Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:06:40 (916532): wrapper (7.7.26015): starting
05:06:40 (916532): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 05:06:40] Arguments: --nthreads 4
[2026-01-09 05:06:40] Threads: 4
[2026-01-09 05:06:40] Checking for CVMFS
[2026-01-09 05:06:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:06:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:06:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:06:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:06:40] 2.12.7.0 702796 1105 69028 154929 0 81 3734570 4097024 0 130560 0 677964 99.986 42424 27873 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-09 05:06:40] CVMFS is ok
[2026-01-09 05:06:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:06:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:06:40] Further information can be found at the LHC@home message board.
[2026-01-09 05:06:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:06:40] Checking for apptainer binary...
[2026-01-09 05:06:40] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 05:06:40] apptainer is not installed, using version from CVMFS
[2026-01-09 05:06:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:06:40] pckeatlas05
[2026-01-09 05:06:40] apptainer works
[2026-01-09 05:06:40] Set ATHENA_PROC_NUMBER=4
[2026-01-09 05:06:40] Set ATHENA_CORE_NUMBER=4
[2026-01-09 05:06:40] Starting ATLAS job with PandaID=6963147069
[2026-01-09 05:06:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:08:08]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:08:08] 2026-01-09 07:07:03,707 | INFO     | PID=920197 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 08:08:08] 2026-01-09 07:07:04,707 | INFO     | time since job start (10819s) is within the limit (349056.0s)
[2026-01-09 08:08:08] 2026-01-09 07:07:04,795 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 08:08:08] 2026-01-09 07:07:04,795 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3746.5717499999996
[2026-01-09 08:08:08] 2026-01-09 07:07:04,796 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6963147069/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:08:08] 2026-01-09 07:07:04,796 | INFO     | extracted standard info from prmon json
[2026-01-09 08:08:08] 2026-01-09 07:07:04,796 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:08:08] 2026-01-09 07:07:04,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:08:08] 2026-01-09 07:07:04,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:08:08] 2026-01-09 07:07:04,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:08:08] 2026-01-09 07:07:04,799 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:08:08] 2026-01-09 07:07:04,799 | INFO     | sum of square deviations: 1719429448.0
[2026-01-09 08:08:08] 2026-01-09 07:07:04,799 | INFO     | sum of deviations: 5855870924.0
[2026-01-09 08:08:08] 2026-01-09 07:07:04,799 | INFO     | mean x: 1767936993.0
[2026-01-09 08:08:08] 2026-01-09 07:07:04,800 | INFO     | mean y: 2388380.7966101696
[2026-01-09 08:08:08] 2026-01-09 07:07:04,800 | INFO     | intersect: -6018684972.817775
[2026-01-09 08:08:08] 2026-01-09 07:07:04,800 | INFO     | chi2: 1.156146012684223
[2026-01-09 08:08:08] 2026-01-09 07:07:04,800 | INFO     | sum of square deviations: 1577789583.0
[2026-01-09 08:08:08] 2026-01-09 07:07:04,800 | INFO     | sum of deviations: 5459156661.499999
[2026-01-09 08:08:08] 2026-01-09 07:07:04,801 | INFO     | mean x: 1767936840.5
[2026-01-09 08:08:08] 2026-01-09 07:07:04,801 | INFO     | mean y: 2387953.552325581
[2026-01-09 08:08:08] 2026-01-09 07:07:04,801 | INFO     | intersect: -6114678785.838637
[2026-01-09 08:08:08] 2026-01-09 07:07:04,801 | INFO     | chi2: 1.156319329148724
[2026-01-09 08:08:08] 2026-01-09 07:07:04,801 | INFO     | current chi2=1.156319329148724 (change=-0.014990880269408102 %)
