-01-09 11:46:32] 2026-01-09 10:45:42,126 | INFO     | nevents: 400
[2026-01-09 11:46:32] 2026-01-09 10:45:42,126 | INFO     | neventsw: 0
[2026-01-09 11:46:32] 2026-01-09 10:45:42,126 | INFO     | pid: 17152
[2026-01-09 11:46:32] 2026-01-09 10:45:42,126 | INFO     | pgrp: 17152
[2026-01-09 11:46:32] 2026-01-09 10:45:42,126 | INFO     | corecount: 8
[2026-01-09 11:46:32] 2026-01-09 10:45:42,126 | INFO     | event service: False
[2026-01-09 11:46:32] 2026-01-09 10:45:42,126 | INFO     | sizes: {0: 2283969, 5: 2284231, 11: 2284287, 8883: 2312081, 8884: 2321135, 8893: 2321273}
[2026-01-09 11:46:32] 2026-01-09 10:45:42,127 | INFO     | --------------------------------------------------
[2026-01-09 11:46:32] 2026-01-09 10:45:42,127 | INFO     | 
[2026-01-09 11:46:32] 2026-01-09 10:45:42,127 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-09 11:46:32] 2026-01-09 10:45:42,153 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,154 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,154 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,154 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,155 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,155 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,155 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,156 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:46:32] 2026-01-09 10:45:42,156 | INFO     | job 6963078588 has completed (purged errors)
[2026-01-09 11:46:32] 2026-01-09 10:45:42,156 | INFO     | overall cleanup function is called
[2026-01-09 11:46:32] 2026-01-09 10:45:42,619 | INFO     | PID=10720 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 11:46:32] 2026-01-09 10:45:43,164 | INFO     | --- collectZombieJob: --- 10, [17152]
[2026-01-09 11:46:32] 2026-01-09 10:45:43,164 | INFO     | zombie collector waiting for pid 17152
[2026-01-09 11:46:32] 2026-01-09 10:45:43,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:46:32] 2026-01-09 10:45:43,165 | INFO     | collected zombie processes
[2026-01-09 11:46:32] 2026-01-09 10:45:43,165 | INFO     | will attempt to kill all subprocesses of pid=17152
[2026-01-09 11:46:32] 2026-01-09 10:45:43,225 | INFO     | process IDs to be killed: [17152] (in reverse order)
[2026-01-09 11:46:32] 2026-01-09 10:45:43,268 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:46:32] 2026-01-09 10:45:43,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:46:32] 2026-01-09 10:45:43,270 | INFO     | did not find any defunct processes belonging to 17152
[2026-01-09 11:46:32] 2026-01-09 10:45:43,272 | INFO     | did not find any defunct processes belonging to 17152
[2026-01-09 11:46:32] 2026-01-09 10:45:43,272 | INFO     | ready for new job
[2026-01-09 11:46:32] 2026-01-09 10:45:43,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:46:32] 2026-01-09 10:45:43,274 | INFO     | ***************************************
[2026-01-09 11:46:32] 2026-01-09 10:45:43,274 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:46:32] 2026-01-09 10:45:43,274 | INFO     | ***************************************
[2026-01-09 11:46:32] 2026-01-09 10:45:43,274 | INFO     | 
[2026-01-09 11:46:32] 2026-01-09 10:45:43,275 | INFO     | pilot is running in a VM
[2026-01-09 11:46:32] 2026-01-09 10:45:43,275 | INFO     | architecture information:
[2026-01-09 11:46:32] 2026-01-09 10:45:43,276 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:46:32] 2026-01-09 10:45:43,292 | INFO     | cat /etc/os-release:
[2026-01-09 11:46:32] NAME="CentOS Linux"
[2026-01-09 11:46:32] VERSION="7 (Core)"
[2026-01-09 11:46:32] ID="centos"
[2026-01-09 11:46:32] ID_LIKE="rhel fedora"
[2026-01-09 11:46:32] VERSION_ID="7"
[2026-01-09 11:46:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:46:32] ANSI_COLOR="0;31"
[2026-01-09 11:46:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:46:32] HOME_URL="https://www.centos.org/"
[2026-01-09 11:46:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:46:32] 
[2026-01-09 11:46:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:46:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:46:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:46:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:46:32] 
[2026-01-09 11:46:32] 2026-01-09 10:45:43,293 | INFO     | ***************************************
[2026-01-09 11:46:32] 2026-01-09 10:45:43,796 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-09 11:46:32] 2026-01-09 10:45:43,815 | INFO     | sufficient remaining disk space (498782437376 B)
[2026-01-09 11:46:32] 2026-01-09 10:45:43,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:46:32] 2026-01-09 10:45:43,816 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:46:32] 2026-01-09 10:45:43,816 | INFO     | update_server=False
[2026-01-09 11:46:32] 2026-01-09 10:45:43,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:46:32] 2026-01-09 10:45:43,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:46:32] 2026-01-09 10:45:43,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:46:32] 2026-01-09 10:45:44,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:46:32] 2026-01-09 10:45:44,180 | INFO     | all job control threads have been joined
[2026-01-09 11:46:32] 2026-01-09 10:45:44,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:46:32] 2026-01-09 10:45:44,350 | INFO     | aborting loop
[2026-01-09 11:46:32] 2026-01-09 10:45:44,621 | INFO     | all data control threads have been joined
[2026-01-09 11:46:32] 2026-01-09 10:45:44,822 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:44,823 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:44,985 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:45,165 | INFO     | [job] validate thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:45,186 | INFO     | [job] control thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:45,190 | INFO     | all payload control threads have been joined
