Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:20:19 (3659): wrapper (7.7.26015): starting
21:20:19 (3659): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 21:20:19] Arguments: --nthreads 12
[2026-01-08 21:20:19] Threads: 12
[2026-01-08 21:20:19] Checking for CVMFS
[2026-01-08 21:20:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:20:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:20:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:20:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:20:20] 2.11.2.0 3165 136054 95304 154927 1 1 18844967 20275200 1 130560 0 50108321 99.887 8095265 40724 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 21:20:20] CVMFS is ok
[2026-01-08 21:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 21:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 21:20:20] Further information can be found at the LHC@home message board.
[2026-01-08 21:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:20:20] Checking for apptainer binary...
[2026-01-08 21:20:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:20:20] Running /usr/bin/apptainer --version
[2026-01-08 21:20:20] apptainer version 1.3.2-1.el7
[2026-01-08 21:20:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:20:21] c-115-40.aglt2.org
[2026-01-08 21:20:21] apptainer works
[2026-01-08 21:20:21] Set ATHENA_PROC_NUMBER=12
[2026-01-08 21:20:21] Set ATHENA_CORE_NUMBER=12
[2026-01-08 21:20:21] Starting ATLAS job with PandaID=6963147073
[2026-01-08 21:20:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 22:51:51]  *** The last 200 lines of the pilot log: ***
[2026-01-08 22:51:51]  replicas=None
[2026-01-08 22:51:51]  scope=mc23_13p6TeV
[2026-01-08 22:51:51]  status=None
[2026-01-08 22:51:51]  status_code=0
[2026-01-08 22:51:51]  storage_token=
[2026-01-08 22:51:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963147073/log.47898826._027375.job.log.tgz.1
[2026-01-08 22:51:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/0d/log.47898826._027375.job.log.tgz.1
[2026-01-08 22:51:51]  workdir=None
[2026-01-08 22:51:51] ]
[2026-01-08 22:51:51] 2026-01-09 03:51:10,586 | INFO     | transferring file log.47898826._027375.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963147073/log.47898826._027375.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-08 22:51:51] 2026-01-09 03:51:10,586 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963147073/log.47898826._027375.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._027375.job
[2026-01-08 22:51:51] 2026-01-09 03:51:10,606 | INFO     | adding to output.list: log.47898826._027375.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/0d/log.47898826._027375.job.log.tg
[2026-01-08 22:51:51] 2026-01-09 03:51:10,607 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 22:51:51] 2026-01-09 03:51:10,607 | INFO     | summary of transferred files:
[2026-01-08 22:51:51] 2026-01-09 03:51:10,607 | INFO     |  -- lfn=log.47898826._027375.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 22:51:51] 2026-01-09 03:51:10,608 | INFO     | stage-out finished correctly
[2026-01-08 22:51:51] 2026-01-09 03:51:10,962 | INFO     | monitor loop #407: job 0:6963147073 is in state 'finished'
[2026-01-08 22:51:51] 2026-01-09 03:51:10,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:51:51] 2026-01-09 03:51:12,064 | INFO     | time since job start (5436s) is within the limit (349056.0s)
[2026-01-08 22:51:51] 2026-01-09 03:51:13,310 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 22:51:51] 2026-01-09 03:51:13,466 | INFO     | monitor loop #408: job 0:6963147073 is in state 'finished'
[2026-01-08 22:51:51] 2026-01-09 03:51:13,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:51:51] 2026-01-09 03:51:13,809 | INFO     | job 6963147073 has state=finished
[2026-01-08 22:51:51] 2026-01-09 03:51:13,809 | INFO     | preparing for final server update for job 6963147073 in state='finished'
[2026-01-08 22:51:51] 2026-01-09 03:51:13,810 | INFO     | this job has now completed (state=finished)
