Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:10:11 (20001): wrapper (7.7.26015): starting
07:10:11 (20001): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:10:11] Arguments: --nthreads 8
[2026-01-09 07:10:11] Threads: 8
[2026-01-09 07:10:11] Checking for CVMFS
[2026-01-09 07:10:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:10:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:10:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:10:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:10:11] 2.11.2.0 17366 35020 93404 154933 1 57 15844724 25165824 0 130560 0 16085412 99.820 10692910 3891 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 07:10:11] CVMFS is ok
[2026-01-09 07:10:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:10:11] Checking for apptainer binary...
[2026-01-09 07:10:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:10:11] Running /usr/bin/apptainer --version
[2026-01-09 07:10:11] apptainer version 1.3.2-1.el7
[2026-01-09 07:10:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:10:12] cg-vwn463.simple-grid.lan
[2026-01-09 07:10:12] apptainer works
[2026-01-09 07:10:12] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:10:12] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:10:13] Starting ATLAS job with PandaID=6963145492
[2026-01-09 07:10:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:41:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:41:48] 2026-01-09 08:40:49,730 | INFO     | time since job start (9023s) is within the limit (349056.0s)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,178 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 09:41:48] 2026-01-09 08:40:51,179 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,181 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6963145492/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,181 | INFO     | extracted standard info from prmon json
[2026-01-09 09:41:48] 2026-01-09 08:40:51,182 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:41:48] 2026-01-09 08:40:51,182 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:41:48] 2026-01-09 08:40:51,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:41:48] 2026-01-09 08:40:51,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:41:48] 2026-01-09 08:40:51,186 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:41:48] 2026-01-09 08:40:51,186 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,187 | INFO     | sum of deviations: 12073489965.0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,187 | INFO     | mean x: 1767943539.5
[2026-01-09 09:41:48] 2026-01-09 08:40:51,187 | INFO     | mean y: 2463902.4054054054
[2026-01-09 09:41:48] 2026-01-09 08:40:51,187 | INFO     | intersect: -21232790796.555603
[2026-01-09 09:41:48] 2026-01-09 08:40:51,188 | INFO     | chi2: 2.2037945245395387
[2026-01-09 09:41:48] 2026-01-09 08:40:51,188 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,189 | INFO     | sum of deviations: 21254622047.0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,189 | INFO     | mean x: 1767943387.0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,189 | INFO     | mean y: 2477706.4125874126
[2026-01-09 09:41:48] 2026-01-09 08:40:51,189 | INFO     | intersect: -41441023938.67429
[2026-01-09 09:41:48] 2026-01-09 08:40:51,190 | INFO     | chi2: 1.4336567797098971
[2026-01-09 09:41:48] 2026-01-09 08:40:51,190 | INFO     | current chi2=1.4336567797098971 (change=34.94598685376779 %)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,190 | INFO     | sum of square deviations: 814878534.5
