Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:29:51 (954131): wrapper (7.7.26015): starting
21:29:51 (954131): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 21:29:51] Arguments: --nthreads 8
[2026-01-08 21:29:51] Threads: 8
[2026-01-08 21:29:51] Checking for CVMFS
[2026-01-08 21:29:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:29:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:29:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:29:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:29:53] 2.13.3.0 12548 92809 387236 154927 0 239 37688731 40960001 10472 16776704 34 387600062 99.607 403585828 36438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 21:29:53] CVMFS is ok
[2026-01-08 21:29:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 21:29:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 21:29:53] Further information can be found at the LHC@home message board.
[2026-01-08 21:29:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:29:53] Checking for apptainer binary...
[2026-01-08 21:29:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:29:53] Running /usr/bin/apptainer --version
[2026-01-08 21:29:53] apptainer version 1.4.5-2.el9
[2026-01-08 21:29:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:29:53] c7-11-12.aglt2.org
[2026-01-08 21:29:53] apptainer works
[2026-01-08 21:29:53] Set ATHENA_PROC_NUMBER=8
[2026-01-08 21:29:53] Set ATHENA_CORE_NUMBER=8
[2026-01-08 21:29:53] Starting ATLAS job with PandaID=6963146932
[2026-01-08 21:29:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:44:56]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:44:56] 2026-01-09 11:44:16,566 | INFO     | monitor loop #2056: job 0:6963146932 is in state 'finished'
[2026-01-09 06:44:56] 2026-01-09 11:44:16,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:44:56] 2026-01-09 11:44:18,535 | INFO     | time since job start (33209s) is within the limit (349056.0s)
[2026-01-09 06:44:56] 2026-01-09 11:44:19,073 | INFO     | monitor loop #2057: job 0:6963146932 is in state 'finished'
[2026-01-09 06:44:56] 2026-01-09 11:44:19,073 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:44:56] 2026-01-09 11:44:20,542 | INFO     | time since job start (33211s) is within the limit (349056.0s)
[2026-01-09 06:44:56] 2026-01-09 11:44:21,577 | INFO     | monitor loop #2058: job 0:6963146932 is in state 'finished'
[2026-01-09 06:44:56] 2026-01-09 11:44:21,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,549 | INFO     | time since job start (33213s) is within the limit (349056.0s)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,822 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:44:56] 2026-01-09 11:44:22,825 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3268.2100312499997
[2026-01-09 06:44:56] 2026-01-09 11:44:22,832 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963146932/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,833 | INFO     | extracted standard info from prmon json
[2026-01-09 06:44:56] 2026-01-09 11:44:22,833 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:44:56] 2026-01-09 11:44:22,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:44:56] 2026-01-09 11:44:22,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:44:56] 2026-01-09 11:44:22,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:44:56] 2026-01-09 11:44:22,838 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:44:56] 2026-01-09 11:44:22,838 | INFO     | sum of square deviations: 49372412743.07903
[2026-01-09 06:44:56] 2026-01-09 11:44:22,842 | INFO     | sum of deviations: 76903803793.37617
[2026-01-09 06:44:56] 2026-01-09 11:44:22,842 | INFO     | mean x: 1767942504.201107
[2026-01-09 06:44:56] 2026-01-09 11:44:22,842 | INFO     | mean y: 2514259.372693727
[2026-01-09 06:44:56] 2026-01-09 11:44:22,842 | INFO     | intersect: -2751280742.8800774
[2026-01-09 06:44:56] 2026-01-09 11:44:22,842 | INFO     | chi2: 3.032050514114445
[2026-01-09 06:44:56] 2026-01-09 11:44:22,843 | INFO     | sum of square deviations: 48018660633.92189
[2026-01-09 06:44:56] 2026-01-09 11:44:22,846 | INFO     | sum of deviations: 110149155132.96643
[2026-01-09 06:44:56] 2026-01-09 11:44:22,846 | INFO     | mean x: 1767942351.7039106
[2026-01-09 06:44:56] 2026-01-09 11:44:22,846 | INFO     | mean y: 2517975.635009311
[2026-01-09 06:44:56] 2026-01-09 11:44:22,846 | INFO     | intersect: -4052933671.5608096
[2026-01-09 06:44:56] 2026-01-09 11:44:22,847 | INFO     | chi2: 2.350888176249758
[2026-01-09 06:44:56] 2026-01-09 11:44:22,847 | INFO     | current chi2=2.350888176249758 (change=22.465402033832223 %)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,847 | INFO     | right removable region: 536
[2026-01-09 06:44:56] 2026-01-09 11:44:22,847 | INFO     | sum of square deviations: 48018494713.0985
[2026-01-09 06:44:56] 2026-01-09 11:44:22,851 | INFO     | sum of deviations: -42876069719.54007
[2026-01-09 06:44:56] 2026-01-09 11:44:22,851 | INFO     | mean x: 1767942656.707635
[2026-01-09 06:44:56] 2026-01-09 11:44:22,851 | INFO     | mean y: 2527711.448789572
[2026-01-09 06:44:56] 2026-01-09 11:44:22,851 | INFO     | intersect: 1581136809.0902455
[2026-01-09 06:44:56] 2026-01-09 11:44:22,851 | INFO     | chi2: 0.7770340274244152
