Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:34:06 (3926664): wrapper (7.7.26015): starting
07:34:06 (3926664): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 07:34:06] Arguments: --nthreads 12
[2026-01-09 07:34:06] Threads: 12
[2026-01-09 07:34:06] Checking for CVMFS
[2026-01-09 07:34:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:34:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:34:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:34:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:34:06] 2.13.3.0 3084131 1584 77560 154934 2 56 3828305 4097025 923 130560 0 2066623 99.993 63222 23956 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-09 07:34:06] CVMFS is ok
[2026-01-09 07:34:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:34:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:34:06] Further information can be found at the LHC@home message board.
[2026-01-09 07:34:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:34:06] Checking for apptainer binary...
[2026-01-09 07:34:06] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 07:34:06] apptainer is not installed, using version from CVMFS
[2026-01-09 07:34:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:34:07] pckelar3.cern.ch
[2026-01-09 07:34:07] apptainer works
[2026-01-09 07:34:07] Set ATHENA_PROC_NUMBER=12
[2026-01-09 07:34:07] Set ATHENA_CORE_NUMBER=12
[2026-01-09 07:34:07] Starting ATLAS job with PandaID=6963146080
[2026-01-09 07:34:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:13:58]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:13:58] 2026-01-09 09:13:22,703 | INFO     | monitor loop #692: job 0:6963146080 is in state 'finished'
[2026-01-09 10:13:58] 2026-01-09 09:13:22,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:13:58] 2026-01-09 09:13:23,041 | INFO     | time since job start (9546s) is within the limit (349056.0s)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,047 | INFO     | time since job start (9548s) is within the limit (349056.0s)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,206 | INFO     | monitor loop #693: job 0:6963146080 is in state 'finished'
[2026-01-09 10:13:58] 2026-01-09 09:13:25,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,377 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 10:13:58] 2026-01-09 09:13:25,382 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2825.1482499999997
[2026-01-09 10:13:58] 2026-01-09 09:13:25,388 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6963146080/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,389 | INFO     | extracted standard info from prmon json
[2026-01-09 10:13:58] 2026-01-09 09:13:25,389 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:13:58] 2026-01-09 09:13:25,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:13:58] 2026-01-09 09:13:25,390 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:13:58] 2026-01-09 09:13:25,390 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:13:58] 2026-01-09 09:13:25,395 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:13:58] 2026-01-09 09:13:25,395 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,396 | INFO     | sum of deviations: -4584912042.500001
[2026-01-09 10:13:58] 2026-01-09 09:13:25,397 | INFO     | mean x: 1767945215.5
[2026-01-09 10:13:58] 2026-01-09 09:13:25,397 | INFO     | mean y: 2747935.326923077
[2026-01-09 10:13:58] 2026-01-09 09:13:25,397 | INFO     | intersect: 6888722889.300847
[2026-01-09 10:13:58] 2026-01-09 09:13:25,397 | INFO     | chi2: 1.6469655159409458
[2026-01-09 10:13:58] 2026-01-09 09:13:25,398 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,399 | INFO     | sum of deviations: -4248061655.0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,399 | INFO     | mean x: 1767945063.0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,399 | INFO     | mean y: 2748404.178807947
[2026-01-09 10:13:58] 2026-01-09 09:13:25,399 | INFO     | intersect: 7037833560.246059
[2026-01-09 10:13:58] 2026-01-09 09:13:25,400 | INFO     | chi2: 1.6466696755536694
[2026-01-09 10:13:58] 2026-01-09 09:13:25,400 | INFO     | current chi2=1.6466696755536694 (change=0.01796275540762306 %)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,400 | INFO     | right removable region: 150
