Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
18:41:18 (2865382): wrapper (7.7.26015): starting
18:41:18 (2865382): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 18:41:18] Arguments: --nthreads 12
[2026-01-09 18:41:18] Threads: 12
[2026-01-09 18:41:18] Checking for CVMFS
[2026-01-09 18:41:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:41:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:41:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:41:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:41:18] 2.12.7.0 2330541 2444 64764 154951 2 56 3083941 4096001 0 130560 0 1451430 99.944 93588 42 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-09 18:41:18] CVMFS is ok
[2026-01-09 18:41:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:41:18] Checking for apptainer binary...
[2026-01-09 18:41:18] apptainer is not installed, using version from CVMFS
[2026-01-09 18:41:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:41:19] lithium
[2026-01-09 18:41:19] apptainer works
[2026-01-09 18:41:19] Set ATHENA_PROC_NUMBER=12
[2026-01-09 18:41:19] Set ATHENA_CORE_NUMBER=12
[2026-01-09 18:41:19] Starting ATLAS job with PandaID=6963144948
[2026-01-09 18:41:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:53:50]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:53:50] 2026-01-09 19:53:16,849 | INFO     | time since job start (7906s) is within the limit (349056.0s)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,226 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 20:53:50] 2026-01-09 19:53:17,228 | INFO     | found 8 cores (4 cores per socket, 2 sockets) HT, CPU MHz: 2283.2835625000002
[2026-01-09 20:53:50] 2026-01-09 19:53:17,230 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6963144948/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,230 | INFO     | extracted standard info from prmon json
[2026-01-09 20:53:50] 2026-01-09 19:53:17,230 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:53:50] 2026-01-09 19:53:17,230 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:53:50] 2026-01-09 19:53:17,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:53:50] 2026-01-09 19:53:17,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:53:50] 2026-01-09 19:53:17,233 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:53:50] 2026-01-09 19:53:17,233 | INFO     | sum of square deviations: 681212772.5
[2026-01-09 20:53:50] 2026-01-09 19:53:17,234 | INFO     | sum of deviations: -15177080477.999998
[2026-01-09 20:53:50] 2026-01-09 19:53:17,234 | INFO     | mean x: 1767984446.5
[2026-01-09 20:53:50] 2026-01-09 19:53:17,234 | INFO     | mean y: 2734655.5076923077
[2026-01-09 20:53:50] 2026-01-09 19:53:17,234 | INFO     | intersect: 39392545462.94199
[2026-01-09 20:53:50] 2026-01-09 19:53:17,234 | INFO     | chi2: 2.255964522453307
[2026-01-09 20:53:50] 2026-01-09 19:53:17,235 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,235 | INFO     | sum of deviations: -5567465730.000002
[2026-01-09 20:53:50] 2026-01-09 19:53:17,235 | INFO     | mean x: 1767984294.0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,235 | INFO     | mean y: 2753480.992
[2026-01-09 20:53:50] 2026-01-09 19:53:17,235 | INFO     | intersect: 16256567563.183783
[2026-01-09 20:53:50] 2026-01-09 19:53:17,236 | INFO     | chi2: 1.5698423778147408
[2026-01-09 20:53:50] 2026-01-09 19:53:17,236 | INFO     | current chi2=1.5698423778147408 (change=30.413693912722746 %)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,236 | INFO     | sum of square deviations: 535786790.0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,236 | INFO     | sum of deviations: -4948763500.499997