[2026-01-09 06:44:56] 2026-01-09 11:44:22,851 | INFO     | current chi2=0.7770340274244152 (change=74.37265560691493 %)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,852 | INFO     | sum of square deviations: 46689619532.42103
[2026-01-09 06:44:56] 2026-01-09 11:44:22,857 | INFO     | sum of deviations: -48695118430.36836
[2026-01-09 06:44:56] 2026-01-09 11:44:22,857 | INFO     | mean x: 1767942809.2105262
[2026-01-09 06:44:56] 2026-01-09 11:44:22,857 | INFO     | mean y: 2528373.780075188
[2026-01-09 06:44:56] 2026-01-09 11:44:22,857 | INFO     | intersect: 1846411132.6199524
[2026-01-09 06:44:56] 2026-01-09 11:44:22,857 | INFO     | chi2: 0.7599931974611703
[2026-01-09 06:44:56] 2026-01-09 11:44:22,857 | INFO     | current chi2=0.7599931974611703 (change=2.1930609679641697 %)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,858 | INFO     | left removable region: 20
[2026-01-09 06:44:56] 2026-01-09 11:44:22,858 | INFO     | sum of square deviations: 42602457816.254166
[2026-01-09 06:44:56] 2026-01-09 11:44:22,863 | INFO     | sum of deviations: 5175039077.331409
[2026-01-09 06:44:56] 2026-01-09 11:44:22,863 | INFO     | mean x: 1767942931.2189922
[2026-01-09 06:44:56] 2026-01-09 11:44:22,863 | INFO     | mean y: 2529850.5988372094
[2026-01-09 06:44:56] 2026-01-09 11:44:22,863 | INFO     | intersect: -212227095.93722454
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | chi2: 0.04330261734854842
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | current memory leak: 0.12 B/s (using 516 data points, chi2=0.04)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | could have reported an average CPU frequency of 3278 MHz (22 samples)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | ..............................
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | . Timing measurements:
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | . get job = 0 s
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | . initial setup = 10 s
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | . payload setup = 50 s
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | . stage-in = 0 s
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | . payload execution = 33072 s
[2026-01-09 06:44:56] 2026-01-09 11:44:22,864 | INFO     | . stage-out = 3 s
[2026-01-09 06:44:56] 2026-01-09 11:44:22,865 | INFO     | . log creation = 0 s
[2026-01-09 06:44:56] 2026-01-09 11:44:22,865 | INFO     | ..............................
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | 
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | job summary report
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | --------------------------------------------------
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | PanDA job id: 6963146932
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | task id: 47898826
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | errors: (none)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | pilot state: finished 
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | transexitcode: 0
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | exeerrorcode: 0
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | exeerrordiag: 
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | exitcode: 0
[2026-01-09 06:44:56] 2026-01-09 11:44:22,939 | INFO     | exitmsg: OK
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | cpuconsumptiontime: 47393 s
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | nevents: 400
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | neventsw: 0
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | pid: 974013
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | pgrp: 974013
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | corecount: 8
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | event service: False
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | sizes: {0: 2283743, 1: 2283799, 2: 2284026, 3: 2284026, 14: 2284054, 25: 2284082, 33: 2284500, 37: 2284556, 33126: 2324073, 33130: 2333071, 33131: 2333127, 33144: 
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | --------------------------------------------------
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | 
[2026-01-09 06:44:56] 2026-01-09 11:44:22,940 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,960 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,960 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:44:56] 2026-01-09 11:44:22,960 | INFO     | job 6963146932 has completed (purged errors)
[2026-01-09 06:44:56] 2026-01-09 11:44:22,960 | INFO     | overall cleanup function is called
[2026-01-09 06:44:56] 2026-01-09 11:44:23,970 | INFO     | --- collectZombieJob: --- 10, [974013]
[2026-01-09 06:44:56] 2026-01-09 11:44:23,970 | INFO     | zombie collector waiting for pid 974013
[2026-01-09 06:44:56] 2026-01-09 11:44:23,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:44:56] 2026-01-09 11:44:23,972 | INFO     | collected zombie processes
[2026-01-09 06:44:56] 2026-01-09 11:44:23,972 | INFO     | will attempt to kill all subprocesses of pid=974013
[2026-01-09 06:44:56] 2026-01-09 11:44:24,227 | INFO     | process IDs to be killed: [974013] (in reverse order)