[2026-01-09 08:08:08] 2026-01-09 07:07:04,801 | INFO     | right removable region: 171
[2026-01-09 08:08:08] 2026-01-09 07:07:04,801 | INFO     | sum of square deviations: 1577789583.0
[2026-01-09 08:08:08] 2026-01-09 07:07:04,802 | INFO     | sum of deviations: -4454229881.999999
[2026-01-09 08:08:08] 2026-01-09 07:07:04,802 | INFO     | mean x: 1767937145.5
[2026-01-09 08:08:08] 2026-01-09 07:07:04,802 | INFO     | mean y: 2399096.1627906975
[2026-01-09 08:08:08] 2026-01-09 07:07:04,802 | INFO     | intersect: 4993431200.716798
[2026-01-09 08:08:08] 2026-01-09 07:07:04,802 | INFO     | chi2: 0.0902939269540558
[2026-01-09 08:08:08] 2026-01-09 07:07:04,802 | INFO     | current chi2=0.0902939269540558 (change=92.19009312289019 %)
[2026-01-09 08:08:08] 2026-01-09 07:07:04,802 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 08:08:08] 2026-01-09 07:07:04,803 | INFO     | sum of deviations: 2800266244.0000005
[2026-01-09 08:08:08] 2026-01-09 07:07:04,803 | INFO     | mean x: 1767937298.0
[2026-01-09 08:08:08] 2026-01-09 07:07:04,803 | INFO     | mean y: 2390872.5329341316
[2026-01-09 08:08:08] 2026-01-09 07:07:04,803 | INFO     | intersect: -3425712572.1283712
[2026-01-09 08:08:08] 2026-01-09 07:07:04,803 | INFO     | chi2: 0.0010199995693554464
[2026-01-09 08:08:08] 2026-01-09 07:07:04,803 | INFO     | current chi2=0.0010199995693554464 (change=98.87035639741923 %)
[2026-01-09 08:08:08] 2026-01-09 07:07:04,803 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 08:08:08] 2026-01-09 07:07:04,804 | INFO     | sum of deviations: 2240151738.999999
[2026-01-09 08:08:08] 2026-01-09 07:07:04,804 | INFO     | mean x: 1767937450.5
[2026-01-09 08:08:08] 2026-01-09 07:07:04,804 | INFO     | mean y: 2391547.827160494
[2026-01-09 08:08:08] 2026-01-09 07:07:04,804 | INFO     | intersect: -3001867746.3324075
[2026-01-09 08:08:08] 2026-01-09 07:07:04,804 | INFO     | chi2: 0.0008229152602551458
[2026-01-09 08:08:08] 2026-01-09 07:07:04,804 | INFO     | current chi2=0.0008229152602551458 (change=19.321999246023335 %)
[2026-01-09 08:08:08] 2026-01-09 07:07:04,804 | INFO     | left removable region: 30
[2026-01-09 08:08:08] 2026-01-09 07:07:04,804 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 08:08:08] 2026-01-09 07:07:04,805 | INFO     | sum of deviations: 1290547659.0
[2026-01-09 08:08:08] 2026-01-09 07:07:04,805 | INFO     | mean x: 1767937725.0
[2026-01-09 08:08:08] 2026-01-09 07:07:04,805 | INFO     | mean y: 2391996.0992907803
[2026-01-09 08:08:08] 2026-01-09 07:07:04,805 | INFO     | intersect: -2622594621.884108
[2026-01-09 08:08:08] 2026-01-09 07:07:04,805 | INFO     | chi2: 0.0007861075226598285
[2026-01-09 08:08:08] 2026-01-09 07:07:04,805 | INFO     | current memory leak: 1.48 B/s (using 141 data points, chi2=0.00)
[2026-01-09 08:08:08] 2026-01-09 07:07:04,805 | INFO     | could have reported an average CPU frequency of 3721 MHz (9 samples)
[2026-01-09 08:08:08] 2026-01-09 07:07:04,806 | INFO     | ..............................
[2026-01-09 08:08:08] 2026-01-09 07:07:04,806 | INFO     | . Timing measurements:
[2026-01-09 08:08:08] 2026-01-09 07:07:04,806 | INFO     | . get job = 0 s
[2026-01-09 08:08:08] 2026-01-09 07:07:04,806 | INFO     | . initial setup = 1 s
[2026-01-09 08:08:08] 2026-01-09 07:07:04,806 | INFO     | . payload setup = 3 s
[2026-01-09 08:08:08] 2026-01-09 07:07:04,806 | INFO     | . stage-in = 0 s
[2026-01-09 08:08:08] 2026-01-09 07:07:04,806 | INFO     | . payload execution = 10795 s
[2026-01-09 08:08:08] 2026-01-09 07:07:04,806 | INFO     | . stage-out = 0 s
[2026-01-09 08:08:08] 2026-01-09 07:07:04,806 | INFO     | . log creation = 0 s
[2026-01-09 08:08:08] 2026-01-09 07:07:04,806 | INFO     | ..............................