[2026-01-09 09:41:48] 2026-01-09 08:40:51,191 | INFO     | sum of deviations: 20498858185.499996
[2026-01-09 09:41:48] 2026-01-09 08:40:51,191 | INFO     | mean x: 1767943234.5
[2026-01-09 09:41:48] 2026-01-09 08:40:51,191 | INFO     | mean y: 2476450.7608695654
[2026-01-09 09:41:48] 2026-01-09 08:40:51,191 | INFO     | intersect: -44471412736.00806
[2026-01-09 09:41:48] 2026-01-09 08:40:51,192 | INFO     | chi2: 1.4348269443980597
[2026-01-09 09:41:48] 2026-01-09 08:40:51,192 | INFO     | current chi2=1.4348269443980597 (change=-0.08162097823715805 %)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,192 | INFO     | right removable region: 137
[2026-01-09 09:41:48] 2026-01-09 08:40:51,192 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,193 | INFO     | sum of deviations: -8922566562.999998
[2026-01-09 09:41:48] 2026-01-09 08:40:51,193 | INFO     | mean x: 1767943692.0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,193 | INFO     | mean y: 2495869.727272727
[2026-01-09 09:41:48] 2026-01-09 08:40:51,194 | INFO     | intersect: 17400239523.229263
[2026-01-09 09:41:48] 2026-01-09 08:40:51,194 | INFO     | chi2: 0.8285200892602719
[2026-01-09 09:41:48] 2026-01-09 08:40:51,194 | INFO     | current chi2=0.8285200892602719 (change=62.40483946962419 %)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,194 | INFO     | sum of square deviations: 814878534.5
[2026-01-09 09:41:48] 2026-01-09 08:40:51,195 | INFO     | sum of deviations: -11277302318.5
[2026-01-09 09:41:48] 2026-01-09 08:40:51,195 | INFO     | mean x: 1767943844.5
[2026-01-09 09:41:48] 2026-01-09 08:40:51,196 | INFO     | mean y: 2499704.224637681
[2026-01-09 09:41:48] 2026-01-09 08:40:51,196 | INFO     | intersect: 24469504751.53657
[2026-01-09 09:41:48] 2026-01-09 08:40:51,196 | INFO     | chi2: 0.8006773011464544
[2026-01-09 09:41:48] 2026-01-09 08:40:51,196 | INFO     | current chi2=0.8006773011464544 (change=3.3605447200050826 %)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,196 | INFO     | left removable region: 20
[2026-01-09 09:41:48] 2026-01-09 08:40:51,196 | INFO     | sum of square deviations: 496597218.0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,197 | INFO     | sum of deviations: -2164519607.9999995
[2026-01-09 09:41:48] 2026-01-09 08:40:51,197 | INFO     | mean x: 1767943814.0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,197 | INFO     | mean y: 2516671.5555555555
[2026-01-09 09:41:48] 2026-01-09 08:40:51,198 | INFO     | intersect: 7708458051.286169
[2026-01-09 09:41:48] 2026-01-09 08:40:51,198 | INFO     | chi2: 0.00339563679756891
[2026-01-09 09:41:48] 2026-01-09 08:40:51,198 | INFO     | current memory leak: -4.36 B/s (using 117 data points, chi2=0.00)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,199 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,199 | INFO     | ..............................
[2026-01-09 09:41:48] 2026-01-09 08:40:51,199 | INFO     | . Timing measurements:
[2026-01-09 09:41:48] 2026-01-09 08:40:51,199 | INFO     | . get job = 0 s
[2026-01-09 09:41:48] 2026-01-09 08:40:51,199 | INFO     | . initial setup = 1 s
[2026-01-09 09:41:48] 2026-01-09 08:40:51,199 | INFO     | . payload setup = 6 s
[2026-01-09 09:41:48] 2026-01-09 08:40:51,199 | INFO     | . stage-in = 0 s
[2026-01-09 09:41:48] 2026-01-09 08:40:51,199 | INFO     | . payload execution = 8988 s
[2026-01-09 09:41:48] 2026-01-09 08:40:51,199 | INFO     | . stage-out = 1 s
[2026-01-09 09:41:48] 2026-01-09 08:40:51,200 | INFO     | . log creation = 0 s
[2026-01-09 09:41:48] 2026-01-09 08:40:51,200 | INFO     | ..............................
