Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:32 (3499661): wrapper (7.7.26015): starting
00:02:32 (3499661): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 00:02:32] Arguments: --nthreads 11
[2026-01-09 00:02:32] Threads: 11
[2026-01-09 00:02:32] Checking for CVMFS
[2026-01-09 00:02:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:02:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:02:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:02:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:02:33] 2.13.3.0 1263916 16477 180428 154931 3 386 27416809 40960001 12510 16776704 0 19787397 99.546 20886644 42136 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:02:33] CVMFS is ok
[2026-01-09 00:02:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:02:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:02:33] Further information can be found at the LHC@home message board.
[2026-01-09 00:02:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:02:33] Checking for apptainer binary...
[2026-01-09 00:02:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:02:33] Running /usr/bin/apptainer --version
[2026-01-09 00:02:33] apptainer version 1.4.5-2.el9
[2026-01-09 00:02:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:02:34] c-206-34.aglt2.org
[2026-01-09 00:02:34] apptainer works
[2026-01-09 00:02:34] Set ATHENA_PROC_NUMBER=11
[2026-01-09 00:02:34] Set ATHENA_CORE_NUMBER=11
[2026-01-09 00:02:34] Starting ATLAS job with PandaID=6963147032
[2026-01-09 00:02:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:33:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:33:36] 2026-01-09 13:32:26,880 | INFO     | extracted standard info from prmon json
[2026-01-09 08:33:36] 2026-01-09 13:32:26,880 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:33:36] 2026-01-09 13:32:26,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:33:36] 2026-01-09 13:32:26,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:33:36] 2026-01-09 13:32:26,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:33:36] 2026-01-09 13:32:26,928 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:33:36] 2026-01-09 13:32:26,929 | INFO     | sum of square deviations: 38529774101.23439
[2026-01-09 08:33:36] 2026-01-09 13:32:26,960 | INFO     | sum of deviations: 194519859387.93982
[2026-01-09 08:33:36] 2026-01-09 13:32:26,960 | INFO     | mean x: 1767950290.5551102
[2026-01-09 08:33:36] 2026-01-09 13:32:26,960 | INFO     | mean y: 2605261.729458918
[2026-01-09 08:33:36] 2026-01-09 13:32:26,960 | INFO     | intersect: -8922997079.464378
[2026-01-09 08:33:36] 2026-01-09 13:32:26,961 | INFO     | chi2: 4.5428615991925465
[2026-01-09 08:33:36] 2026-01-09 13:32:26,961 | INFO     | sum of square deviations: 37383199586.41288
[2026-01-09 08:33:36] 2026-01-09 13:32:27,039 | INFO     | sum of deviations: 291376748511.8986
[2026-01-09 08:33:36] 2026-01-09 13:32:27,039 | INFO     | mean x: 1767950138.0566802
[2026-01-09 08:33:36] 2026-01-09 13:32:27,039 | INFO     | mean y: 2618089.1821862347
[2026-01-09 08:33:36] 2026-01-09 13:32:27,039 | INFO     | intersect: -13777357099.066492
[2026-01-09 08:33:36] 2026-01-09 13:32:27,040 | INFO     | chi2: 2.387467963176779
[2026-01-09 08:33:36] 2026-01-09 13:32:27,040 | INFO     | current chi2=2.387467963176779 (change=47.44572531989242 %)
[2026-01-09 08:33:36] 2026-01-09 13:32:27,040 | INFO     | sum of square deviations: 36259571868.70346
[2026-01-09 08:33:36] 2026-01-09 13:32:27,080 | INFO     | sum of deviations: 287458679019.53394