[2026-01-08 22:51:51] 2026-01-09 03:51:13,810 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 22:51:51] 2026-01-09 03:51:13,810 | INFO     | log transfer has been attempted: DONE
[2026-01-08 22:51:51] 2026-01-09 03:51:13,811 | INFO     | job 6963147073 has finished - writing final server update
[2026-01-08 22:51:51] 2026-01-09 03:51:13,811 | INFO     | total number of processed events: 400 (read)
[2026-01-08 22:51:51] 2026-01-09 03:51:13,812 | INFO     | executing command: lscpu
[2026-01-08 22:51:51] 2026-01-09 03:51:13,846 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 22:51:51] 2026-01-09 03:51:14,070 | INFO     | time since job start (5438s) is within the limit (349056.0s)
[2026-01-08 22:51:51] 2026-01-09 03:51:15,978 | INFO     | monitor loop #409: job 0:6963147073 is in state 'finished'
[2026-01-08 22:51:51] 2026-01-09 03:51:15,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:51:51] 2026-01-09 03:51:16,072 | INFO     | time since job start (5440s) is within the limit (349056.0s)
[2026-01-08 22:51:51] 2026-01-09 03:51:17,186 | INFO     | PID=7419 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 22:51:51] 2026-01-09 03:51:18,186 | INFO     | time since job start (5442s) is within the limit (349056.0s)
[2026-01-08 22:51:51] 2026-01-09 03:51:18,459 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 22:51:51] 2026-01-09 03:51:18,463 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2026-01-08 22:51:51] 2026-01-09 03:51:18,465 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963147073/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 22:51:51] 2026-01-09 03:51:18,465 | INFO     | extracted standard info from prmon json
[2026-01-08 22:51:51] 2026-01-09 03:51:18,466 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 22:51:51] 2026-01-09 03:51:18,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 22:51:51] 2026-01-09 03:51:18,466 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 22:51:51] 2026-01-09 03:51:18,466 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 22:51:51] 2026-01-09 03:51:18,481 | INFO     | monitor loop #410: job 0:6963147073 is in state 'finished'
[2026-01-08 22:51:51] 2026-01-09 03:51:18,489 | INFO     | fitting pss+swap vs Time
[2026-01-08 22:51:51] 2026-01-09 03:51:18,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:51:51] 2026-01-09 03:51:18,490 | INFO     | sum of square deviations: 170944600.5
[2026-01-08 22:51:51] 2026-01-09 03:51:18,490 | INFO     | sum of deviations: -13092457205.999998
[2026-01-08 22:51:51] 2026-01-09 03:51:18,491 | INFO     | mean x: 1767928039.5
[2026-01-08 22:51:51] 2026-01-09 03:51:18,491 | INFO     | mean y: 2827078.56097561
[2026-01-08 22:51:51] 2026-01-09 03:51:18,491 | INFO     | intersect: 135406473246.61427
[2026-01-08 22:51:51] 2026-01-09 03:51:18,491 | INFO     | chi2: 0.06442635693016294
[2026-01-08 22:51:51] 2026-01-09 03:51:18,492 | INFO     | current memory leak: -76.59 B/s (using 82 data points, chi2=0.06)
[2026-01-08 22:51:51] 2026-01-09 03:51:18,492 | INFO     | could have reported an average CPU frequency of 2154 MHz (6 samples)
[2026-01-08 22:51:51] 2026-01-09 03:51:18,492 | INFO     | ..............................
[2026-01-08 22:51:51] 2026-01-09 03:51:18,492 | INFO     | . Timing measurements:
[2026-01-08 22:51:51] 2026-01-09 03:51:18,493 | INFO     | . get job = 0 s
[2026-01-08 22:51:51] 2026-01-09 03:51:18,493 | INFO     | . initial setup = 2 s
[2026-01-08 22:51:51] 2026-01-09 03:51:18,493 | INFO     | . payload setup = 6 s
[2026-01-08 22:51:51] 2026-01-09 03:51:18,493 | INFO     | . stage-in = 0 s
[2026-01-08 22:51:51] 2026-01-09 03:51:18,493 | INFO     | . payload execution = 5406 s
[2026-01-08 22:51:51] 2026-01-09 03:51:18,493 | INFO     | . stage-out = 0 s
[2026-01-08 22:51:51] 2026-01-09 03:51:18,493 | INFO     | . log creation = 0 s
[2026-01-08 22:51:51] 2026-01-09 03:51:18,493 | INFO     | ..............................