[2026-01-09 09:41:48] 2026-01-09 08:40:51,310 | INFO     | 
[2026-01-09 09:41:48] 2026-01-09 08:40:51,310 | INFO     | job summary report
[2026-01-09 09:41:48] 2026-01-09 08:40:51,310 | INFO     | --------------------------------------------------
[2026-01-09 09:41:48] 2026-01-09 08:40:51,311 | INFO     | PanDA job id: 6963145492
[2026-01-09 09:41:48] 2026-01-09 08:40:51,311 | INFO     | task id: 47898826
[2026-01-09 09:41:48] 2026-01-09 08:40:51,311 | INFO     | errors: (none)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,311 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:41:48] 2026-01-09 08:40:51,311 | INFO     | pilot state: finished 
[2026-01-09 09:41:48] 2026-01-09 08:40:51,311 | INFO     | transexitcode: 0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,311 | INFO     | exeerrorcode: 0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,311 | INFO     | exeerrordiag: 
[2026-01-09 09:41:48] 2026-01-09 08:40:51,312 | INFO     | exitcode: 0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,312 | INFO     | exitmsg: OK
[2026-01-09 09:41:48] 2026-01-09 08:40:51,312 | INFO     | cpuconsumptiontime: 68382 s
[2026-01-09 09:41:48] 2026-01-09 08:40:51,312 | INFO     | nevents: 400
[2026-01-09 09:41:48] 2026-01-09 08:40:51,312 | INFO     | neventsw: 0
[2026-01-09 09:41:48] 2026-01-09 08:40:51,312 | INFO     | pid: 30161
[2026-01-09 09:41:48] 2026-01-09 08:40:51,312 | INFO     | pgrp: 30161
[2026-01-09 09:41:48] 2026-01-09 08:40:51,312 | INFO     | corecount: 8
[2026-01-09 09:41:48] 2026-01-09 08:40:51,313 | INFO     | event service: False
[2026-01-09 09:41:48] 2026-01-09 08:40:51,313 | INFO     | sizes: {0: 2283970, 5: 2284232, 11: 2284288, 8999: 2312111, 9000: 2321111, 9001: 2321167, 9009: 2321489}
[2026-01-09 09:41:48] 2026-01-09 08:40:51,313 | INFO     | --------------------------------------------------
[2026-01-09 09:41:48] 2026-01-09 08:40:51,313 | INFO     | 
[2026-01-09 09:41:48] 2026-01-09 08:40:51,313 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-09 09:41:48] 2026-01-09 08:40:51,335 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,336 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,336 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,336 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,338 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,338 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:41:48] 2026-01-09 08:40:51,338 | INFO     | job 6963145492 has completed (purged errors)
[2026-01-09 09:41:48] 2026-01-09 08:40:51,338 | INFO     | overall cleanup function is called
[2026-01-09 09:41:48] 2026-01-09 08:40:52,346 | INFO     | --- collectZombieJob: --- 10, [30161]
[2026-01-09 09:41:48] 2026-01-09 08:40:52,347 | INFO     | zombie collector waiting for pid 30161
[2026-01-09 09:41:48] 2026-01-09 08:40:52,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:41:48] 2026-01-09 08:40:52,347 | INFO     | collected zombie processes
[2026-01-09 09:41:48] 2026-01-09 08:40:52,347 | INFO     | will attempt to kill all subprocesses of pid=30161
[2026-01-09 09:41:48] 2026-01-09 08:40:52,408 | INFO     | process IDs to be killed: [30161] (in reverse order)
[2026-01-09 09:41:48] 2026-01-09 08:40:52,452 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:41:48] 2026-01-09 08:40:52,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:41:48] 2026-01-09 08:40:52,454 | INFO     | did not find any defunct processes belonging to 30161
[2026-01-09 09:41:48] 2026-01-09 08:40:52,456 | INFO     | did not find any defunct processes belonging to 30161
[2026-01-09 09:41:48] 2026-01-09 08:40:52,456 | INFO     | ready for new job
[2026-01-09 09:41:48] 2026-01-09 08:40:52,456 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:41:48] 2026-01-09 08:40:52,458 | INFO     | ***************************************
[2026-01-09 09:41:48] 2026-01-09 08:40:52,458 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:41:48] 2026-01-09 08:40:52,458 | INFO     | ***************************************
[2026-01-09 09:41:48] 2026-01-09 08:40:52,458 | INFO     | 
[2026-01-09 09:41:48] 2026-01-09 08:40:52,459 | INFO     | pilot is running in a VM
[2026-01-09 09:41:48] 2026-01-09 08:40:52,459 | INFO     | architecture information:
[2026-01-09 09:41:48] 2026-01-09 08:40:52,460 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:41:48] 2026-01-09 08:40:52,478 | INFO     | cat /etc/os-release:
[2026-01-09 09:41:48] NAME="CentOS Linux"
[2026-01-09 09:41:48] VERSION="7 (Core)"
[2026-01-09 09:41:48] ID="centos"
[2026-01-09 09:41:48] ID_LIKE="rhel fedora"
[2026-01-09 09:41:48] VERSION_ID="7"