[2026-01-09 20:53:50] 2026-01-09 19:53:17,237 | INFO     | mean x: 1767984141.5
[2026-01-09 20:53:50] 2026-01-09 19:53:17,237 | INFO     | mean y: 2754834.275
[2026-01-09 20:53:50] 2026-01-09 19:53:17,237 | INFO     | intersect: 16332637452.168625
[2026-01-09 20:53:50] 2026-01-09 19:53:17,237 | INFO     | chi2: 1.569729807769471
[2026-01-09 20:53:50] 2026-01-09 19:53:17,237 | INFO     | current chi2=1.569729807769471 (change=0.007170786498098408 %)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,237 | INFO     | right removable region: 119
[2026-01-09 20:53:50] 2026-01-09 19:53:17,237 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,238 | INFO     | sum of deviations: -33800790642.00004
[2026-01-09 20:53:50] 2026-01-09 19:53:17,238 | INFO     | mean x: 1767984599.0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,238 | INFO     | mean y: 2771478.088
[2026-01-09 20:53:50] 2026-01-09 19:53:17,238 | INFO     | intersect: 98681755480.25676
[2026-01-09 20:53:50] 2026-01-09 19:53:17,238 | INFO     | chi2: 0.9415880629855317
[2026-01-09 20:53:50] 2026-01-09 19:53:17,239 | INFO     | current chi2=0.9415880629855317 (change=58.26228410890179 %)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,239 | INFO     | sum of square deviations: 535786790.0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,239 | INFO     | sum of deviations: -32454825489.499996
[2026-01-09 20:53:50] 2026-01-09 19:53:17,239 | INFO     | mean x: 1767984751.5
[2026-01-09 20:53:50] 2026-01-09 19:53:17,239 | INFO     | mean y: 2768355.658333333
[2026-01-09 20:53:50] 2026-01-09 19:53:17,240 | INFO     | intersect: 107096929034.8149
[2026-01-09 20:53:50] 2026-01-09 19:53:17,240 | INFO     | chi2: 0.9093556659956316
[2026-01-09 20:53:50] 2026-01-09 19:53:17,240 | INFO     | current chi2=0.9093556659956316 (change=3.423195159006108 %)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,240 | INFO     | left removable region: 20
[2026-01-09 20:53:50] 2026-01-09 19:53:17,240 | INFO     | sum of square deviations: 300842850.0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,241 | INFO     | sum of deviations: -11530025776.0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,241 | INFO     | mean x: 1767984721.0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,241 | INFO     | mean y: 2763828.9595959596
[2026-01-09 20:53:50] 2026-01-09 19:53:17,241 | INFO     | intersect: 67762092012.1096
[2026-01-09 20:53:50] 2026-01-09 19:53:17,241 | INFO     | chi2: 0.14849050375527334
[2026-01-09 20:53:50] 2026-01-09 19:53:17,241 | INFO     | current memory leak: -38.33 B/s (using 99 data points, chi2=0.15)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,241 | INFO     | could have reported an average CPU frequency of 2635 MHz (8 samples)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,242 | INFO     | ..............................
[2026-01-09 20:53:50] 2026-01-09 19:53:17,242 | INFO     | . Timing measurements:
[2026-01-09 20:53:50] 2026-01-09 19:53:17,242 | INFO     | . get job = 0 s
[2026-01-09 20:53:50] 2026-01-09 19:53:17,242 | INFO     | . initial setup = 1 s
[2026-01-09 20:53:50] 2026-01-09 19:53:17,242 | INFO     | . payload setup = 4 s
[2026-01-09 20:53:50] 2026-01-09 19:53:17,242 | INFO     | . stage-in = 0 s
[2026-01-09 20:53:50] 2026-01-09 19:53:17,242 | INFO     | . payload execution = 7878 s
[2026-01-09 20:53:50] 2026-01-09 19:53:17,242 | INFO     | . stage-out = 0 s
[2026-01-09 20:53:50] 2026-01-09 19:53:17,242 | INFO     | . log creation = 0 s
[2026-01-09 20:53:50] 2026-01-09 19:53:17,242 | INFO     | ..............................