[2026-01-09 08:33:36] 2026-01-09 13:32:27,080 | INFO     | mean x: 1767949985.5562372
[2026-01-09 08:33:36] 2026-01-09 13:32:27,080 | INFO     | mean y: 2617557.398773006
[2026-01-09 08:33:36] 2026-01-09 13:32:27,080 | INFO     | intersect: -14013338539.955233
[2026-01-09 08:33:36] 2026-01-09 13:32:27,081 | INFO     | chi2: 2.3863488898967575
[2026-01-09 08:33:36] 2026-01-09 13:32:27,081 | INFO     | current chi2=2.3863488898967575 (change=0.046872808233715896 %)
[2026-01-09 08:33:36] 2026-01-09 13:32:27,081 | INFO     | right removable region: 488
[2026-01-09 08:33:36] 2026-01-09 13:32:27,082 | INFO     | sum of square deviations: 37383091372.1782
[2026-01-09 08:33:36] 2026-01-09 13:32:27,121 | INFO     | sum of deviations: 89331234819.99591
[2026-01-09 08:33:36] 2026-01-09 13:32:27,122 | INFO     | mean x: 1767950443.0607288
[2026-01-09 08:33:36] 2026-01-09 13:32:27,122 | INFO     | mean y: 2619210.5668016193
[2026-01-09 08:33:36] 2026-01-09 13:32:27,122 | INFO     | intersect: -4222103528.5674253
[2026-01-09 08:33:36] 2026-01-09 13:32:27,122 | INFO     | chi2: 2.75895904569313
[2026-01-09 08:33:36] 2026-01-09 13:32:27,122 | INFO     | current chi2=2.75895904569313 (change=39.268256682450755 %)
[2026-01-09 08:33:36] 2026-01-09 13:32:27,123 | INFO     | sum of square deviations: 36259385818.09007
[2026-01-09 08:33:36] 2026-01-09 13:32:27,140 | INFO     | sum of deviations: 49358052836.6829
[2026-01-09 08:33:36] 2026-01-09 13:32:27,140 | INFO     | mean x: 1767950595.5664623
[2026-01-09 08:33:36] 2026-01-09 13:32:27,140 | INFO     | mean y: 2624630.163599182
[2026-01-09 08:33:36] 2026-01-09 13:32:27,140 | INFO     | intersect: -2403996357.4726143
[2026-01-09 08:33:36] 2026-01-09 13:32:27,140 | INFO     | chi2: 2.568678579908906
[2026-01-09 08:33:36] 2026-01-09 13:32:27,141 | INFO     | current chi2=2.568678579908906 (change=6.896820961560166 %)
[2026-01-09 08:33:36] 2026-01-09 13:32:27,141 | INFO     | left removable region: 20
[2026-01-09 08:33:36] 2026-01-09 13:32:27,173 | INFO     | sum of square deviations: 31785710410.91459
[2026-01-09 08:33:36] 2026-01-09 13:32:27,211 | INFO     | sum of deviations: 69976589567.1837
[2026-01-09 08:33:36] 2026-01-09 13:32:27,212 | INFO     | mean x: 1767950565.0811965
[2026-01-09 08:33:36] 2026-01-09 13:32:27,212 | INFO     | mean y: 2648202.6004273505
[2026-01-09 08:33:36] 2026-01-09 13:32:27,212 | INFO     | intersect: -3889514327.9332943
[2026-01-09 08:33:36] 2026-01-09 13:32:27,212 | INFO     | chi2: 0.07291619990657791
[2026-01-09 08:33:36] 2026-01-09 13:32:27,212 | INFO     | current memory leak: 2.20 B/s (using 468 data points, chi2=0.07)
[2026-01-09 08:33:36] 2026-01-09 13:32:27,213 | INFO     | could have reported an average CPU frequency of 3288 MHz (20 samples)
[2026-01-09 08:33:36] 2026-01-09 13:32:27,213 | INFO     | ..............................
[2026-01-09 08:33:36] 2026-01-09 13:32:27,213 | INFO     | . Timing measurements:
[2026-01-09 08:33:36] 2026-01-09 13:32:27,213 | INFO     | . get job = 0 s
[2026-01-09 08:33:36] 2026-01-09 13:32:27,213 | INFO     | . initial setup = 8 s
[2026-01-09 08:33:36] 2026-01-09 13:32:27,213 | INFO     | . payload setup = 24 s
[2026-01-09 08:33:36] 2026-01-09 13:32:27,213 | INFO     | . stage-in = 0 s
[2026-01-09 08:33:36] 2026-01-09 13:32:27,213 | INFO     | . payload execution = 30440 s
[2026-01-09 08:33:36] 2026-01-09 13:32:27,214 | INFO     | . stage-out = 3 s
[2026-01-09 08:33:36] 2026-01-09 13:32:27,214 | INFO     | . log creation = 0 s
[2026-01-09 08:33:36] 2026-01-09 13:32:27,214 | INFO     | ..............................
