Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:13:48 (3185226): wrapper (7.7.26015): starting
21:13:48 (3185226): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 21:13:48] Arguments: --nthreads 9
[2026-01-08 21:13:48] Threads: 9
[2026-01-08 21:13:48] Checking for CVMFS
[2026-01-08 21:13:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:13:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:13:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:13:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:13:49] 2.13.3.0 1263916 16308 199008 154926 3 924 26173530 40960001 12166 16776704 0 19481661 99.546 20352543 41843 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 21:13:49] CVMFS is ok
[2026-01-08 21:13:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 21:13:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 21:13:49] Further information can be found at the LHC@home message board.
[2026-01-08 21:13:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:13:49] Checking for apptainer binary...
[2026-01-08 21:13:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:13:49] Running /usr/bin/apptainer --version
[2026-01-08 21:13:49] apptainer version 1.4.5-2.el9
[2026-01-08 21:13:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:13:49] c-206-34.aglt2.org
[2026-01-08 21:13:49] apptainer works
[2026-01-08 21:13:49] Set ATHENA_PROC_NUMBER=9
[2026-01-08 21:13:49] Set ATHENA_CORE_NUMBER=9
[2026-01-08 21:13:49] Starting ATLAS job with PandaID=6963146869
[2026-01-08 21:13:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:55:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:55:21] 2026-01-09 06:01:38,836 | INFO     | monitor loop #892: job 0:6963146869 is in state 'finished'
[2026-01-09 02:55:21] 2026-01-09 06:01:38,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,505 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 02:55:21] 2026-01-09 06:01:39,517 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3292.55203125
[2026-01-09 02:55:21] 2026-01-09 06:01:39,582 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963146869/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,583 | INFO     | extracted standard info from prmon json
[2026-01-09 02:55:21] 2026-01-09 06:01:39,583 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:55:21] 2026-01-09 06:01:39,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:55:21] 2026-01-09 06:01:39,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:55:21] 2026-01-09 06:01:39,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:55:21] 2026-01-09 06:01:39,607 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:55:21] 2026-01-09 06:01:39,608 | INFO     | sum of square deviations: 3392347064.9954996
[2026-01-09 02:55:21] 2026-01-09 06:01:39,609 | INFO     | sum of deviations: 17519399562.986473
[2026-01-09 02:55:21] 2026-01-09 06:01:39,609 | INFO     | mean x: 1767931684.0045044
[2026-01-09 02:55:21] 2026-01-09 06:01:39,609 | INFO     | mean y: 2513672.0135135134
[2026-01-09 02:55:21] 2026-01-09 06:01:39,609 | INFO     | intersect: -9127773111.358265
[2026-01-09 02:55:21] 2026-01-09 06:01:39,628 | INFO     | chi2: 3.601790148238523
[2026-01-09 02:55:21] 2026-01-09 06:01:39,628 | INFO     | sum of square deviations: 3168274696.1935496
[2026-01-09 02:55:21] 2026-01-09 06:01:39,629 | INFO     | sum of deviations: 46010981232.225815
[2026-01-09 02:55:21] 2026-01-09 06:01:39,630 | INFO     | mean x: 1767931531.516129
[2026-01-09 02:55:21] 2026-01-09 06:01:39,630 | INFO     | mean y: 2532791.7926267283
[2026-01-09 02:55:21] 2026-01-09 06:01:39,630 | INFO     | intersect: -25672092143.405712
[2026-01-09 02:55:21] 2026-01-09 06:01:39,630 | INFO     | chi2: 2.1462999504709237
[2026-01-09 02:55:21] 2026-01-09 06:01:39,630 | INFO     | current chi2=2.1462999504709237 (change=40.41018876347962 %)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,630 | INFO     | sum of square deviations: 2954255704.957552