[2026-01-09 20:53:50] 2026-01-09 19:53:17,316 | INFO     | 
[2026-01-09 20:53:50] 2026-01-09 19:53:17,316 | INFO     | job summary report
[2026-01-09 20:53:50] 2026-01-09 19:53:17,316 | INFO     | --------------------------------------------------
[2026-01-09 20:53:50] 2026-01-09 19:53:17,316 | INFO     | PanDA job id: 6963144948
[2026-01-09 20:53:50] 2026-01-09 19:53:17,316 | INFO     | task id: 47898826
[2026-01-09 20:53:50] 2026-01-09 19:53:17,316 | INFO     | errors: (none)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,316 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | pilot state: finished 
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | transexitcode: 0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | exeerrorcode: 0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | exeerrordiag: 
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | exitcode: 0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | exitmsg: OK
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | cpuconsumptiontime: 88320 s
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | nevents: 400
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | neventsw: 0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | pid: 2875808
[2026-01-09 20:53:50] 2026-01-09 19:53:17,317 | INFO     | pgrp: 2875808
[2026-01-09 20:53:50] 2026-01-09 19:53:17,318 | INFO     | corecount: 12
[2026-01-09 20:53:50] 2026-01-09 19:53:17,318 | INFO     | event service: False
[2026-01-09 20:53:50] 2026-01-09 19:53:17,318 | INFO     | sizes: {0: 2283976, 3: 2284238, 11: 2284266, 7886: 2312025, 7887: 2321092, 7890: 2321092, 7893: 2321414}
[2026-01-09 20:53:50] 2026-01-09 19:53:17,318 | INFO     | --------------------------------------------------
[2026-01-09 20:53:50] 2026-01-09 19:53:17,318 | INFO     | 
[2026-01-09 20:53:50] 2026-01-09 19:53:17,318 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-09 20:53:50] 2026-01-09 19:53:17,335 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,336 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,336 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,336 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,337 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,338 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:53:50] 2026-01-09 19:53:17,338 | INFO     | job 6963144948 has completed (purged errors)
[2026-01-09 20:53:50] 2026-01-09 19:53:17,338 | INFO     | overall cleanup function is called
[2026-01-09 20:53:50] 2026-01-09 19:53:18,345 | INFO     | --- collectZombieJob: --- 10, [2875808]
[2026-01-09 20:53:50] 2026-01-09 19:53:18,345 | INFO     | zombie collector waiting for pid 2875808
[2026-01-09 20:53:50] 2026-01-09 19:53:18,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:53:50] 2026-01-09 19:53:18,345 | INFO     | collected zombie processes
[2026-01-09 20:53:50] 2026-01-09 19:53:18,345 | INFO     | will attempt to kill all subprocesses of pid=2875808
[2026-01-09 20:53:50] 2026-01-09 19:53:18,417 | INFO     | process IDs to be killed: [2875808] (in reverse order)
[2026-01-09 20:53:50] 2026-01-09 19:53:18,452 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:53:50] 2026-01-09 19:53:18,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:53:50] 2026-01-09 19:53:18,455 | INFO     | did not find any defunct processes belonging to 2875808
[2026-01-09 20:53:50] 2026-01-09 19:53:18,458 | INFO     | did not find any defunct processes belonging to 2875808
[2026-01-09 20:53:50] 2026-01-09 19:53:18,458 | INFO     | ready for new job
[2026-01-09 20:53:50] 2026-01-09 19:53:18,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:53:50] 2026-01-09 19:53:18,459 | INFO     | ***************************************
[2026-01-09 20:53:50] 2026-01-09 19:53:18,459 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:53:50] 2026-01-09 19:53:18,459 | INFO     | ***************************************
[2026-01-09 20:53:50] 2026-01-09 19:53:18,460 | INFO     | 
[2026-01-09 20:53:50] 2026-01-09 19:53:18,478 | INFO     | architecture information:
[2026-01-09 20:53:50] 2026-01-09 19:53:18,479 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:53:50] 2026-01-09 19:53:18,494 | INFO     | cat /etc/os-release:
[2026-01-09 20:53:50] NAME="CentOS Linux"
[2026-01-09 20:53:50] VERSION="7 (Core)"
[2026-01-09 20:53:50] ID="centos"
[2026-01-09 20:53:50] ID_LIKE="rhel fedora"
[2026-01-09 20:53:50] VERSION_ID="7"
[2026-01-09 20:53:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:53:50] ANSI_COLOR="0;31"