[2026-01-09 11:46:32] 2026-01-09 10:45:45,300 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:45,305 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:45,355 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:45,548 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:45,620 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:45,627 | INFO     | [data] control thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:46,002 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:46,196 | INFO     | [payload] control thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:46,210 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:46,312 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:45:48,105 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:46:32] 2026-01-09 10:46:14,705 | INFO     | PID=10720 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 11:46:32] 2026-01-09 10:46:14,706 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:46:32] 2026-01-09 10:46:14,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:46:32] 2026-01-09 10:46:14,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:46:32] 2026-01-09 10:46:27,151 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:46:32] 2026-01-09 10:46:27,175 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633893377856)>', '<ExcThread(monitor, started 140633461221120)>']
[2026-01-09 11:46:32] 2026-01-09 10:46:27,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:46:32] 2026-01-09 10:46:27,774 | INFO     | [monitor] control thread has ended
[2026-01-09 11:46:32] 2026-01-09 10:46:32,201 | INFO     | all workflow threads have been joined
[2026-01-09 11:46:32] 2026-01-09 10:46:32,201 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:46:32] 2026-01-09 10:46:32,201 | INFO     | traces error code: 0
[2026-01-09 11:46:32] 2026-01-09 10:46:32,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:46:32] 2026-01-09 10:46:32,335 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:46:32] 2026-01-09 10:46:32,339 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:46:32] 2026-01-09 10:46:32,342 [wrapper] pilotpid: 10720
[2026-01-09 11:46:32] 2026-01-09 10:46:32,346 [wrapper] Pilot exit status: 0
[2026-01-09 11:46:32] 2026-01-09 10:46:32,359 [wrapper] pandaids: 6963078588
[2026-01-09 11:46:32] 2026-01-09 10:46:32,390 [wrapper] cleanup supervisor_pilot  1182 10721
[2026-01-09 11:46:32] 2026-01-09 10:46:32,395 [wrapper] Test setup, not cleaning
[2026-01-09 11:46:32] 2026-01-09 10:46:32,401 [wrapper] apfmon messages muted
[2026-01-09 11:46:32] 2026-01-09 10:46:32,405 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:46:32] 2026-01-09 10:46:32,408 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:46:32]  *** Error codes and diagnostics ***
[2026-01-09 11:46:32]     "exeErrorCode": 0,
[2026-01-09 11:46:32]     "exeErrorDiag": "",
[2026-01-09 11:46:32]     "pilotErrorCode": 0,
[2026-01-09 11:46:32]     "pilotErrorDiag": "",
[2026-01-09 11:46:32]  *** Listing of results directory ***
[2026-01-09 11:46:32] total 439540
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 11:46:32] -rwx------. 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:14 queuedata.json
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc       100 Jan  9 09:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:46:32] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 09:16 run_atlas
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc       105 Jan  9 09:16 job.xml
[2026-01-09 11:46:32] -rw-r--r--. 2 boinc boinc 226734274 Jan  9 09:16 EVNT.47898824._000974.pool.root.1
[2026-01-09 11:46:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:16 start_atlas.sh
[2026-01-09 11:46:32] drwxrwx--x. 2 boinc boinc        68 Jan  9 09:16 shared
[2026-01-09 11:46:32] -rw-r--r--. 2 boinc boinc    592397 Jan  9 09:16 input.tar.gz
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc      6390 Jan  9 09:16 init_data.xml
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc         0 Jan  9 09:16 boinc_lockfile
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc      2519 Jan  9 09:16 pandaJob.out
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc    989759 Jan  9 09:17 agis_schedconf.cvmfs.json
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc   1516240 Jan  9 09:17 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:46:32] drwx------. 5 boinc boinc      4096 Jan  9 09:17 pilot3
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc 216273505 Jan  9 11:44 HITS.47898826._024747.pool.root.1
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc       530 Jan  9 11:45 boinc_task_state.xml
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc      1015 Jan  9 11:45 memory_monitor_summary.json
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc    392906 Jan  9 11:45 log.47898826._024747.job.log.tgz.1
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc      7770 Jan  9 11:45 heartbeat.json
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc      8192 Jan  9 11:46 boinc_mmap_file
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc        27 Jan  9 11:46 wrapper_checkpoint.txt
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc        95 Jan  9 11:46 pilot_heartbeat.json
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc      4809 Jan  9 11:46 pilotlog.txt
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc   1196730 Jan  9 11:46 log.47898826._024747.job.log.1
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc       357 Jan  9 11:46 output.list
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc       620 Jan  9 11:46 runtime_log
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc   1607680 Jan  9 11:46 result.tar.gz
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc      8816 Jan  9 11:46 runtime_log.err
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc       652 Jan  9 11:46 LZxMDmj52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwPkKDm3Ed4Nn.diag
[2026-01-09 11:46:32] -rw-r--r--. 1 boinc boinc     20808 Jan  9 11:46 stderr.txt
[2026-01-09 11:46:32] HITS file was successfully produced:
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc 216273505 Jan  9 11:44 shared/HITS.pool.root.1
[2026-01-09 11:46:32]  *** Contents of shared directory: ***
[2026-01-09 11:46:32] total 434800
[2026-01-09 11:46:32] -rw-r--r--. 2 boinc boinc 226734274 Jan  9 09:16 ATLAS.root_0
[2026-01-09 11:46:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:16 start_atlas.sh
[2026-01-09 11:46:32] -rw-r--r--. 2 boinc boinc    592397 Jan  9 09:16 input.tar.gz
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc 216273505 Jan  9 11:44 HITS.pool.root.1
[2026-01-09 11:46:32] -rw-------. 1 boinc boinc   1607680 Jan  9 11:46 result.tar.gz
11:46:33 (6981): run_atlas exited; CPU time 67648.797064
11:46:33 (6981): called boinc_finish(0)

</stderr_txt>
]]>

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