[2026-01-09 10:13:58] 2026-01-09 09:13:25,401 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,402 | INFO     | sum of deviations: -29297840426.0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,402 | INFO     | mean x: 1767945368.0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,402 | INFO     | mean y: 2781811.7483443706
[2026-01-09 10:13:58] 2026-01-09 09:13:25,402 | INFO     | intersect: 48522048852.3004
[2026-01-09 10:13:58] 2026-01-09 09:13:25,403 | INFO     | chi2: 0.23663909013723428
[2026-01-09 10:13:58] 2026-01-09 09:13:25,403 | INFO     | current chi2=0.23663909013723428 (change=85.6318126975453 %)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,403 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 10:13:58] 2026-01-09 09:13:25,404 | INFO     | sum of deviations: -27496078271.5
[2026-01-09 10:13:58] 2026-01-09 09:13:25,405 | INFO     | mean x: 1767945520.5
[2026-01-09 10:13:58] 2026-01-09 09:13:25,405 | INFO     | mean y: 2779009.7602739725
[2026-01-09 10:13:58] 2026-01-09 09:13:25,405 | INFO     | intersect: 50378702036.87567
[2026-01-09 10:13:58] 2026-01-09 09:13:25,405 | INFO     | chi2: 0.20750836045206156
[2026-01-09 10:13:58] 2026-01-09 09:13:25,405 | INFO     | current chi2=0.20750836045206156 (change=12.310193412372788 %)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,406 | INFO     | left removable region: 20
[2026-01-09 10:13:58] 2026-01-09 09:13:25,406 | INFO     | sum of square deviations: 681212772.5
[2026-01-09 10:13:58] 2026-01-09 09:13:25,407 | INFO     | sum of deviations: -13009539600.999998
[2026-01-09 10:13:58] 2026-01-09 09:13:25,407 | INFO     | mean x: 1767945642.5
[2026-01-09 10:13:58] 2026-01-09 09:13:25,407 | INFO     | mean y: 2756969.3538461537
[2026-01-09 10:13:58] 2026-01-09 09:13:25,407 | INFO     | intersect: 33766303069.803886
[2026-01-09 10:13:58] 2026-01-09 09:13:25,408 | INFO     | chi2: 0.14651838931149738
[2026-01-09 10:13:58] 2026-01-09 09:13:25,408 | INFO     | current memory leak: -19.10 B/s (using 130 data points, chi2=0.15)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,408 | INFO     | could have reported an average CPU frequency of 2813 MHz (9 samples)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,409 | INFO     | ..............................
[2026-01-09 10:13:58] 2026-01-09 09:13:25,409 | INFO     | . Timing measurements:
[2026-01-09 10:13:58] 2026-01-09 09:13:25,409 | INFO     | . get job = 0 s
[2026-01-09 10:13:58] 2026-01-09 09:13:25,409 | INFO     | . initial setup = 1 s
[2026-01-09 10:13:58] 2026-01-09 09:13:25,409 | INFO     | . payload setup = 8 s
[2026-01-09 10:13:58] 2026-01-09 09:13:25,409 | INFO     | . stage-in = 0 s
[2026-01-09 10:13:58] 2026-01-09 09:13:25,410 | INFO     | . payload execution = 9508 s
[2026-01-09 10:13:58] 2026-01-09 09:13:25,410 | INFO     | . stage-out = 1 s
[2026-01-09 10:13:58] 2026-01-09 09:13:25,410 | INFO     | . log creation = 0 s
[2026-01-09 10:13:58] 2026-01-09 09:13:25,410 | INFO     | ..............................
[2026-01-09 10:13:58] 2026-01-09 09:13:25,564 | INFO     | 
[2026-01-09 10:13:58] 2026-01-09 09:13:25,564 | INFO     | job summary report
[2026-01-09 10:13:58] 2026-01-09 09:13:25,565 | INFO     | --------------------------------------------------
[2026-01-09 10:13:58] 2026-01-09 09:13:25,565 | INFO     | PanDA job id: 6963146080
[2026-01-09 10:13:58] 2026-01-09 09:13:25,565 | INFO     | task id: 47898826
[2026-01-09 10:13:58] 2026-01-09 09:13:25,565 | INFO     | errors: (none)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,565 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:13:58] 2026-01-09 09:13:25,565 | INFO     | pilot state: finished 
[2026-01-09 10:13:58] 2026-01-09 09:13:25,566 | INFO     | transexitcode: 0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,566 | INFO     | exeerrorcode: 0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,566 | INFO     | exeerrordiag: 
[2026-01-09 10:13:58] 2026-01-09 09:13:25,566 | INFO     | exitcode: 0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,566 | INFO     | exitmsg: OK
[2026-01-09 10:13:58] 2026-01-09 09:13:25,566 | INFO     | cpuconsumptiontime: 104759 s
[2026-01-09 10:13:58] 2026-01-09 09:13:25,567 | INFO     | nevents: 400
[2026-01-09 10:13:58] 2026-01-09 09:13:25,567 | INFO     | neventsw: 0
[2026-01-09 10:13:58] 2026-01-09 09:13:25,567 | INFO     | pid: 3938002
[2026-01-09 10:13:58] 2026-01-09 09:13:25,567 | INFO     | pgrp: 3938002