[2026-01-09 06:44:56] 2026-01-09 11:44:24,315 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:44:56] 2026-01-09 11:44:24,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:44:56] 2026-01-09 11:44:24,325 | INFO     | did not find any defunct processes belonging to 974013
[2026-01-09 06:44:56] 2026-01-09 11:44:24,335 | INFO     | did not find any defunct processes belonging to 974013
[2026-01-09 06:44:56] 2026-01-09 11:44:24,335 | INFO     | ready for new job
[2026-01-09 06:44:56] 2026-01-09 11:44:24,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:44:56] 2026-01-09 11:44:24,358 | INFO     | ***************************************
[2026-01-09 06:44:56] 2026-01-09 11:44:24,358 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:44:56] 2026-01-09 11:44:24,358 | INFO     | ***************************************
[2026-01-09 06:44:56] 2026-01-09 11:44:24,358 | INFO     | 
[2026-01-09 06:44:56] 2026-01-09 11:44:24,365 | INFO     | architecture information:
[2026-01-09 06:44:56] 2026-01-09 11:44:24,370 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:44:56] 2026-01-09 11:44:24,391 | INFO     | cat /etc/os-release:
[2026-01-09 06:44:56] NAME="CentOS Linux"
[2026-01-09 06:44:56] VERSION="7 (Core)"
[2026-01-09 06:44:56] ID="centos"
[2026-01-09 06:44:56] ID_LIKE="rhel fedora"
[2026-01-09 06:44:56] VERSION_ID="7"
[2026-01-09 06:44:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:44:56] ANSI_COLOR="0;31"
[2026-01-09 06:44:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:44:56] HOME_URL="https://www.centos.org/"
[2026-01-09 06:44:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:44:56] 
[2026-01-09 06:44:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:44:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:44:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:44:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:44:56] 
[2026-01-09 06:44:56] 2026-01-09 11:44:24,391 | INFO     | ***************************************
[2026-01-09 06:44:56] 2026-01-09 11:44:24,894 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 06:44:56] 2026-01-09 11:44:24,936 | INFO     | sufficient remaining disk space (85016444928 B)
[2026-01-09 06:44:56] 2026-01-09 11:44:24,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:44:56] 2026-01-09 11:44:24,936 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:44:56] 2026-01-09 11:44:24,937 | INFO     | update_server=False
[2026-01-09 06:44:56] 2026-01-09 11:44:24,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:44:56] 2026-01-09 11:44:24,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:44:56] 2026-01-09 11:44:24,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:44:56] 2026-01-09 11:44:25,035 | INFO     | all data control threads have been joined
[2026-01-09 06:44:56] 2026-01-09 11:44:25,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:44:56] 2026-01-09 11:44:25,086 | INFO     | aborting loop
[2026-01-09 06:44:56] 2026-01-09 11:44:25,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:44:56] 2026-01-09 11:44:25,162 | INFO     | all payload control threads have been joined
[2026-01-09 06:44:56] 2026-01-09 11:44:25,943 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:25,944 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:26,011 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:26,040 | INFO     | [data] control thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:26,091 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:26,124 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:26,167 | INFO     | [payload] control thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:26,317 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:26,445 | INFO     | all job control threads have been joined
[2026-01-09 06:44:56] 2026-01-09 11:44:26,485 | INFO     | [job] validate thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:26,766 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:26,786 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:26,944 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:27,138 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:27,284 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:27,450 | INFO     | [job] control thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:29,109 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:44:56] 2026-01-09 11:44:45,076 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:44:56] 2026-01-09 11:44:45,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976921671488)>', '<ExcThread(monitor, started 139976574482176)>']
[2026-01-09 06:44:56] 2026-01-09 11:44:50,828 | INFO     | all workflow threads have been joined
[2026-01-09 06:44:56] 2026-01-09 11:44:50,828 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:44:56] 2026-01-09 11:44:50,828 | INFO     | traces error code: 0
[2026-01-09 06:44:56] 2026-01-09 11:44:50,828 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:44:56] 2026-01-09 11:44:55,974 | INFO     | PID=959306 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 06:44:56] 2026-01-09 11:44:55,974 | INFO     | .. there are 10 such processes running
[2026-01-09 06:44:56] 2026-01-09 11:44:55,974 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:44:56] 2026-01-09 11:44:55,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:44:56] 2026-01-09 11:44:55,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:44:56] 2026-01-09 11:44:55,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:44:56] 2026-01-09 11:44:55,979 | INFO     | [monitor] control thread has ended