[2026-01-09 08:08:08] 2026-01-09 07:07:05,115 | INFO     | 
[2026-01-09 08:08:08] 2026-01-09 07:07:05,115 | INFO     | job summary report
[2026-01-09 08:08:08] 2026-01-09 07:07:05,115 | INFO     | --------------------------------------------------
[2026-01-09 08:08:08] 2026-01-09 07:07:05,115 | INFO     | PanDA job id: 6963147069
[2026-01-09 08:08:08] 2026-01-09 07:07:05,115 | INFO     | task id: 47898826
[2026-01-09 08:08:08] 2026-01-09 07:07:05,115 | INFO     | errors: (none)
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | pilot state: finished 
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | transexitcode: 0
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | exeerrorcode: 0
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | exeerrordiag: 
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | exitcode: 0
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | exitmsg: OK
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | cpuconsumptiontime: 42104 s
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | nevents: 400
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | neventsw: 0
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | pid: 927371
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | pgrp: 927371
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | corecount: 4
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | event service: False
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | sizes: {0: 2283970, 1: 2283970, 3: 2284260, 11: 2284288, 10803: 2322461, 10806: 2322663}
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | --------------------------------------------------
[2026-01-09 08:08:08] 2026-01-09 07:07:05,116 | INFO     | 
[2026-01-09 08:08:08] 2026-01-09 07:07:05,117 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-09 08:08:08] 2026-01-09 07:07:05,126 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,126 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,126 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:08:08] 2026-01-09 07:07:05,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,128 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:08:08] 2026-01-09 07:07:05,128 | INFO     | job 6963147069 has completed (purged errors)
[2026-01-09 08:08:08] 2026-01-09 07:07:05,128 | INFO     | overall cleanup function is called
[2026-01-09 08:08:08] 2026-01-09 07:07:06,134 | INFO     | --- collectZombieJob: --- 10, [927371]
[2026-01-09 08:08:08] 2026-01-09 07:07:06,134 | INFO     | zombie collector waiting for pid 927371
[2026-01-09 08:08:08] 2026-01-09 07:07:06,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:08:08] 2026-01-09 07:07:06,134 | INFO     | collected zombie processes
[2026-01-09 08:08:08] 2026-01-09 07:07:06,134 | INFO     | will attempt to kill all subprocesses of pid=927371
[2026-01-09 08:08:08] 2026-01-09 07:07:06,177 | INFO     | process IDs to be killed: [927371] (in reverse order)
[2026-01-09 08:08:08] 2026-01-09 07:07:06,196 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:08:08] 2026-01-09 07:07:06,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:08:08] 2026-01-09 07:07:06,197 | INFO     | did not find any defunct processes belonging to 927371
[2026-01-09 08:08:08] 2026-01-09 07:07:06,198 | INFO     | did not find any defunct processes belonging to 927371
[2026-01-09 08:08:08] 2026-01-09 07:07:06,199 | INFO     | ready for new job
[2026-01-09 08:08:08] 2026-01-09 07:07:06,199 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:08:08] 2026-01-09 07:07:06,200 | INFO     | ***************************************
[2026-01-09 08:08:08] 2026-01-09 07:07:06,200 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:08:08] 2026-01-09 07:07:06,200 | INFO     | ***************************************
[2026-01-09 08:08:08] 2026-01-09 07:07:06,200 | INFO     | 
[2026-01-09 08:08:08] 2026-01-09 07:07:06,200 | INFO     | architecture information:
[2026-01-09 08:08:08] 2026-01-09 07:07:06,200 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:08:08] 2026-01-09 07:07:06,206 | INFO     | cat /etc/os-release:
[2026-01-09 08:08:08] NAME="CentOS Linux"
[2026-01-09 08:08:08] VERSION="7 (Core)"
[2026-01-09 08:08:08] ID="centos"
[2026-01-09 08:08:08] ID_LIKE="rhel fedora"
[2026-01-09 08:08:08] VERSION_ID="7"
[2026-01-09 08:08:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:08:08] ANSI_COLOR="0;31"
[2026-01-09 08:08:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:08:08] HOME_URL="https://www.centos.org/"