[2026-01-09 10:13:58] 2026-01-09 09:13:25,567 | INFO     | corecount: 12
[2026-01-09 10:13:58] 2026-01-09 09:13:25,567 | INFO     | event service: False
[2026-01-09 10:13:58] 2026-01-09 09:13:25,568 | INFO     | sizes: {0: 2283969, 1: 2283969, 6: 2284259, 12: 2284287, 9521: 2312552, 9523: 2321550, 9525: 2321734, 9531: 2321992}
[2026-01-09 10:13:58] 2026-01-09 09:13:25,568 | INFO     | --------------------------------------------------
[2026-01-09 10:13:58] 2026-01-09 09:13:25,568 | INFO     | 
[2026-01-09 10:13:58] 2026-01-09 09:13:25,568 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-09 10:13:58] 2026-01-09 09:13:25,588 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,589 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,589 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,589 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,590 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,590 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,590 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,591 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,591 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,591 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,591 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,591 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,592 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,592 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:13:58] 2026-01-09 09:13:25,592 | INFO     | job 6963146080 has completed (purged errors)
[2026-01-09 10:13:58] 2026-01-09 09:13:25,593 | INFO     | overall cleanup function is called
[2026-01-09 10:13:58] 2026-01-09 09:13:26,599 | INFO     | --- collectZombieJob: --- 10, [3938002]
[2026-01-09 10:13:58] 2026-01-09 09:13:26,600 | INFO     | zombie collector waiting for pid 3938002
[2026-01-09 10:13:58] 2026-01-09 09:13:26,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:13:58] 2026-01-09 09:13:26,600 | INFO     | collected zombie processes
[2026-01-09 10:13:58] 2026-01-09 09:13:26,600 | INFO     | will attempt to kill all subprocesses of pid=3938002
[2026-01-09 10:13:58] 2026-01-09 09:13:26,785 | INFO     | process IDs to be killed: [3938002] (in reverse order)
[2026-01-09 10:13:58] 2026-01-09 09:13:26,840 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:13:58] 2026-01-09 09:13:26,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:13:58] 2026-01-09 09:13:26,848 | INFO     | did not find any defunct processes belonging to 3938002
[2026-01-09 10:13:58] 2026-01-09 09:13:26,854 | INFO     | did not find any defunct processes belonging to 3938002
[2026-01-09 10:13:58] 2026-01-09 09:13:26,854 | INFO     | ready for new job
[2026-01-09 10:13:58] 2026-01-09 09:13:26,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:13:58] 2026-01-09 09:13:26,856 | INFO     | ***************************************
[2026-01-09 10:13:58] 2026-01-09 09:13:26,857 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:13:58] 2026-01-09 09:13:26,857 | INFO     | ***************************************
[2026-01-09 10:13:58] 2026-01-09 09:13:26,857 | INFO     | 
[2026-01-09 10:13:58] 2026-01-09 09:13:26,858 | INFO     | architecture information:
[2026-01-09 10:13:58] 2026-01-09 09:13:26,859 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:13:58] 2026-01-09 09:13:26,871 | INFO     | cat /etc/os-release:
[2026-01-09 10:13:58] NAME="CentOS Linux"
[2026-01-09 10:13:58] VERSION="7 (Core)"
[2026-01-09 10:13:58] ID="centos"
[2026-01-09 10:13:58] ID_LIKE="rhel fedora"
[2026-01-09 10:13:58] VERSION_ID="7"
[2026-01-09 10:13:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:13:58] ANSI_COLOR="0;31"
[2026-01-09 10:13:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:13:58] HOME_URL="https://www.centos.org/"
[2026-01-09 10:13:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:13:58] 
[2026-01-09 10:13:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:13:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:13:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:13:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:13:58] 
[2026-01-09 10:13:58] 2026-01-09 09:13:26,871 | INFO     | ***************************************
[2026-01-09 10:13:58] 2026-01-09 09:13:27,374 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-09 10:13:58] 2026-01-09 09:13:27,390 | INFO     | sufficient remaining disk space (564844822528 B)