[2026-01-09 08:33:36] 2026-01-09 13:32:27,563 | INFO     | 
[2026-01-09 08:33:36] 2026-01-09 13:32:27,591 | INFO     | job summary report
[2026-01-09 08:33:36] 2026-01-09 13:32:27,591 | INFO     | --------------------------------------------------
[2026-01-09 08:33:36] 2026-01-09 13:32:27,591 | INFO     | PanDA job id: 6963147032
[2026-01-09 08:33:36] 2026-01-09 13:32:27,591 | INFO     | task id: 47898826
[2026-01-09 08:33:36] 2026-01-09 13:32:27,591 | INFO     | errors: (none)
[2026-01-09 08:33:36] 2026-01-09 13:32:27,591 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:33:36] 2026-01-09 13:32:27,591 | INFO     | pilot state: finished 
[2026-01-09 08:33:36] 2026-01-09 13:32:27,591 | INFO     | transexitcode: 0
[2026-01-09 08:33:36] 2026-01-09 13:32:27,591 | INFO     | exeerrorcode: 0
[2026-01-09 08:33:36] 2026-01-09 13:32:27,591 | INFO     | exeerrordiag: 
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | exitcode: 0
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | exitmsg: OK
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | cpuconsumptiontime: 47500 s
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | nevents: 400
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | neventsw: 0
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | pid: 3522095
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | pgrp: 3522095
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | corecount: 11
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | event service: False
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | sizes: {0: 2283970, 1: 2283970, 12: 2283998, 19: 2284288, 23: 2284316, 30469: 2322852, 30473: 2331850, 30474: 2331906, 30488: 2332100}
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | --------------------------------------------------
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | 
[2026-01-09 08:33:36] 2026-01-09 13:32:27,592 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 08:33:36] 2026-01-09 13:32:27,935 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,935 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,935 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,935 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,936 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:33:36] 2026-01-09 13:32:27,937 | INFO     | job 6963147032 has completed (purged errors)
[2026-01-09 08:33:36] 2026-01-09 13:32:27,937 | INFO     | overall cleanup function is called
[2026-01-09 08:33:36] 2026-01-09 13:32:28,518 | INFO     | PID=3506422 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:33:36] 2026-01-09 13:32:28,523 | INFO     | .. there are 11 such processes running
[2026-01-09 08:33:36] 2026-01-09 13:32:28,951 | INFO     | --- collectZombieJob: --- 10, [3522095]
[2026-01-09 08:33:36] 2026-01-09 13:32:28,951 | INFO     | zombie collector waiting for pid 3522095
[2026-01-09 08:33:36] 2026-01-09 13:32:28,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:33:36] 2026-01-09 13:32:28,951 | INFO     | collected zombie processes
[2026-01-09 08:33:36] 2026-01-09 13:32:28,951 | INFO     | will attempt to kill all subprocesses of pid=3522095
[2026-01-09 08:33:36] 2026-01-09 13:32:29,675 | INFO     | process IDs to be killed: [3522095] (in reverse order)
[2026-01-09 08:33:36] 2026-01-09 13:32:29,817 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:33:36] 2026-01-09 13:32:29,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:33:36] 2026-01-09 13:32:29,843 | INFO     | did not find any defunct processes belonging to 3522095
[2026-01-09 08:33:36] 2026-01-09 13:32:29,865 | INFO     | did not find any defunct processes belonging to 3522095
[2026-01-09 08:33:36] 2026-01-09 13:32:29,865 | INFO     | ready for new job
[2026-01-09 08:33:36] 2026-01-09 13:32:29,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:33:36] 2026-01-09 13:32:29,871 | INFO     | ***************************************
[2026-01-09 08:33:36] 2026-01-09 13:32:29,871 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:33:36] 2026-01-09 13:32:29,871 | INFO     | ***************************************
[2026-01-09 08:33:36] 2026-01-09 13:32:29,871 | INFO     | 
[2026-01-09 08:33:36] 2026-01-09 13:32:29,878 | INFO     | architecture information:
[2026-01-09 08:33:36] 2026-01-09 13:32:29,880 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:33:36] 2026-01-09 13:32:29,901 | INFO     | cat /etc/os-release:
[2026-01-09 08:33:36] NAME="CentOS Linux"
[2026-01-09 08:33:36] VERSION="7 (Core)"
[2026-01-09 08:33:36] ID="centos"
[2026-01-09 08:33:36] ID_LIKE="rhel fedora"
[2026-01-09 08:33:36] VERSION_ID="7"
[2026-01-09 08:33:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:33:36] ANSI_COLOR="0;31"