[2026-01-09 02:55:21] 2026-01-09 06:01:39,631 | INFO     | sum of deviations: 45096958701.853806
[2026-01-09 02:55:21] 2026-01-09 06:01:39,631 | INFO     | mean x: 1767931379.0141509
[2026-01-09 02:55:21] 2026-01-09 06:01:39,631 | INFO     | mean y: 2532140.382075472
[2026-01-09 02:55:21] 2026-01-09 06:01:39,632 | INFO     | intersect: -26985087195.791187
[2026-01-09 02:55:21] 2026-01-09 06:01:39,652 | INFO     | chi2: 2.1474979447411857
[2026-01-09 02:55:21] 2026-01-09 06:01:39,652 | INFO     | current chi2=2.1474979447411857 (change=-0.05581672170281515 %)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,652 | INFO     | right removable region: 211
[2026-01-09 02:55:21] 2026-01-09 06:01:39,661 | INFO     | sum of square deviations: 3168206376.1935496
[2026-01-09 02:55:21] 2026-01-09 06:01:39,662 | INFO     | sum of deviations: -30405216791.419353
[2026-01-09 02:55:21] 2026-01-09 06:01:39,662 | INFO     | mean x: 1767931836.516129
[2026-01-09 02:55:21] 2026-01-09 06:01:39,662 | INFO     | mean y: 2546071.6912442395
[2026-01-09 02:55:21] 2026-01-09 06:01:39,662 | INFO     | intersect: 16969354536.456844
[2026-01-09 02:55:21] 2026-01-09 06:01:39,662 | INFO     | chi2: 1.550953908282958
[2026-01-09 02:55:21] 2026-01-09 06:01:39,663 | INFO     | current chi2=1.550953908282958 (change=56.93935947263721 %)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,663 | INFO     | sum of square deviations: 2954185129.924526
[2026-01-09 02:55:21] 2026-01-09 06:01:39,664 | INFO     | sum of deviations: -35099095049.37736
[2026-01-09 02:55:21] 2026-01-09 06:01:39,664 | INFO     | mean x: 1767931989.018868
[2026-01-09 02:55:21] 2026-01-09 06:01:39,664 | INFO     | mean y: 2549375.5943396227
[2026-01-09 02:55:21] 2026-01-09 06:01:39,664 | INFO     | intersect: 21007601596.202244
[2026-01-09 02:55:21] 2026-01-09 06:01:39,664 | INFO     | chi2: 1.5118098411266443
[2026-01-09 02:55:21] 2026-01-09 06:01:39,664 | INFO     | current chi2=1.5118098411266443 (change=2.523870435301949 %)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,664 | INFO     | left removable region: 20
[2026-01-09 02:55:21] 2026-01-09 06:01:39,685 | INFO     | sum of square deviations: 2160353995.7172875
[2026-01-09 02:55:21] 2026-01-09 06:01:39,686 | INFO     | sum of deviations: -5988440072.104711
[2026-01-09 02:55:21] 2026-01-09 06:01:39,686 | INFO     | mean x: 1767931958.513089
[2026-01-09 02:55:21] 2026-01-09 06:01:39,686 | INFO     | mean y: 2570248.0418848167
[2026-01-09 02:55:21] 2026-01-09 06:01:39,686 | INFO     | intersect: 4903227550.549922
[2026-01-09 02:55:21] 2026-01-09 06:01:39,686 | INFO     | chi2: 0.009033270157000112
[2026-01-09 02:55:21] 2026-01-09 06:01:39,687 | INFO     | current memory leak: -2.77 B/s (using 191 data points, chi2=0.01)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,687 | INFO     | could have reported an average CPU frequency of 3290 MHz (11 samples)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,687 | INFO     | ..............................
[2026-01-09 02:55:21] 2026-01-09 06:01:39,687 | INFO     | . Timing measurements:
[2026-01-09 02:55:21] 2026-01-09 06:01:39,687 | INFO     | . get job = 0 s
[2026-01-09 02:55:21] 2026-01-09 06:01:39,687 | INFO     | . initial setup = 2 s
[2026-01-09 02:55:21] 2026-01-09 06:01:39,688 | INFO     | . payload setup = 28 s
[2026-01-09 02:55:21] 2026-01-09 06:01:39,688 | INFO     | . stage-in = 0 s
[2026-01-09 02:55:21] 2026-01-09 06:01:39,688 | INFO     | . payload execution = 13559 s
[2026-01-09 02:55:21] 2026-01-09 06:01:39,688 | INFO     | . stage-out = 2 s
[2026-01-09 02:55:21] 2026-01-09 06:01:39,688 | INFO     | . log creation = 0 s
[2026-01-09 02:55:21] 2026-01-09 06:01:39,688 | INFO     | ..............................