[2026-01-09 10:13:58] 2026-01-09 09:13:27,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:13:58] 2026-01-09 09:13:27,391 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:13:58] 2026-01-09 09:13:27,391 | INFO     | update_server=False
[2026-01-09 10:13:58] 2026-01-09 09:13:27,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:13:58] 2026-01-09 09:13:27,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:13:58] 2026-01-09 09:13:27,709 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 10:13:58] 2026-01-09 09:13:27,709 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 10:13:58] 2026-01-09 09:13:27,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:13:58] 2026-01-09 09:13:27,709 | INFO     | will abort loop
[2026-01-09 10:13:58] 2026-01-09 09:13:27,724 | INFO     | all job control threads have been joined
[2026-01-09 10:13:58] 2026-01-09 09:13:27,811 | INFO     | all payload control threads have been joined
[2026-01-09 10:13:58] 2026-01-09 09:13:27,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:13:58] 2026-01-09 09:13:28,394 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:28,394 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:28,421 | INFO     | all data control threads have been joined
[2026-01-09 10:13:58] 2026-01-09 09:13:28,576 | INFO     | [job] validate thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:28,620 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:28,715 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:28,729 | INFO     | [job] control thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:28,817 | INFO     | [payload] control thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:29,214 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:29,394 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:29,426 | INFO     | [data] control thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:29,462 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:29,502 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:29,866 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:29,870 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:30,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:13:58] 2026-01-09 09:13:32,709 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:13:58] 2026-01-09 09:13:34,098 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:37,763 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:13:58] 2026-01-09 09:13:38,768 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:13:58] 2026-01-09 09:13:40,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973604312896)>', '<ExcThread(monitor, started 139973210646272)>']
[2026-01-09 10:13:58] 2026-01-09 09:13:45,199 | INFO     | all workflow threads have been joined
[2026-01-09 10:13:58] 2026-01-09 09:13:45,200 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:13:58] 2026-01-09 09:13:45,200 | INFO     | traces error code: 0
[2026-01-09 10:13:58] 2026-01-09 09:13:45,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:13:58] 2026-01-09 09:13:58,356 | INFO     | PID=3930507 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:13:58] 2026-01-09 09:13:58,357 | INFO     | .. there are 2 such processes running
[2026-01-09 10:13:58] 2026-01-09 09:13:58,357 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:13:58] 2026-01-09 09:13:58,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:13:58] 2026-01-09 09:13:58,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:13:58] 2026-01-09 09:13:58,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:13:58] 2026-01-09 09:13:58,357 | INFO     | [monitor] control thread has ended
[2026-01-09 10:13:58] 2026-01-09 09:13:58,488 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:13:58] 2026-01-09 09:13:58,491 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:13:58] 2026-01-09 09:13:58,494 [wrapper] pilotpid: 3930507
[2026-01-09 10:13:58] 2026-01-09 09:13:58,496 [wrapper] Pilot exit status: 0
[2026-01-09 10:13:58] 2026-01-09 09:13:58,507 [wrapper] pandaids: 6963146080
[2026-01-09 10:13:58] 2026-01-09 09:13:58,546 [wrapper] cleanup supervisor_pilot 4003703 3930508
[2026-01-09 10:13:58] 2026-01-09 09:13:58,549 [wrapper] Test setup, not cleaning
[2026-01-09 10:13:58] 2026-01-09 09:13:58,552 [wrapper] apfmon messages muted