[2026-01-09 20:53:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:53:50] HOME_URL="https://www.centos.org/"
[2026-01-09 20:53:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:53:50] 
[2026-01-09 20:53:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:53:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:53:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:53:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:53:50] 
[2026-01-09 20:53:50] 2026-01-09 19:53:18,494 | INFO     | ***************************************
[2026-01-09 20:53:50] 2026-01-09 19:53:18,997 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-09 20:53:50] 2026-01-09 19:53:19,009 | INFO     | sufficient remaining disk space (35103178752 B)
[2026-01-09 20:53:50] 2026-01-09 19:53:19,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:53:50] 2026-01-09 19:53:19,010 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:53:50] 2026-01-09 19:53:19,010 | INFO     | update_server=False
[2026-01-09 20:53:50] 2026-01-09 19:53:19,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:53:50] 2026-01-09 19:53:19,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:53:50] 2026-01-09 19:53:19,011 | INFO     | aborting loop
[2026-01-09 20:53:50] 2026-01-09 19:53:19,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:53:50] 2026-01-09 19:53:19,365 | INFO     | all data control threads have been joined
[2026-01-09 20:53:50] 2026-01-09 19:53:19,760 | INFO     | all payload control threads have been joined
[2026-01-09 20:53:50] 2026-01-09 19:53:19,853 | INFO     | all job control threads have been joined
[2026-01-09 20:53:50] 2026-01-09 19:53:20,016 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:20,016 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:20,016 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:20,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:53:50] 2026-01-09 19:53:20,370 | INFO     | [data] control thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:20,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:53:50] 2026-01-09 19:53:20,522 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:20,766 | INFO     | [payload] control thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:20,858 | INFO     | [job] control thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:20,885 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:20,916 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:20,939 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:21,273 | INFO     | [job] validate thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:21,459 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:21,550 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:22,213 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:24,469 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:29,225 | INFO     | job.realtimelogging is not enabled
[2026-01-09 20:53:50] 2026-01-09 19:53:30,231 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:53:50] 2026-01-09 19:53:42,441 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:53:50] 2026-01-09 19:53:44,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744948258624)>', '<ExcThread(monitor, started 139744495245056)>']
[2026-01-09 20:53:50] 2026-01-09 19:53:49,058 | INFO     | all workflow threads have been joined
[2026-01-09 20:53:50] 2026-01-09 19:53:49,058 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:53:50] 2026-01-09 19:53:49,059 | INFO     | traces error code: 0
[2026-01-09 20:53:50] 2026-01-09 19:53:49,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:53:50] 2026-01-09 19:53:50,037 | INFO     | PID=2869213 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:53:50] 2026-01-09 19:53:50,039 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:53:50] 2026-01-09 19:53:50,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:53:50] 2026-01-09 19:53:50,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:53:50] 2026-01-09 19:53:50,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:53:50] 2026-01-09 19:53:50,039 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 20:53:50] 2026-01-09 19:53:50,039 | INFO     | [monitor] control thread has ended
[2026-01-09 20:53:50] 2026-01-09 19:53:50,123 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:53:50] 2026-01-09 19:53:50,126 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:53:50] 2026-01-09 19:53:50,128 [wrapper] pilotpid: 2869213
[2026-01-09 20:53:50] 2026-01-09 19:53:50,130 [wrapper] Pilot exit status: 0
[2026-01-09 20:53:50] 2026-01-09 19:53:50,139 [wrapper] pandaids: 6963144948