[2026-01-09 02:55:21] 2026-01-09 06:01:39,784 | INFO     | 
[2026-01-09 02:55:21] 2026-01-09 06:01:39,784 | INFO     | job summary report
[2026-01-09 02:55:21] 2026-01-09 06:01:39,784 | INFO     | --------------------------------------------------
[2026-01-09 02:55:21] 2026-01-09 06:01:39,784 | INFO     | PanDA job id: 6963146869
[2026-01-09 02:55:21] 2026-01-09 06:01:39,784 | INFO     | task id: 47898826
[2026-01-09 02:55:21] 2026-01-09 06:01:39,784 | INFO     | errors: (none)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | pilot state: finished 
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | transexitcode: 0
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | exeerrorcode: 0
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | exeerrordiag: 
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | exitcode: 0
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | exitmsg: OK
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | cpuconsumptiontime: 45948 s
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | nevents: 400
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | neventsw: 0
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | pid: 3201658
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | pgrp: 3201658
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | corecount: 9
[2026-01-09 02:55:21] 2026-01-09 06:01:39,785 | INFO     | event service: False
[2026-01-09 02:55:21] 2026-01-09 06:01:39,786 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 21: 2284288, 22: 2284316, 13591: 2314711, 13592: 2314838, 13596: 2323948, 13609: 2324086}
[2026-01-09 02:55:21] 2026-01-09 06:01:39,786 | INFO     | --------------------------------------------------
[2026-01-09 02:55:21] 2026-01-09 06:01:39,786 | INFO     | 
[2026-01-09 02:55:21] 2026-01-09 06:01:39,786 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 02:55:21] 2026-01-09 06:01:39,837 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,839 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,839 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:55:21] 2026-01-09 06:01:39,839 | INFO     | job 6963146869 has completed (purged errors)
[2026-01-09 02:55:21] 2026-01-09 06:01:39,839 | INFO     | overall cleanup function is called
[2026-01-09 02:55:21] 2026-01-09 06:01:40,848 | INFO     | --- collectZombieJob: --- 10, [3201658]
[2026-01-09 02:55:21] 2026-01-09 06:01:40,848 | INFO     | zombie collector waiting for pid 3201658
[2026-01-09 02:55:21] 2026-01-09 06:01:40,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:55:21] 2026-01-09 06:01:40,848 | INFO     | collected zombie processes
[2026-01-09 02:55:21] 2026-01-09 06:01:40,848 | INFO     | will attempt to kill all subprocesses of pid=3201658
[2026-01-09 02:55:21] 2026-01-09 06:01:41,668 | INFO     | process IDs to be killed: [3201658] (in reverse order)
[2026-01-09 02:55:21] 2026-01-09 06:01:42,283 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:55:21] 2026-01-09 06:01:42,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:55:21] 2026-01-09 06:01:42,377 | INFO     | did not find any defunct processes belonging to 3201658
[2026-01-09 02:55:21] 2026-01-09 06:01:42,387 | INFO     | did not find any defunct processes belonging to 3201658
[2026-01-09 02:55:21] 2026-01-09 06:01:42,388 | INFO     | ready for new job
[2026-01-09 02:55:21] 2026-01-09 06:01:42,388 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:55:21] 2026-01-09 06:01:42,391 | INFO     | ***************************************
[2026-01-09 02:55:21] 2026-01-09 06:01:42,446 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:55:21] 2026-01-09 06:01:42,446 | INFO     | ***************************************
[2026-01-09 02:55:21] 2026-01-09 06:01:42,446 | INFO     | 
[2026-01-09 02:55:21] 2026-01-09 06:01:42,478 | INFO     | architecture information:
[2026-01-09 02:55:21] 2026-01-09 06:01:42,488 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:55:21] 2026-01-09 06:01:42,633 | INFO     | cat /etc/os-release:
[2026-01-09 02:55:21] NAME="CentOS Linux"
[2026-01-09 02:55:21] VERSION="7 (Core)"
[2026-01-09 02:55:21] ID="centos"
[2026-01-09 02:55:21] ID_LIKE="rhel fedora"
[2026-01-09 02:55:21] VERSION_ID="7"
[2026-01-09 02:55:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:55:21] ANSI_COLOR="0;31"
[2026-01-09 02:55:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:55:21] HOME_URL="https://www.centos.org/"
[2026-01-09 02:55:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:55:21] 