[2026-01-08 22:51:51] 2026-01-09 03:51:18,568 | INFO     | 
[2026-01-08 22:51:51] 2026-01-09 03:51:18,568 | INFO     | job summary report
[2026-01-08 22:51:51] 2026-01-09 03:51:18,568 | INFO     | --------------------------------------------------
[2026-01-08 22:51:51] 2026-01-09 03:51:18,569 | INFO     | PanDA job id: 6963147073
[2026-01-08 22:51:51] 2026-01-09 03:51:18,569 | INFO     | task id: 47898826
[2026-01-08 22:51:51] 2026-01-09 03:51:18,569 | INFO     | errors: (none)
[2026-01-08 22:51:51] 2026-01-09 03:51:18,569 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 22:51:51] 2026-01-09 03:51:18,569 | INFO     | pilot state: finished 
[2026-01-08 22:51:51] 2026-01-09 03:51:18,569 | INFO     | transexitcode: 0
[2026-01-08 22:51:51] 2026-01-09 03:51:18,570 | INFO     | exeerrorcode: 0
[2026-01-08 22:51:51] 2026-01-09 03:51:18,570 | INFO     | exeerrordiag: 
[2026-01-08 22:51:51] 2026-01-09 03:51:18,570 | INFO     | exitcode: 0
[2026-01-08 22:51:51] 2026-01-09 03:51:18,570 | INFO     | exitmsg: OK
[2026-01-08 22:51:51] 2026-01-09 03:51:18,570 | INFO     | cpuconsumptiontime: 59740 s
[2026-01-08 22:51:51] 2026-01-09 03:51:18,570 | INFO     | nevents: 400
[2026-01-08 22:51:51] 2026-01-09 03:51:18,571 | INFO     | neventsw: 0
[2026-01-08 22:51:51] 2026-01-09 03:51:18,571 | INFO     | pid: 13809
[2026-01-08 22:51:51] 2026-01-09 03:51:18,571 | INFO     | pgrp: 13809
[2026-01-08 22:51:51] 2026-01-09 03:51:18,571 | INFO     | corecount: 12
[2026-01-08 22:51:51] 2026-01-09 03:51:18,571 | INFO     | event service: False
[2026-01-08 22:51:51] 2026-01-09 03:51:18,571 | INFO     | sizes: {0: 2283797, 1: 2283996, 5: 2284258, 11: 2284314, 5416: 2310818, 5417: 2310817, 5418: 2319999, 5421: 2320055, 5426: 2320249}
[2026-01-08 22:51:51] 2026-01-09 03:51:18,572 | INFO     | --------------------------------------------------
[2026-01-08 22:51:51] 2026-01-09 03:51:18,572 | INFO     | 
[2026-01-08 22:51:51] 2026-01-09 03:51:18,572 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 22:51:51] 2026-01-09 03:51:18,594 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,594 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,594 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,595 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,595 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,595 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,597 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 22:51:51] 2026-01-09 03:51:18,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,597 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 22:51:51] 2026-01-09 03:51:18,597 | INFO     | job 6963147073 has completed (purged errors)
[2026-01-08 22:51:51] 2026-01-09 03:51:18,597 | INFO     | overall cleanup function is called
[2026-01-08 22:51:51] 2026-01-09 03:51:19,605 | INFO     | --- collectZombieJob: --- 10, [13809]
[2026-01-08 22:51:51] 2026-01-09 03:51:19,605 | INFO     | zombie collector waiting for pid 13809
[2026-01-08 22:51:51] 2026-01-09 03:51:19,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 22:51:51] 2026-01-09 03:51:19,606 | INFO     | collected zombie processes
[2026-01-08 22:51:51] 2026-01-09 03:51:19,606 | INFO     | will attempt to kill all subprocesses of pid=13809
[2026-01-08 22:51:51] 2026-01-09 03:51:19,693 | INFO     | process IDs to be killed: [13809] (in reverse order)
[2026-01-08 22:51:51] 2026-01-09 03:51:19,742 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 22:51:51] 2026-01-09 03:51:19,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 22:51:51] 2026-01-09 03:51:19,745 | INFO     | did not find any defunct processes belonging to 13809
[2026-01-08 22:51:51] 2026-01-09 03:51:19,747 | INFO     | did not find any defunct processes belonging to 13809
[2026-01-08 22:51:51] 2026-01-09 03:51:19,747 | INFO     | ready for new job
[2026-01-08 22:51:51] 2026-01-09 03:51:19,747 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 22:51:51] 2026-01-09 03:51:19,749 | INFO     | ***************************************
[2026-01-08 22:51:51] 2026-01-09 03:51:19,749 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 22:51:51] 2026-01-09 03:51:19,749 | INFO     | ***************************************
[2026-01-08 22:51:51] 2026-01-09 03:51:19,749 | INFO     | 
[2026-01-08 22:51:51] 2026-01-09 03:51:19,750 | INFO     | architecture information:
[2026-01-08 22:51:51] 2026-01-09 03:51:19,750 | INFO     | executing command: cat /etc/os-release
[2026-01-08 22:51:51] 2026-01-09 03:51:19,764 | INFO     | cat /etc/os-release:
[2026-01-08 22:51:51] NAME="CentOS Linux"
[2026-01-08 22:51:51] VERSION="7 (Core)"
[2026-01-08 22:51:51] ID="centos"
[2026-01-08 22:51:51] ID_LIKE="rhel fedora"
[2026-01-08 22:51:51] VERSION_ID="7"
[2026-01-08 22:51:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 22:51:51] ANSI_COLOR="0;31"