[2026-01-09 08:08:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:08:08] 
[2026-01-09 08:08:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:08:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:08:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:08:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:08:08] 
[2026-01-09 08:08:08] 2026-01-09 07:07:06,206 | INFO     | ***************************************
[2026-01-09 08:08:08] 2026-01-09 07:07:06,709 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-09 08:08:08] 2026-01-09 07:07:06,716 | INFO     | sufficient remaining disk space (43887099904 B)
[2026-01-09 08:08:08] 2026-01-09 07:07:06,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:08:08] 2026-01-09 07:07:06,716 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:08:08] 2026-01-09 07:07:06,716 | INFO     | update_server=False
[2026-01-09 08:08:08] 2026-01-09 07:07:06,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:08:08] 2026-01-09 07:07:06,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:08:08] 2026-01-09 07:07:06,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:08:08] 2026-01-09 07:07:06,954 | INFO     | aborting loop
[2026-01-09 08:08:08] 2026-01-09 07:07:07,134 | INFO     | all payload control threads have been joined
[2026-01-09 08:08:08] 2026-01-09 07:07:07,270 | INFO     | all job control threads have been joined
[2026-01-09 08:08:08] 2026-01-09 07:07:07,313 | INFO     | all data control threads have been joined
[2026-01-09 08:08:08] 2026-01-09 07:07:07,368 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:08:08] 2026-01-09 07:07:07,719 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:07,721 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:07,739 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:07,844 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:07,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:08:08] 2026-01-09 07:07:07,959 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:08,139 | INFO     | [payload] control thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:08,139 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:08,273 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:08,276 | INFO     | [job] control thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:08,319 | INFO     | [data] control thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:08,423 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:08,782 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:09,114 | INFO     | [job] validate thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:09,373 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:11,917 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:17,553 | INFO     | job.realtimelogging is not enabled
[2026-01-09 08:08:08] 2026-01-09 07:07:18,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:08:08] 2026-01-09 07:07:37,840 | INFO     | PID=920197 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 08:08:08] 2026-01-09 07:07:37,840 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:08:08] 2026-01-09 07:07:37,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:08:08] 2026-01-09 07:07:37,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:08:08] 2026-01-09 07:08:02,998 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:08:08] 2026-01-09 07:08:03,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817562314560)>', '<ExcThread(monitor, started 139816737953536)>']
[2026-01-09 08:08:08] 2026-01-09 07:08:03,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:08:08] 2026-01-09 07:08:03,973 | INFO     | [monitor] control thread has ended
[2026-01-09 08:08:08] 2026-01-09 07:08:08,355 | INFO     | all workflow threads have been joined
[2026-01-09 08:08:08] 2026-01-09 07:08:08,356 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:08:08] 2026-01-09 07:08:08,356 | INFO     | traces error code: 0
[2026-01-09 08:08:08] 2026-01-09 07:08:08,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:08:08] 2026-01-09 07:08:08,450 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:08:08] 2026-01-09 07:08:08,452 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:08:08] 2026-01-09 07:08:08,453 [wrapper] pilotpid: 920197
[2026-01-09 08:08:08] 2026-01-09 07:08:08,454 [wrapper] Pilot exit status: 0
[2026-01-09 08:08:08] 2026-01-09 07:08:08,458 [wrapper] pandaids: 6963147069
[2026-01-09 08:08:08] 2026-01-09 07:08:08,474 [wrapper] cleanup supervisor_pilot  947588 920198