[2026-01-09 02:55:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:55:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:55:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:55:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:55:21] 
[2026-01-09 02:55:21] 2026-01-09 06:01:42,633 | INFO     | ***************************************
[2026-01-09 02:55:21] 2026-01-09 06:01:43,137 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 02:55:21] 2026-01-09 06:01:43,327 | INFO     | sufficient remaining disk space (84167098368 B)
[2026-01-09 02:55:21] 2026-01-09 06:01:43,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:55:21] 2026-01-09 06:01:43,328 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:55:21] 2026-01-09 06:01:43,328 | INFO     | update_server=False
[2026-01-09 02:55:21] 2026-01-09 06:01:43,328 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:55:21] 2026-01-09 06:01:43,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:55:21] 2026-01-09 06:01:43,340 | INFO     | aborting loop
[2026-01-09 02:55:21] 2026-01-09 06:01:44,153 | INFO     | all job control threads have been joined
[2026-01-09 02:55:21] 2026-01-09 06:01:44,213 | INFO     | all data control threads have been joined
[2026-01-09 02:55:21] 2026-01-09 06:01:44,335 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:44,346 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:44,383 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:44,400 | INFO     | all payload control threads have been joined
[2026-01-09 02:55:21] 2026-01-09 06:01:44,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:55:21] 2026-01-09 06:01:44,533 | INFO     | [job] validate thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:44,683 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:44,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:55:21] 2026-01-09 06:01:45,047 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:45,115 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:45,122 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:45,159 | INFO     | [job] control thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:45,220 | INFO     | [data] control thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:45,299 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:45,409 | INFO     | [payload] control thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:45,594 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:45,820 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:46,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:55:21] 2026-01-09 06:01:46,431 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:01:50,113 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:55:21] 2026-01-09 06:02:11,944 | INFO     | PID=3188942 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 02:55:21] 2026-01-09 06:02:11,944 | INFO     | .. there are 13 such processes running
[2026-01-09 02:55:21] 2026-01-09 06:02:11,945 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:55:21] 2026-01-09 06:02:11,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:55:21] 2026-01-09 06:02:11,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:55:21] 2026-01-09 06:02:28,589 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:55:21] 2026-01-09 06:02:30,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140156033230656)>', '<ExcThread(monitor, started 140155688040192)>']
[2026-01-09 02:55:21] 2026-01-09 06:02:31,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:55:21] 2026-01-09 06:02:31,073 | INFO     | [monitor] control thread has ended
[2026-01-09 02:55:21] 2026-01-09 06:02:35,717 | INFO     | all workflow threads have been joined
[2026-01-09 02:55:21] 2026-01-09 06:02:35,717 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:55:21] 2026-01-09 06:02:35,717 | INFO     | traces error code: 0
[2026-01-09 02:55:21] 2026-01-09 06:02:35,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:55:21] 2026-01-09 06:02:36,156 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:55:21] 2026-01-09 06:02:36,199 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:55:21] 2026-01-09 06:02:36,208 [wrapper] pilotpid: 3188942
[2026-01-09 02:55:21] 2026-01-09 06:02:36,212 [wrapper] Pilot exit status: 0
[2026-01-09 02:55:21] 2026-01-09 06:02:36,275 [wrapper] pandaids: 6963146869
[2026-01-09 02:55:21] 2026-01-09 06:02:36,373 [wrapper] cleanup supervisor_pilot 3607719 3188943
[2026-01-09 02:55:21] 2026-01-09 06:02:36,376 [wrapper] Test setup, not cleaning
[2026-01-09 02:55:21] 2026-01-09 06:02:36,384 [wrapper] apfmon messages muted