[2026-01-08 22:51:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 22:51:51] HOME_URL="https://www.centos.org/"
[2026-01-08 22:51:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 22:51:51] 
[2026-01-08 22:51:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 22:51:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 22:51:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 22:51:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 22:51:51] 
[2026-01-08 22:51:51] 2026-01-09 03:51:19,764 | INFO     | ***************************************
[2026-01-08 22:51:51] 2026-01-09 03:51:20,267 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 22:51:51] 2026-01-09 03:51:20,283 | INFO     | sufficient remaining disk space (18661507072 B)
[2026-01-08 22:51:51] 2026-01-09 03:51:20,284 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 22:51:51] 2026-01-09 03:51:20,284 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 22:51:51] 2026-01-09 03:51:20,284 | INFO     | update_server=False
[2026-01-08 22:51:51] 2026-01-09 03:51:20,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 22:51:51] 2026-01-09 03:51:20,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 22:51:51] 2026-01-09 03:51:20,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:51:51] 2026-01-09 03:51:20,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:51:51] 2026-01-09 03:51:20,286 | INFO     | aborting loop
[2026-01-08 22:51:51] 2026-01-09 03:51:20,523 | INFO     | all payload control threads have been joined
[2026-01-08 22:51:51] 2026-01-09 03:51:20,711 | INFO     | all data control threads have been joined
[2026-01-08 22:51:51] 2026-01-09 03:51:21,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 22:51:51] 2026-01-09 03:51:21,290 | INFO     | [job] retrieve thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:21,291 | INFO     | [job] queue monitor thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:21,291 | INFO     | [job] job monitor thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:21,376 | INFO     | [data] copytool_in thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:21,529 | INFO     | [payload] control thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:21,606 | INFO     | [job] validate thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:21,635 | INFO     | [payload] validate_post thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:21,717 | INFO     | [data] control thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:21,728 | INFO     | all job control threads have been joined
[2026-01-08 22:51:51] 2026-01-09 03:51:21,818 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:22,017 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:22,403 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:22,422 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:22,656 | INFO     | [payload] failed_post thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:22,733 | INFO     | [job] control thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:23,195 | INFO     | [data] copytool_out thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:24,290 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 22:51:51] 2026-01-09 03:51:44,742 | INFO     | [monitor] cgroup control has ended
[2026-01-08 22:51:51] 2026-01-09 03:51:45,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415568779072)>', '<ExcThread(monitor, started 140414677931776)>']
[2026-01-08 22:51:51] 2026-01-09 03:51:50,864 | INFO     | all workflow threads have been joined
[2026-01-08 22:51:51] 2026-01-09 03:51:50,865 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 22:51:51] 2026-01-09 03:51:50,865 | INFO     | traces error code: 0
[2026-01-08 22:51:51] 2026-01-09 03:51:50,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 22:51:51] 2026-01-09 03:51:51,391 | INFO     | PID=7419 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 22:51:51] 2026-01-09 03:51:51,392 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 22:51:51] 2026-01-09 03:51:51,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 22:51:51] 2026-01-09 03:51:51,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 22:51:51] 2026-01-09 03:51:51,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 22:51:51] 2026-01-09 03:51:51,392 | INFO     | [monitor] control thread has ended
[2026-01-08 22:51:51] 2026-01-09 03:51:51,495 [wrapper] ==== pilot stdout END ====
[2026-01-08 22:51:51] 2026-01-09 03:51:51,499 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 22:51:51] 2026-01-09 03:51:51,503 [wrapper] pilotpid: 7419
[2026-01-08 22:51:51] 2026-01-09 03:51:51,506 [wrapper] Pilot exit status: 0
[2026-01-08 22:51:51] 2026-01-09 03:51:51,521 [wrapper] pandaids: 6963147073