[2026-01-09 08:33:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:33:36] HOME_URL="https://www.centos.org/"
[2026-01-09 08:33:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:33:36] 
[2026-01-09 08:33:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:33:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:33:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:33:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:33:36] 
[2026-01-09 08:33:36] 2026-01-09 13:32:29,901 | INFO     | ***************************************
[2026-01-09 08:33:36] 2026-01-09 13:32:30,404 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 08:33:36] 2026-01-09 13:32:30,425 | INFO     | sufficient remaining disk space (85162196992 B)
[2026-01-09 08:33:36] 2026-01-09 13:32:30,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:33:36] 2026-01-09 13:32:30,425 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:33:36] 2026-01-09 13:32:30,425 | INFO     | update_server=False
[2026-01-09 08:33:36] 2026-01-09 13:32:30,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:33:36] 2026-01-09 13:32:30,580 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 08:33:36] 2026-01-09 13:32:30,580 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 08:33:36] 2026-01-09 13:32:30,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:33:36] 2026-01-09 13:32:30,580 | INFO     | will abort loop
[2026-01-09 08:33:36] 2026-01-09 13:32:30,593 | INFO     | all data control threads have been joined
[2026-01-09 08:33:36] 2026-01-09 13:32:30,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:33:36] 2026-01-09 13:32:30,983 | INFO     | all job control threads have been joined
[2026-01-09 08:33:36] 2026-01-09 13:32:31,160 | INFO     | all payload control threads have been joined
[2026-01-09 08:33:36] 2026-01-09 13:32:31,431 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:31,586 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:31,599 | INFO     | [data] control thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:31,637 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:31,989 | INFO     | [job] control thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:32,150 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:32,161 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:32,166 | INFO     | [payload] control thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:32,311 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:32,418 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:32,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:33:36] 2026-01-09 13:32:32,616 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:32,651 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:32,700 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:32,764 | INFO     | [job] validate thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:33,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:33:36] 2026-01-09 13:32:33,584 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:32:37,157 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:33:36] 2026-01-09 13:33:01,559 | INFO     | PID=3506422 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:33:36] 2026-01-09 13:33:01,559 | INFO     | .. there are 11 such processes running
[2026-01-09 08:33:36] 2026-01-09 13:33:01,564 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:33:36] 2026-01-09 13:33:01,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:33:36] 2026-01-09 13:33:01,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:33:36] 2026-01-09 13:33:29,677 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:33:36] 2026-01-09 13:33:30,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365248833344)>', '<ExcThread(monitor, started 140364899940096)>']
[2026-01-09 08:33:36] 2026-01-09 13:33:30,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:33:36] 2026-01-09 13:33:30,738 | INFO     | [monitor] control thread has ended
[2026-01-09 08:33:36] 2026-01-09 13:33:30,821 [wrapper] supervise_pilot (15 min periods counter: 35)
[2026-01-09 08:33:36] 2026-01-09 13:33:35,490 | INFO     | all workflow threads have been joined
[2026-01-09 08:33:36] 2026-01-09 13:33:35,491 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:33:36] 2026-01-09 13:33:35,491 | INFO     | traces error code: 0
[2026-01-09 08:33:36] 2026-01-09 13:33:35,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:33:36] 2026-01-09 13:33:35,826 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:33:36] 2026-01-09 13:33:35,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:33:36] 2026-01-09 13:33:35,846 [wrapper] pilotpid: 3506422
[2026-01-09 08:33:36] 2026-01-09 13:33:35,849 [wrapper] Pilot exit status: 0