[2026-01-09 06:44:56] 2026-01-09 11:44:56,131 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:44:56] 2026-01-09 11:44:56,135 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:44:56] 2026-01-09 11:44:56,139 [wrapper] pilotpid: 959306
[2026-01-09 06:44:56] 2026-01-09 11:44:56,144 [wrapper] Pilot exit status: 0
[2026-01-09 06:44:56] 2026-01-09 11:44:56,159 [wrapper] pandaids: 6963146932
[2026-01-09 06:44:56] 2026-01-09 11:44:56,244 [wrapper] cleanup supervisor_pilot 2206042 959307
[2026-01-09 06:44:56] 2026-01-09 11:44:56,252 [wrapper] Test setup, not cleaning
[2026-01-09 06:44:56] 2026-01-09 11:44:56,269 [wrapper] apfmon messages muted
[2026-01-09 06:44:56] 2026-01-09 11:44:56,277 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:44:56] 2026-01-09 11:44:56,279 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:44:56]  *** Error codes and diagnostics ***
[2026-01-09 06:44:56]     "exeErrorCode": 0,
[2026-01-09 06:44:56]     "exeErrorDiag": "",
[2026-01-09 06:44:56]     "pilotErrorCode": 0,
[2026-01-09 06:44:56]     "pilotErrorDiag": "",
[2026-01-09 06:44:56]  *** Listing of results directory ***
[2026-01-09 06:44:56] total 452892
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 06:44:56] -rwx------. 1 boincer umatlas     36322 Jan  8 10:06 runpilot2-wrapper.sh
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:07 queuedata.json
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas       100 Jan  8 21:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:44:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 21:29 run_atlas
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas       105 Jan  8 21:29 job.xml
[2026-01-09 06:44:56] -rw-r--r--. 2 boincer umatlas 226149076 Jan  8 21:29 EVNT.47898824._001074.pool.root.1
[2026-01-09 06:44:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 21:29 start_atlas.sh
[2026-01-09 06:44:56] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 21:29 shared
[2026-01-09 06:44:56] -rw-r--r--. 2 boincer umatlas    592395 Jan  8 21:29 input.tar.gz
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas         0 Jan  8 21:29 boinc_lockfile
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 21:29 pandaJob.out
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas        57 Jan  8 21:29 setup.sh.local
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas    989763 Jan  8 21:30 agis_schedconf.cvmfs.json
[2026-01-09 06:44:56] drwx------. 5 boincer umatlas      4096 Jan  8 21:30 pilot3
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas      6902 Jan  9 06:39 init_data.xml
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas 223900053 Jan  9 06:42 HITS.47898826._027235.pool.root.1
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas       531 Jan  9 06:42 boinc_task_state.xml
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas      1030 Jan  9 06:44 memory_monitor_summary.json
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas   1516240 Jan  9 06:44 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas    697991 Jan  9 06:44 log.47898826._027235.job.log.tgz.1
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas        95 Jan  9 06:44 pilot_heartbeat.json
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas      7773 Jan  9 06:44 heartbeat.json
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas        28 Jan  9 06:44 wrapper_checkpoint.txt
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 06:44 boinc_mmap_file
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas       822 Jan  9 06:44 pilotlog.txt
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas   4200568 Jan  9 06:44 log.47898826._027235.job.log.1
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas       357 Jan  9 06:44 output.list
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas       620 Jan  9 06:44 runtime_log
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas   4915200 Jan  9 06:44 result.tar.gz
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 06:44 runtime_log.err
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas       658 Jan  9 06:44 MwzKDm0l6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0mkKDmtk6vzm.diag
[2026-01-09 06:44:56] -rw-r--r--. 1 boincer umatlas     21448 Jan  9 06:44 stderr.txt
[2026-01-09 06:44:56] HITS file was successfully produced:
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas 223900053 Jan  9 06:42 shared/HITS.pool.root.1
[2026-01-09 06:44:56]  *** Contents of shared directory: ***
[2026-01-09 06:44:56] total 444912
[2026-01-09 06:44:56] -rw-r--r--. 2 boincer umatlas 226149076 Jan  8 21:29 ATLAS.root_0
[2026-01-09 06:44:56] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 21:29 start_atlas.sh
[2026-01-09 06:44:56] -rw-r--r--. 2 boincer umatlas    592395 Jan  8 21:29 input.tar.gz
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas 223900053 Jan  9 06:42 HITS.pool.root.1
[2026-01-09 06:44:56] -rw-------. 1 boincer umatlas   4915200 Jan  9 06:44 result.tar.gz
06:44:57 (954131): run_atlas exited; CPU time 47974.772269
06:44:57 (954131): called boinc_finish(0)

</stderr_txt>
]]>

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