[2026-01-09 08:08:08] 2026-01-09 07:08:08,475 [wrapper] Test setup, not cleaning
[2026-01-09 08:08:08] 2026-01-09 07:08:08,476 [wrapper] apfmon messages muted
[2026-01-09 08:08:08] 2026-01-09 07:08:08,478 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:08:08] 2026-01-09 07:08:08,479 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:08:08]  *** Error codes and diagnostics ***
[2026-01-09 08:08:08]     "exeErrorCode": 0,
[2026-01-09 08:08:08]     "exeErrorDiag": "",
[2026-01-09 08:08:08]     "pilotErrorCode": 0,
[2026-01-09 08:08:08]     "pilotErrorDiag": "",
[2026-01-09 08:08:08]  *** Listing of results directory ***
[2026-01-09 08:08:08] total 444252
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 08:08:08] -rwx------ 1 boinc boinc     36322 Jan  8 16:06 runpilot2-wrapper.sh
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc      5112 Jan  8 16:07 queuedata.json
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc       100 Jan  9 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:08:08] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 05:06 run_atlas
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc       105 Jan  9 05:06 job.xml
[2026-01-09 08:08:08] -rw-r--r-- 2 boinc boinc     15847 Jan  9 05:06 start_atlas.sh
[2026-01-09 08:08:08] drwxrwx--x 2 boinc boinc        68 Jan  9 05:06 shared
[2026-01-09 08:08:08] -rw-r--r-- 2 boinc boinc    592388 Jan  9 05:06 input.tar.gz
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc      6311 Jan  9 05:06 init_data.xml
[2026-01-09 08:08:08] -rw-r--r-- 2 boinc boinc 227300009 Jan  9 05:06 EVNT.47898824._001079.pool.root.1
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc         0 Jan  9 05:06 boinc_lockfile
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc      2519 Jan  9 05:06 pandaJob.out
[2026-01-09 08:08:08] -rw------- 1 boinc boinc    989771 Jan  9 05:06 agis_schedconf.cvmfs.json
[2026-01-09 08:08:08] drwx------ 5 boinc boinc      4096 Jan  9 05:06 pilot3
[2026-01-09 08:08:08] -rw------- 1 boinc boinc 219919545 Jan  9 08:06 HITS.47898826._027371.pool.root.1
[2026-01-09 08:08:08] -rw------- 1 boinc boinc        95 Jan  9 08:06 pilot_heartbeat.json
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc       530 Jan  9 08:06 boinc_task_state.xml
[2026-01-09 08:08:08] -rw------- 1 boinc boinc      1015 Jan  9 08:06 memory_monitor_summary.json
[2026-01-09 08:08:08] -rw------- 1 boinc boinc   1516240 Jan  9 08:07 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:08:08] -rw------- 1 boinc boinc    363719 Jan  9 08:07 log.47898826._027371.job.log.tgz.1
[2026-01-09 08:08:08] -rw------- 1 boinc boinc      7762 Jan  9 08:07 heartbeat.json
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc      8192 Jan  9 08:07 boinc_mmap_file
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc        28 Jan  9 08:07 wrapper_checkpoint.txt
[2026-01-09 08:08:08] -rw------- 1 boinc boinc      4819 Jan  9 08:08 pilotlog.txt
[2026-01-09 08:08:08] -rw------- 1 boinc boinc   1532033 Jan  9 08:08 log.47898826._027371.job.log.1
[2026-01-09 08:08:08] -rw------- 1 boinc boinc       357 Jan  9 08:08 output.list
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc       620 Jan  9 08:08 runtime_log
[2026-01-09 08:08:08] -rw------- 1 boinc boinc   1914880 Jan  9 08:08 result.tar.gz
[2026-01-09 08:08:08] -rw------- 1 boinc boinc       653 Jan  9 08:08 VCyLDmBm6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmubfKDmUpWwXo.diag
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc      8831 Jan  9 08:08 runtime_log.err
[2026-01-09 08:08:08] -rw-r--r-- 1 boinc boinc     21251 Jan  9 08:08 stderr.txt
[2026-01-09 08:08:08] HITS file was successfully produced:
[2026-01-09 08:08:08] -rw------- 1 boinc boinc 219919545 Jan  9 08:06 shared/HITS.pool.root.1
[2026-01-09 08:08:08]  *** Contents of shared directory: ***
[2026-01-09 08:08:08] total 439212
[2026-01-09 08:08:08] -rw-r--r-- 2 boinc boinc     15847 Jan  9 05:06 start_atlas.sh
[2026-01-09 08:08:08] -rw-r--r-- 2 boinc boinc    592388 Jan  9 05:06 input.tar.gz
[2026-01-09 08:08:08] -rw-r--r-- 2 boinc boinc 227300009 Jan  9 05:06 ATLAS.root_0
[2026-01-09 08:08:08] -rw------- 1 boinc boinc 219919545 Jan  9 08:06 HITS.pool.root.1
[2026-01-09 08:08:08] -rw------- 1 boinc boinc   1914880 Jan  9 08:08 result.tar.gz
08:08:09 (916532): run_atlas exited; CPU time 42176.061681
08:08:09 (916532): called boinc_finish(0)

</stderr_txt>
]]>

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