[2026-01-09 10:13:58] 2026-01-09 09:13:58,555 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:13:58] 2026-01-09 09:13:58,557 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:13:58]  *** Error codes and diagnostics ***
[2026-01-09 10:13:58]     "exeErrorCode": 0,
[2026-01-09 10:13:58]     "exeErrorDiag": "",
[2026-01-09 10:13:58]     "pilotErrorCode": 0,
[2026-01-09 10:13:58]     "pilotErrorDiag": "",
[2026-01-09 10:13:58]  *** Listing of results directory ***
[2026-01-09 10:13:58] total 438004
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 10:13:58] -rwx------ 1 boinc boinc     36322 Jan  8 16:05 runpilot2-wrapper.sh
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc      5112 Jan  8 16:07 queuedata.json
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc       100 Jan  9 07:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:13:58] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 07:34 run_atlas
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc       105 Jan  9 07:34 job.xml
[2026-01-09 10:13:58] -rw-r--r-- 2 boinc boinc 221796922 Jan  9 07:34 EVNT.47898824._001045.pool.root.1
[2026-01-09 10:13:58] drwxrwx--x 2 boinc boinc        68 Jan  9 07:34 shared
[2026-01-09 10:13:58] -rw-r--r-- 2 boinc boinc    592403 Jan  9 07:34 input.tar.gz
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc      6235 Jan  9 07:34 init_data.xml
[2026-01-09 10:13:58] -rw-r--r-- 2 boinc boinc     15847 Jan  9 07:34 start_atlas.sh
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc         0 Jan  9 07:34 boinc_lockfile
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc      2519 Jan  9 07:34 pandaJob.out
[2026-01-09 10:13:58] -rw------- 1 boinc boinc    989771 Jan  9 07:34 agis_schedconf.cvmfs.json
[2026-01-09 10:13:58] -rw------- 1 boinc boinc   1516240 Jan  9 07:34 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:13:58] drwx------ 5 boinc boinc      4096 Jan  9 07:34 pilot3
[2026-01-09 10:13:58] -rw------- 1 boinc boinc 219213113 Jan  9 10:12 HITS.47898826._026510.pool.root.1
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc       531 Jan  9 10:12 boinc_task_state.xml
[2026-01-09 10:13:58] -rw------- 1 boinc boinc      1022 Jan  9 10:13 memory_monitor_summary.json
[2026-01-09 10:13:58] -rw------- 1 boinc boinc    459443 Jan  9 10:13 log.47898826._026510.job.log.tgz.1
[2026-01-09 10:13:58] -rw------- 1 boinc boinc      7797 Jan  9 10:13 heartbeat.json
[2026-01-09 10:13:58] -rw------- 1 boinc boinc        95 Jan  9 10:13 pilot_heartbeat.json
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc      8192 Jan  9 10:13 boinc_mmap_file
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc        28 Jan  9 10:13 wrapper_checkpoint.txt
[2026-01-09 10:13:58] -rw------- 1 boinc boinc       822 Jan  9 10:13 pilotlog.txt
[2026-01-09 10:13:58] -rw------- 1 boinc boinc   1348029 Jan  9 10:13 log.47898826._026510.job.log.1
[2026-01-09 10:13:58] -rw------- 1 boinc boinc       357 Jan  9 10:13 output.list
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc       620 Jan  9 10:13 runtime_log
[2026-01-09 10:13:58] -rw------- 1 boinc boinc   1822720 Jan  9 10:13 result.tar.gz
[2026-01-09 10:13:58] -rw------- 1 boinc boinc       660 Jan  9 10:13 UL4NDmMl6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhYfKDmWPs6Fm.diag
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc      8841 Jan  9 10:13 runtime_log.err
[2026-01-09 10:13:58] -rw-r--r-- 1 boinc boinc     21381 Jan  9 10:13 stderr.txt
[2026-01-09 10:13:58] HITS file was successfully produced:
[2026-01-09 10:13:58] -rw------- 1 boinc boinc 219213113 Jan  9 10:12 shared/HITS.pool.root.1
[2026-01-09 10:13:58]  *** Contents of shared directory: ***
[2026-01-09 10:13:58] total 433052
[2026-01-09 10:13:58] -rw-r--r-- 2 boinc boinc 221796922 Jan  9 07:34 ATLAS.root_0
[2026-01-09 10:13:58] -rw-r--r-- 2 boinc boinc    592403 Jan  9 07:34 input.tar.gz
[2026-01-09 10:13:58] -rw-r--r-- 2 boinc boinc     15847 Jan  9 07:34 start_atlas.sh
[2026-01-09 10:13:58] -rw------- 1 boinc boinc 219213113 Jan  9 10:12 HITS.pool.root.1
[2026-01-09 10:13:58] -rw------- 1 boinc boinc   1822720 Jan  9 10:13 result.tar.gz
10:14:00 (3926664): run_atlas exited; CPU time 104961.021713
10:14:00 (3926664): called boinc_finish(0)

</stderr_txt>
]]>

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