[2026-01-08 22:51:51] 2026-01-09 03:51:51,563 [wrapper] cleanup supervisor_pilot 24124 7420
[2026-01-08 22:51:51] 2026-01-09 03:51:51,567 [wrapper] Test setup, not cleaning
[2026-01-08 22:51:51] 2026-01-09 03:51:51,571 [wrapper] apfmon messages muted
[2026-01-08 22:51:51] 2026-01-09 03:51:51,575 [wrapper] ==== wrapper stdout END ====
[2026-01-08 22:51:51] 2026-01-09 03:51:51,578 [wrapper] ==== wrapper stderr END ====
[2026-01-08 22:51:51]  *** Error codes and diagnostics ***
[2026-01-08 22:51:51]     "exeErrorCode": 0,
[2026-01-08 22:51:51]     "exeErrorDiag": "",
[2026-01-08 22:51:51]     "pilotErrorCode": 0,
[2026-01-08 22:51:51]     "pilotErrorDiag": "",
[2026-01-08 22:51:51]  *** Listing of results directory ***
[2026-01-08 22:51:51] total 433628
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-08 22:51:51] -rwx------ 1 boincer umatlas     36322 Jan  8 10:06 runpilot2-wrapper.sh
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 10:07 queuedata.json
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas       100 Jan  8 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 22:51:51] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 21:20 run_atlas
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas       105 Jan  8 21:20 job.xml
[2026-01-08 22:51:51] -rw-r--r-- 2 boincer umatlas 225348838 Jan  8 21:20 EVNT.47898824._001080.pool.root.1
[2026-01-08 22:51:51] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 21:20 start_atlas.sh
[2026-01-08 22:51:51] drwxrwx--x 2 boincer umatlas      4096 Jan  8 21:20 shared
[2026-01-08 22:51:51] -rw-r--r-- 2 boincer umatlas    592396 Jan  8 21:20 input.tar.gz
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas         0 Jan  8 21:20 boinc_lockfile
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas      2518 Jan  8 21:20 pandaJob.out
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas        57 Jan  8 21:20 setup.sh.local
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas    989763 Jan  8 21:20 agis_schedconf.cvmfs.json
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas   1516240 Jan  8 21:20 agis_ddmendpoints.agis.ALL.json
[2026-01-08 22:51:51] drwx------ 5 boincer umatlas      4096 Jan  8 21:20 pilot3
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas      5952 Jan  8 22:45 init_data.xml
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas 212451234 Jan  8 22:50 HITS.47898826._027375.pool.root.1
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas       530 Jan  8 22:50 boinc_task_state.xml
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas      1048 Jan  8 22:51 memory_monitor_summary.json
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas    383963 Jan  8 22:51 log.47898826._027375.job.log.tgz.1
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 22:51 boinc_mmap_file
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas        27 Jan  8 22:51 wrapper_checkpoint.txt
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas      7853 Jan  8 22:51 heartbeat.json
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas       744 Jan  8 22:51 pilotlog.txt
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas        95 Jan  8 22:51 pilot_heartbeat.json
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas    779388 Jan  8 22:51 log.47898826._027375.job.log.1
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas       357 Jan  8 22:51 output.list
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas       620 Jan  8 22:51 runtime_log
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas   1177600 Jan  8 22:51 result.tar.gz
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas      9344 Jan  8 22:51 runtime_log.err
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas       659 Jan  8 22:51 IC2LDmBm6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxbfKDmcNiEAo.diag
[2026-01-08 22:51:51] -rw-r--r-- 1 boincer umatlas     22032 Jan  8 22:51 stderr.txt
[2026-01-08 22:51:51] HITS file was successfully produced:
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas 212451234 Jan  8 22:50 shared/HITS.pool.root.1
[2026-01-08 22:51:51]  *** Contents of shared directory: ***
[2026-01-08 22:51:51] total 429296
[2026-01-08 22:51:51] -rw-r--r-- 2 boincer umatlas 225348838 Jan  8 21:20 ATLAS.root_0
[2026-01-08 22:51:51] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 21:20 start_atlas.sh
[2026-01-08 22:51:51] -rw-r--r-- 2 boincer umatlas    592396 Jan  8 21:20 input.tar.gz
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas 212451234 Jan  8 22:50 HITS.pool.root.1
[2026-01-08 22:51:51] -rw------- 1 boincer umatlas   1177600 Jan  8 22:51 result.tar.gz
22:51:52 (3659): run_atlas exited; CPU time 59683.246351
22:51:52 (3659): called boinc_finish(0)

</stderr_txt>
]]>

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