[2026-01-09 20:53:50] 2026-01-09 19:53:50,162 [wrapper] cleanup supervisor_pilot 2890063 2869214
[2026-01-09 20:53:50] 2026-01-09 19:53:50,164 [wrapper] Test setup, not cleaning
[2026-01-09 20:53:50] 2026-01-09 19:53:50,167 [wrapper] apfmon messages muted
[2026-01-09 20:53:50] 2026-01-09 19:53:50,169 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:53:50] 2026-01-09 19:53:50,171 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:53:50]  *** Error codes and diagnostics ***
[2026-01-09 20:53:50]     "exeErrorCode": 0,
[2026-01-09 20:53:50]     "exeErrorDiag": "",
[2026-01-09 20:53:50]     "pilotErrorCode": 0,
[2026-01-09 20:53:50]     "pilotErrorDiag": "",
[2026-01-09 20:53:50]  *** Listing of results directory ***
[2026-01-09 20:53:50] total 443996
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 20:53:50] -rwx------ 1 boinc boinc     36322 Jan  8 16:05 runpilot2-wrapper.sh
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc      5112 Jan  8 16:06 queuedata.json
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc       100 Jan  9 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:53:50] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 18:41 run_atlas
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc       105 Jan  9 18:41 job.xml
[2026-01-09 20:53:50] -rw-r--r-- 2 boinc boinc     15847 Jan  9 18:41 start_atlas.sh
[2026-01-09 20:53:50] drwxrwx--x 2 boinc boinc      4096 Jan  9 18:41 shared
[2026-01-09 20:53:50] -rw-r--r-- 2 boinc boinc    592400 Jan  9 18:41 input.tar.gz
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc      6045 Jan  9 18:41 init_data.xml
[2026-01-09 20:53:50] -rw-r--r-- 2 boinc boinc 227074352 Jan  9 18:41 EVNT.47898824._001039.pool.root.1
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc         0 Jan  9 18:41 boinc_lockfile
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc      2519 Jan  9 18:41 pandaJob.out
[2026-01-09 20:53:50] -rw------- 1 boinc boinc    989356 Jan  9 18:41 agis_schedconf.cvmfs.json
[2026-01-09 20:53:50] -rw------- 1 boinc boinc   1516240 Jan  9 18:41 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:53:50] drwx------ 5 boinc boinc      4096 Jan  9 18:41 pilot3
[2026-01-09 20:53:50] -rw------- 1 boinc boinc 220571925 Jan  9 20:52 HITS.47898826._025928.pool.root.1
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc       530 Jan  9 20:52 boinc_task_state.xml
[2026-01-09 20:53:50] -rw------- 1 boinc boinc      1066 Jan  9 20:53 memory_monitor_summary.json
[2026-01-09 20:53:50] -rw------- 1 boinc boinc    433091 Jan  9 20:53 log.47898826._025928.job.log.tgz.1
[2026-01-09 20:53:50] -rw------- 1 boinc boinc      7840 Jan  9 20:53 heartbeat.json
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc      8192 Jan  9 20:53 boinc_mmap_file
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc        27 Jan  9 20:53 wrapper_checkpoint.txt
[2026-01-09 20:53:50] -rw------- 1 boinc boinc       817 Jan  9 20:53 pilotlog.txt
[2026-01-09 20:53:50] -rw------- 1 boinc boinc        95 Jan  9 20:53 pilot_heartbeat.json
[2026-01-09 20:53:50] -rw------- 1 boinc boinc   1110924 Jan  9 20:53 log.47898826._025928.job.log.1
[2026-01-09 20:53:50] -rw------- 1 boinc boinc       357 Jan  9 20:53 output.list
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc       620 Jan  9 20:53 runtime_log
[2026-01-09 20:53:50] -rw------- 1 boinc boinc   1566720 Jan  9 20:53 result.tar.gz
[2026-01-09 20:53:50] -rw------- 1 boinc boinc       653 Jan  9 20:53 tzxMDm0k6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9ikKDmtDTrOn.diag
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc      8888 Jan  9 20:53 runtime_log.err
[2026-01-09 20:53:50] -rw-r--r-- 1 boinc boinc     20759 Jan  9 20:53 stderr.txt
[2026-01-09 20:53:50] HITS file was successfully produced:
[2026-01-09 20:53:50] -rw------- 1 boinc boinc 220571925 Jan  9 20:52 shared/HITS.pool.root.1
[2026-01-09 20:53:50]  *** Contents of shared directory: ***
[2026-01-09 20:53:50] total 439296
[2026-01-09 20:53:50] -rw-r--r-- 2 boinc boinc     15847 Jan  9 18:41 start_atlas.sh
[2026-01-09 20:53:50] -rw-r--r-- 2 boinc boinc    592400 Jan  9 18:41 input.tar.gz
[2026-01-09 20:53:50] -rw-r--r-- 2 boinc boinc 227074352 Jan  9 18:41 ATLAS.root_0
[2026-01-09 20:53:50] -rw------- 1 boinc boinc 220571925 Jan  9 20:52 HITS.pool.root.1
[2026-01-09 20:53:50] -rw------- 1 boinc boinc   1566720 Jan  9 20:53 result.tar.gz
20:53:51 (2865382): run_atlas exited; CPU time 88194.086540
20:53:51 (2865382): called boinc_finish(0)

</stderr_txt>
]]>

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