[2026-01-09 09:41:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:41:48] ANSI_COLOR="0;31"
[2026-01-09 09:41:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:41:48] HOME_URL="https://www.centos.org/"
[2026-01-09 09:41:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:41:48] 
[2026-01-09 09:41:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:41:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:41:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:41:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:41:48] 
[2026-01-09 09:41:48] 2026-01-09 08:40:52,478 | INFO     | ***************************************
[2026-01-09 09:41:48] 2026-01-09 08:40:52,981 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-09 09:41:48] 2026-01-09 08:40:53,004 | INFO     | sufficient remaining disk space (498285412352 B)
[2026-01-09 09:41:48] 2026-01-09 08:40:53,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:41:48] 2026-01-09 08:40:53,005 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:41:48] 2026-01-09 08:40:53,005 | INFO     | update_server=False
[2026-01-09 09:41:48] 2026-01-09 08:40:53,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:41:48] 2026-01-09 08:40:53,005 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:41:48] 2026-01-09 08:40:53,006 | INFO     | aborting loop
[2026-01-09 09:41:48] 2026-01-09 08:40:53,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:41:48] 2026-01-09 08:40:53,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:41:48] 2026-01-09 08:40:53,163 | INFO     | all data control threads have been joined
[2026-01-09 09:41:48] 2026-01-09 08:40:53,729 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:41:48] 2026-01-09 08:40:54,011 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:54,012 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:54,013 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:54,115 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:54,158 | INFO     | all payload control threads have been joined
[2026-01-09 09:41:48] 2026-01-09 08:40:54,169 | INFO     | [data] control thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:54,566 | INFO     | all job control threads have been joined
[2026-01-09 09:41:48] 2026-01-09 08:40:54,820 | INFO     | [job] validate thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:54,920 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:55,012 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:55,023 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:55,147 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:55,161 | INFO     | [payload] control thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:55,448 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:55,534 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:55,572 | INFO     | [job] control thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:40:57,733 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:41:03,496 | INFO     | job.realtimelogging is not enabled
[2026-01-09 09:41:48] 2026-01-09 08:41:04,501 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:41:48] 2026-01-09 08:41:22,812 | INFO     | PID=23730 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:41:48] 2026-01-09 08:41:22,813 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:41:48] 2026-01-09 08:41:22,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:41:48] 2026-01-09 08:41:22,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:41:48] 2026-01-09 08:41:40,989 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:41:48] 2026-01-09 08:41:43,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883058923328)>', '<ExcThread(monitor, started 139882152310528)>']
[2026-01-09 09:41:48] 2026-01-09 08:41:43,921 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:41:48] 2026-01-09 08:41:43,922 | INFO     | [monitor] control thread has ended
[2026-01-09 09:41:48] 2026-01-09 08:41:48,112 | INFO     | all workflow threads have been joined
[2026-01-09 09:41:48] 2026-01-09 08:41:48,112 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:41:48] 2026-01-09 08:41:48,113 | INFO     | traces error code: 0
[2026-01-09 09:41:48] 2026-01-09 08:41:48,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:41:48] 2026-01-09 08:41:48,252 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:41:48] 2026-01-09 08:41:48,259 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:41:48] 2026-01-09 08:41:48,268 [wrapper] pilotpid: 23730
[2026-01-09 09:41:48] 2026-01-09 08:41:48,277 [wrapper] Pilot exit status: 0
[2026-01-09 09:41:48] 2026-01-09 08:41:48,304 [wrapper] pandaids: 6963145492