[2026-01-09 02:55:21] 2026-01-09 06:02:36,392 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:55:21] 2026-01-09 06:02:36,394 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:55:21]  *** Error codes and diagnostics ***
[2026-01-09 02:55:21]     "exeErrorCode": 0,
[2026-01-09 02:55:21]     "exeErrorDiag": "",
[2026-01-09 02:55:21]     "pilotErrorCode": 0,
[2026-01-09 02:55:21]     "pilotErrorDiag": "",
[2026-01-09 02:55:21]  *** Listing of results directory ***
[2026-01-09 02:55:21] total 450920
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 02:55:21] -rwx------. 1 boincer umatlas     36322 Jan  8 10:06 runpilot2-wrapper.sh
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:07 queuedata.json
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas       100 Jan  8 21:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:55:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 21:13 run_atlas
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas       105 Jan  8 21:13 job.xml
[2026-01-09 02:55:21] -rw-r--r--. 2 boincer umatlas 227614291 Jan  8 21:13 EVNT.47898824._001071.pool.root.1
[2026-01-09 02:55:21] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 21:13 shared
[2026-01-09 02:55:21] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 21:13 input.tar.gz
[2026-01-09 02:55:21] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 21:13 start_atlas.sh
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas         0 Jan  8 21:13 boinc_lockfile
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 21:13 pandaJob.out
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas        57 Jan  8 21:13 setup.sh.local
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas    989821 Jan  8 21:14 agis_schedconf.cvmfs.json
[2026-01-09 02:55:21] drwx------. 5 boincer umatlas      4096 Jan  8 21:14 pilot3
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas 225642553 Jan  9 00:58 HITS.47898826._027172.pool.root.1
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas       531 Jan  9 00:58 boinc_task_state.xml
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas      1032 Jan  9 01:01 memory_monitor_summary.json
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas        95 Jan  9 01:01 pilot_heartbeat.json
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas   1516240 Jan  9 01:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas    481444 Jan  9 01:01 log.47898826._027172.job.log.tgz.1
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas      7777 Jan  9 01:01 heartbeat.json
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas      4824 Jan  9 01:02 pilotlog.txt
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas   1801046 Jan  9 01:02 log.47898826._027172.job.log.1
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas       357 Jan  9 01:02 output.list
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas       620 Jan  9 01:02 runtime_log
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas   2304000 Jan  9 01:02 result.tar.gz
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 01:02 runtime_log.err
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas       655 Jan  9 01:02 45dKDmZl6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1afKDmPD7Msm.diag
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas      6909 Jan  9 02:55 init_data.xml
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 02:55 boinc_mmap_file
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas        28 Jan  9 02:55 wrapper_checkpoint.txt
[2026-01-09 02:55:21] -rw-r--r--. 1 boincer umatlas     21218 Jan  9 02:55 stderr.txt
[2026-01-09 02:55:21] HITS file was successfully produced:
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas 225642553 Jan  9 00:58 shared/HITS.pool.root.1
[2026-01-09 02:55:21]  *** Contents of shared directory: ***
[2026-01-09 02:55:21] total 445492
[2026-01-09 02:55:21] -rw-r--r--. 2 boincer umatlas 227614291 Jan  8 21:13 ATLAS.root_0
[2026-01-09 02:55:21] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 21:13 input.tar.gz
[2026-01-09 02:55:21] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 21:13 start_atlas.sh
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas 225642553 Jan  9 00:58 HITS.pool.root.1
[2026-01-09 02:55:21] -rw-------. 1 boincer umatlas   2304000 Jan  9 01:02 result.tar.gz
02:55:23 (3185226): run_atlas exited; CPU time 46106.292798
02:55:23 (3185226): called boinc_finish(0)

</stderr_txt>
]]>

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