[2026-01-09 08:33:36] 2026-01-09 13:33:35,881 [wrapper] pandaids: 6963147032
[2026-01-09 08:33:36] 2026-01-09 13:33:36,080 [wrapper] cleanup supervisor_pilot  308443 3506423
[2026-01-09 08:33:36] 2026-01-09 13:33:36,084 [wrapper] Test setup, not cleaning
[2026-01-09 08:33:36] 2026-01-09 13:33:36,088 [wrapper] apfmon messages muted
[2026-01-09 08:33:36] 2026-01-09 13:33:36,091 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:33:36] 2026-01-09 13:33:36,099 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:33:36]  *** Error codes and diagnostics ***
[2026-01-09 08:33:36]     "exeErrorCode": 0,
[2026-01-09 08:33:36]     "exeErrorDiag": "",
[2026-01-09 08:33:36]     "pilotErrorCode": 0,
[2026-01-09 08:33:36]     "pilotErrorDiag": "",
[2026-01-09 08:33:36]  *** Listing of results directory ***
[2026-01-09 08:33:36] total 445516
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 08:33:36] -rwx------. 1 boincer umatlas     36322 Jan  8 10:06 runpilot2-wrapper.sh
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:07 queuedata.json
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:33:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:02 run_atlas
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:02 job.xml
[2026-01-09 08:33:36] -rw-r--r--. 2 boincer umatlas 224431166 Jan  9 00:02 EVNT.47898824._001078.pool.root.1
[2026-01-09 08:33:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 08:33:36] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:02 shared
[2026-01-09 08:33:36] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 00:02 input.tar.gz
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:02 boinc_lockfile
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:02 pandaJob.out
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas        57 Jan  9 00:02 setup.sh.local
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas    989771 Jan  9 00:03 agis_schedconf.cvmfs.json
[2026-01-09 08:33:36] drwx------. 5 boincer umatlas      4096 Jan  9 00:03 pilot3
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas 218172682 Jan  9 08:28 HITS.47898826._027335.pool.root.1
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas       530 Jan  9 08:28 boinc_task_state.xml
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas      6908 Jan  9 08:30 init_data.xml
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas      1041 Jan  9 08:32 memory_monitor_summary.json
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas   1516240 Jan  9 08:32 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas    734251 Jan  9 08:32 log.47898826._027335.job.log.tgz.1
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas      7799 Jan  9 08:32 heartbeat.json
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas        95 Jan  9 08:33 pilot_heartbeat.json
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas        28 Jan  9 08:33 wrapper_checkpoint.txt
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 08:33 boinc_mmap_file
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas      5010 Jan  9 08:33 pilotlog.txt
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas   4107107 Jan  9 08:33 log.47898826._027335.job.log.1
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas       357 Jan  9 08:33 output.list
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas       620 Jan  9 08:33 runtime_log
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas   4864000 Jan  9 08:33 result.tar.gz
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas      9345 Jan  9 08:33 runtime_log.err
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas       662 Jan  9 08:33 6tLLDm0l6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLbfKDmLyBKJm.diag
[2026-01-09 08:33:36] -rw-r--r--. 1 boincer umatlas     21216 Jan  9 08:33 stderr.txt
[2026-01-09 08:33:36] HITS file was successfully produced:
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas 218172682 Jan  9 08:28 shared/HITS.pool.root.1
[2026-01-09 08:33:36]  *** Contents of shared directory: ***
[2026-01-09 08:33:36] total 437588
[2026-01-09 08:33:36] -rw-r--r--. 2 boincer umatlas 224431166 Jan  9 00:02 ATLAS.root_0
[2026-01-09 08:33:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 08:33:36] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 00:02 input.tar.gz
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas 218172682 Jan  9 08:28 HITS.pool.root.1
[2026-01-09 08:33:36] -rw-------. 1 boincer umatlas   4864000 Jan  9 08:33 result.tar.gz
08:33:38 (3499661): run_atlas exited; CPU time 48062.443024
08:33:38 (3499661): called boinc_finish(0)

</stderr_txt>
]]>

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