[2026-01-09 09:41:48] 2026-01-09 08:41:48,366 [wrapper] cleanup supervisor_pilot 14246 23731
[2026-01-09 09:41:48] 2026-01-09 08:41:48,370 [wrapper] Test setup, not cleaning
[2026-01-09 09:41:48] 2026-01-09 08:41:48,376 [wrapper] apfmon messages muted
[2026-01-09 09:41:48] 2026-01-09 08:41:48,380 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:41:48] 2026-01-09 08:41:48,384 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:41:48]  *** Error codes and diagnostics ***
[2026-01-09 09:41:48]     "exeErrorCode": 0,
[2026-01-09 09:41:48]     "exeErrorDiag": "",
[2026-01-09 09:41:48]     "pilotErrorCode": 0,
[2026-01-09 09:41:48]     "pilotErrorDiag": "",
[2026-01-09 09:41:48]  *** Listing of results directory ***
[2026-01-09 09:41:48] total 438640
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 09:41:48] -rwx------. 1 boinc boinc     36322 Jan  8 16:05 runpilot2-wrapper.sh
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc      5112 Jan  8 16:06 queuedata.json
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc       100 Jan  9 07:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:41:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 07:10 run_atlas
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc       105 Jan  9 07:10 job.xml
[2026-01-09 09:41:48] -rw-r--r--. 2 boinc boinc 224037141 Jan  9 07:10 EVNT.47898824._000350.pool.root.1
[2026-01-09 09:41:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:10 start_atlas.sh
[2026-01-09 09:41:48] drwxrwx--x. 2 boinc boinc        68 Jan  9 07:10 shared
[2026-01-09 09:41:48] -rw-r--r--. 2 boinc boinc    592393 Jan  9 07:10 input.tar.gz
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc      6390 Jan  9 07:10 init_data.xml
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc         0 Jan  9 07:10 boinc_lockfile
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc      2519 Jan  9 07:10 pandaJob.out
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc    989771 Jan  9 07:10 agis_schedconf.cvmfs.json
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc   1516240 Jan  9 07:10 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:41:48] drwx------. 5 boinc boinc      4096 Jan  9 07:10 pilot3
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc 218051425 Jan  9 09:40 HITS.47898826._026175.pool.root.1
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc       530 Jan  9 09:40 boinc_task_state.xml
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc      1015 Jan  9 09:40 memory_monitor_summary.json
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc    375766 Jan  9 09:40 log.47898826._026175.job.log.tgz.1
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc      7770 Jan  9 09:40 heartbeat.json
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:41 boinc_mmap_file
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc        27 Jan  9 09:41 wrapper_checkpoint.txt
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc        95 Jan  9 09:41 pilot_heartbeat.json
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc      4882 Jan  9 09:41 pilotlog.txt
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc   1213640 Jan  9 09:41 log.47898826._026175.job.log.1
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc       357 Jan  9 09:41 output.list
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:41 runtime_log
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc   1607680 Jan  9 09:41 result.tar.gz
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc      8832 Jan  9 09:41 runtime_log.err
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc       652 Jan  9 09:41 5QJKDmCl6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYjkKDmuRcKnn.diag
[2026-01-09 09:41:48] -rw-r--r--. 1 boinc boinc     20704 Jan  9 09:41 stderr.txt
[2026-01-09 09:41:48] HITS file was successfully produced:
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc 218051425 Jan  9 09:40 shared/HITS.pool.root.1
[2026-01-09 09:41:48]  *** Contents of shared directory: ***
[2026-01-09 09:41:48] total 433900
[2026-01-09 09:41:48] -rw-r--r--. 2 boinc boinc 224037141 Jan  9 07:10 ATLAS.root_0
[2026-01-09 09:41:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:10 start_atlas.sh
[2026-01-09 09:41:48] -rw-r--r--. 2 boinc boinc    592393 Jan  9 07:10 input.tar.gz
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc 218051425 Jan  9 09:40 HITS.pool.root.1
[2026-01-09 09:41:48] -rw-------. 1 boinc boinc   1607680 Jan  9 09:41 result.tar.gz
09:41:49 (20001): run_atlas exited; CPU time 68436.940357
09:41:49 (20001): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN