Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:10 (1296880): wrapper (7.7.26015): starting
00:01:10 (1296880): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:01:10] Arguments: --nthreads 12
[2026-01-09 00:01:10] Threads: 12
[2026-01-09 00:01:10] Checking for CVMFS
[2026-01-09 00:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:01:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:01:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:01:13] 2.13.3.0 7069 23095 253116 154931 3 268 21881327 40960001 14715 16776704 0 34509190 99.827 47409822 31902 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:01:13] CVMFS is ok
[2026-01-09 00:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:01:13] Further information can be found at the LHC@home message board.
[2026-01-09 00:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:01:13] Checking for apptainer binary...
[2026-01-09 00:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:01:13] Running /usr/bin/apptainer --version
[2026-01-09 00:01:14] apptainer version 1.4.5-2.el9
[2026-01-09 00:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:01:15] c-210-35-3.aglt2.org
[2026-01-09 00:01:15] apptainer works
[2026-01-09 00:01:15] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:01:15] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:01:15] Starting ATLAS job with PandaID=6963146355
[2026-01-09 00:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:47:44 (2373097): wrapper (7.7.26015): starting
06:47:44 (2373097): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 06:47:44] Arguments: --nthreads 11
[2026-01-09 06:47:44] Threads: 11
[2026-01-09 06:47:44] This job has been restarted, cleaning up previous attempt
[2026-01-09 06:47:45] Checking for CVMFS
[2026-01-09 06:47:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:47:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:47:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:47:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:47:47] 2.13.3.0 7069 23502 249044 154942 1 72 23891839 40960001 13673 16776704 0 35575963 99.827 47874363 31946 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 06:47:47] CVMFS is ok
[2026-01-09 06:47:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:47:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:47:47] Further information can be found at the LHC@home message board.
[2026-01-09 06:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:47:47] Checking for apptainer binary...
[2026-01-09 06:47:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:47:48] Running /usr/bin/apptainer --version
[2026-01-09 06:47:48] apptainer version 1.4.5-2.el9
[2026-01-09 06:47:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:47:48] c-210-35-3.aglt2.org
[2026-01-09 06:47:48] apptainer works
[2026-01-09 06:47:49] Set ATHENA_PROC_NUMBER=11
[2026-01-09 06:47:49] Set ATHENA_CORE_NUMBER=11
[2026-01-09 06:47:49] Starting ATLAS job with PandaID=6963146355
[2026-01-09 06:47:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:27:04 (3057122): wrapper (7.7.26015): starting
11:27:04 (3057122): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:27:04] Arguments: --nthreads 8
[2026-01-09 11:27:04] Threads: 8
[2026-01-09 11:27:04] This job has been restarted, cleaning up previous attempt
[2026-01-09 11:27:05] Checking for CVMFS
[2026-01-09 11:27:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:27:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:27:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:27:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:27:06] 2.13.3.0 7069 23781 249388 154950 3 182 25007550 40960001 13607 16776704 0 36099732 99.827 48135432 31847 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 11:27:06] CVMFS is ok
[2026-01-09 11:27:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:27:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:27:06] Further information can be found at the LHC@home message board.
[2026-01-09 11:27:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:27:06] Checking for apptainer binary...
[2026-01-09 11:27:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:27:06] Running /usr/bin/apptainer --version
[2026-01-09 11:27:06] apptainer version 1.4.5-2.el9
[2026-01-09 11:27:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:27:07] c-210-35-3.aglt2.org
[2026-01-09 11:27:07] apptainer works
[2026-01-09 11:27:07] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:27:07] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:27:07] Starting ATLAS job with PandaID=6963146355
[2026-01-09 11:27:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:55:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:55:39] 2026-01-09 22:55:04,273 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963146355/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:55:39] 2026-01-09 22:55:04,274 | INFO     | extracted standard info from prmon json
[2026-01-09 17:55:39] 2026-01-09 22:55:04,274 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:55:39] 2026-01-09 22:55:04,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:55:39] 2026-01-09 22:55:04,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:55:39] 2026-01-09 22:55:04,275 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:55:39] 2026-01-09 22:55:04,281 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:55:39] 2026-01-09 22:55:04,282 | INFO     | sum of square deviations: 17014451576.239456
[2026-01-09 17:55:39] 2026-01-09 22:55:04,285 | INFO     | sum of deviations: 40561576139.88685
[2026-01-09 17:55:39] 2026-01-09 22:55:04,286 | INFO     | mean x: 1767987707.9552631
[2026-01-09 17:55:39] 2026-01-09 22:55:04,286 | INFO     | mean y: 2510730.581578947
[2026-01-09 17:55:39] 2026-01-09 22:55:04,286 | INFO     | intersect: -4212280895.776639
[2026-01-09 17:55:39] 2026-01-09 22:55:04,286 | INFO     | chi2: 2.633155581248899
[2026-01-09 17:55:39] 2026-01-09 22:55:04,287 | INFO     | sum of square deviations: 16351664005.189308
[2026-01-09 17:55:39] 2026-01-09 22:55:04,290 | INFO     | sum of deviations: 65204246332.78136
[2026-01-09 17:55:39] 2026-01-09 22:55:04,291 | INFO     | mean x: 1767987555.4613333
[2026-01-09 17:55:39] 2026-01-09 22:55:04,291 | INFO     | mean y: 2516337.1573333335
[2026-01-09 17:55:39] 2026-01-09 22:55:04,291 | INFO     | intersect: -7047548784.227729
[2026-01-09 17:55:39] 2026-01-09 22:55:04,291 | INFO     | chi2: 1.8465961326422236
[2026-01-09 17:55:39] 2026-01-09 22:55:04,291 | INFO     | current chi2=1.8465961326422236 (change=29.871362490233576 %)
[2026-01-09 17:55:39] 2026-01-09 22:55:04,292 | INFO     | sum of square deviations: 15706318621.61075
[2026-01-09 17:55:39] 2026-01-09 22:55:04,295 | INFO     | sum of deviations: 63137303815.67571
[2026-01-09 17:55:39] 2026-01-09 22:55:04,295 | INFO     | mean x: 1767987402.9675677
[2026-01-09 17:55:39] 2026-01-09 22:55:04,295 | INFO     | mean y: 2515848.472972973
[2026-01-09 17:55:39] 2026-01-09 22:55:04,295 | INFO     | intersect: -7104557457.03489
[2026-01-09 17:55:39] 2026-01-09 22:55:04,296 | INFO     | chi2: 1.8468615902030314
[2026-01-09 17:55:39] 2026-01-09 22:55:04,296 | INFO     | current chi2=1.8468615902030314 (change=-0.014375507243591809 %)
[2026-01-09 17:55:39] 2026-01-09 22:55:04,296 | INFO     | right removable region: 369
[2026-01-09 17:55:39] 2026-01-09 22:55:04,297 | INFO     | sum of square deviations: 16351558475.189308
[2026-01-09 17:55:39] 2026-01-09 22:55:04,300 | INFO     | sum of deviations: -32602019279.621346
[2026-01-09 17:55:39] 2026-01-09 22:55:04,300 | INFO     | mean x: 1767987860.4613333
[2026-01-09 17:55:39] 2026-01-09 22:55:04,300 | INFO     | mean y: 2527492.9226666666
[2026-01-09 17:55:39] 2026-01-09 22:55:04,300 | INFO     | intersect: 3527572179.0518622
[2026-01-09 17:55:39] 2026-01-09 22:55:04,301 | INFO     | chi2: 0.9057219018835775
[2026-01-09 17:55:39] 2026-01-09 22:55:04,301 | INFO     | current chi2=0.9057219018835775 (change=65.60317558395103 %)
[2026-01-09 17:55:39] 2026-01-09 22:55:04,301 | INFO     | sum of square deviations: 15706153311.470268
[2026-01-09 17:55:39] 2026-01-09 22:55:04,304 | INFO     | sum of deviations: -47903979515.86491
[2026-01-09 17:55:39] 2026-01-09 22:55:04,304 | INFO     | mean x: 1767988012.9621623
[2026-01-09 17:55:39] 2026-01-09 22:55:04,304 | INFO     | mean y: 2531106.581081081
[2026-01-09 17:55:39] 2026-01-09 22:55:04,304 | INFO     | intersect: 5394918400.762273
[2026-01-09 17:55:39] 2026-01-09 22:55:04,305 | INFO     | chi2: 0.8415588231978602
[2026-01-09 17:55:39] 2026-01-09 22:55:04,305 | INFO     | current chi2=0.8415588231978602 (change=7.084192018795283 %)
[2026-01-09 17:55:39] 2026-01-09 22:55:04,305 | INFO     | left removable region: 20
[2026-01-09 17:55:39] 2026-01-09 22:55:04,306 | INFO     | sum of square deviations: 13180909374.80236
[2026-01-09 17:55:39] 2026-01-09 22:55:04,308 | INFO     | sum of deviations: -20580569934.378227
[2026-01-09 17:55:39] 2026-01-09 22:55:04,308 | INFO     | mean x: 1767987982.4641833
[2026-01-09 17:55:39] 2026-01-09 22:55:04,308 | INFO     | mean y: 2536023.40974212
[2026-01-09 17:55:39] 2026-01-09 22:55:04,309 | INFO     | intersect: 2763058782.62111
[2026-01-09 17:55:39] 2026-01-09 22:55:04,309 | INFO     | chi2: 0.03831390259755712
[2026-01-09 17:55:39] 2026-01-09 22:55:04,309 | INFO     | current memory leak: -1.56 B/s (using 349 data points, chi2=0.04)
[2026-01-09 17:55:39] 2026-01-09 22:55:04,310 | INFO     | could have reported an average CPU frequency of 2894 MHz (16 samples)
[2026-01-09 17:55:39] 2026-01-09 22:55:04,310 | INFO     | ..............................
[2026-01-09 17:55:39] 2026-01-09 22:55:04,310 | INFO     | . Timing measurements:
[2026-01-09 17:55:39] 2026-01-09 22:55:04,310 | INFO     | . get job = 0 s
[2026-01-09 17:55:39] 2026-01-09 22:55:04,310 | INFO     | . initial setup = 3 s
[2026-01-09 17:55:39] 2026-01-09 22:55:04,310 | INFO     | . payload setup = 19 s
[2026-01-09 17:55:39] 2026-01-09 22:55:04,311 | INFO     | . stage-in = 0 s
[2026-01-09 17:55:39] 2026-01-09 22:55:04,311 | INFO     | . payload execution = 23161 s
[2026-01-09 17:55:39] 2026-01-09 22:55:04,311 | INFO     | . stage-out = 2 s
[2026-01-09 17:55:39] 2026-01-09 22:55:04,311 | INFO     | . log creation = 0 s
[2026-01-09 17:55:39] 2026-01-09 22:55:04,311 | INFO     | ..............................
[2026-01-09 17:55:39] 2026-01-09 22:55:04,403 | INFO     | 
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | job summary report
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | --------------------------------------------------
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | PanDA job id: 6963146355
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | task id: 47898826
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | errors: (none)
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | pilot state: finished 
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | transexitcode: 0
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | exeerrorcode: 0
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | exeerrordiag: 
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | exitcode: 0
[2026-01-09 17:55:39] 2026-01-09 22:55:04,404 | INFO     | exitmsg: OK
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | cpuconsumptiontime: 57762 s
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | nevents: 400
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | neventsw: 0
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | pid: 3089287
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | pgrp: 3089287
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | corecount: 8
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | event service: False
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | sizes: {0: 2283741, 1: 2283996, 2: 2283996, 12: 2284024, 14: 2284314, 23: 2284342, 23184: 2319317, 23185: 2319316, 23188: 2328370, 23191: 2328426, 23205: 2328620}
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | --------------------------------------------------
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | 
[2026-01-09 17:55:39] 2026-01-09 22:55:04,405 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 17:55:39] 2026-01-09 22:55:04,431 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,431 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,433 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:55:39] 2026-01-09 22:55:04,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,433 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:55:39] 2026-01-09 22:55:04,433 | INFO     | job 6963146355 has completed (purged errors)
[2026-01-09 17:55:39] 2026-01-09 22:55:04,433 | INFO     | overall cleanup function is called
[2026-01-09 17:55:39] 2026-01-09 22:55:05,460 | INFO     | --- collectZombieJob: --- 10, [3089287]
[2026-01-09 17:55:39] 2026-01-09 22:55:05,461 | INFO     | zombie collector waiting for pid 3089287
[2026-01-09 17:55:39] 2026-01-09 22:55:05,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:55:39] 2026-01-09 22:55:05,462 | INFO     | collected zombie processes
[2026-01-09 17:55:39] 2026-01-09 22:55:05,462 | INFO     | will attempt to kill all subprocesses of pid=3089287
[2026-01-09 17:55:39] 2026-01-09 22:55:05,837 | INFO     | PID=3069533 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:55:39] 2026-01-09 22:55:05,837 | INFO     | .. there are 14 such processes running
[2026-01-09 17:55:39] 2026-01-09 22:55:06,354 | INFO     | process IDs to be killed: [3089287] (in reverse order)
[2026-01-09 17:55:39] 2026-01-09 22:55:06,469 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:55:39] 2026-01-09 22:55:06,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:55:39] 2026-01-09 22:55:06,482 | INFO     | did not find any defunct processes belonging to 3089287
[2026-01-09 17:55:39] 2026-01-09 22:55:06,495 | INFO     | did not find any defunct processes belonging to 3089287
[2026-01-09 17:55:39] 2026-01-09 22:55:06,495 | INFO     | ready for new job
[2026-01-09 17:55:39] 2026-01-09 22:55:06,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:55:39] 2026-01-09 22:55:06,499 | INFO     | ***************************************
[2026-01-09 17:55:39] 2026-01-09 22:55:06,499 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:55:39] 2026-01-09 22:55:06,499 | INFO     | ***************************************
[2026-01-09 17:55:39] 2026-01-09 22:55:06,499 | INFO     | 
[2026-01-09 17:55:39] 2026-01-09 22:55:06,502 | INFO     | architecture information:
[2026-01-09 17:55:39] 2026-01-09 22:55:06,503 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:55:39] 2026-01-09 22:55:06,528 | INFO     | cat /etc/os-release:
[2026-01-09 17:55:39] NAME="CentOS Linux"
[2026-01-09 17:55:39] VERSION="7 (Core)"
[2026-01-09 17:55:39] ID="centos"
[2026-01-09 17:55:39] ID_LIKE="rhel fedora"
[2026-01-09 17:55:39] VERSION_ID="7"
[2026-01-09 17:55:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:55:39] ANSI_COLOR="0;31"
[2026-01-09 17:55:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:55:39] HOME_URL="https://www.centos.org/"
[2026-01-09 17:55:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:55:39] 
[2026-01-09 17:55:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:55:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:55:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:55:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:55:39] 
[2026-01-09 17:55:39] 2026-01-09 22:55:06,529 | INFO     | ***************************************
[2026-01-09 17:55:39] 2026-01-09 22:55:07,032 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 17:55:39] 2026-01-09 22:55:07,083 | INFO     | sufficient remaining disk space (74178363392 B)
[2026-01-09 17:55:39] 2026-01-09 22:55:07,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:55:39] 2026-01-09 22:55:07,084 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:55:39] 2026-01-09 22:55:07,084 | INFO     | update_server=False
[2026-01-09 17:55:39] 2026-01-09 22:55:07,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:55:39] 2026-01-09 22:55:07,396 | INFO     | all payload control threads have been joined
[2026-01-09 17:55:39] 2026-01-09 22:55:07,553 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 17:55:39] 2026-01-09 22:55:07,553 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 17:55:39] 2026-01-09 22:55:07,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:55:39] 2026-01-09 22:55:07,553 | INFO     | will abort loop
[2026-01-09 17:55:39] 2026-01-09 22:55:07,851 | INFO     | all job control threads have been joined
[2026-01-09 17:55:39] 2026-01-09 22:55:08,090 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:08,107 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:08,181 | INFO     | all data control threads have been joined
[2026-01-09 17:55:39] 2026-01-09 22:55:08,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:55:39] 2026-01-09 22:55:08,402 | INFO     | [payload] control thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:08,405 | INFO     | [job] validate thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:08,559 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:08,687 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:08,798 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:08,857 | INFO     | [job] control thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:09,094 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:09,167 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:09,186 | INFO     | [data] control thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:09,305 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:09,349 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:09,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:55:39] 2026-01-09 22:55:10,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:55:39] 2026-01-09 22:55:10,377 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:10,424 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:14,216 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:55:39] 2026-01-09 22:55:20,434 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:55:39] 2026-01-09 22:55:20,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552174200640)>', '<ExcThread(monitor, started 140551814878976)>']
[2026-01-09 17:55:39] 2026-01-09 22:55:25,864 | INFO     | all workflow threads have been joined
[2026-01-09 17:55:39] 2026-01-09 22:55:25,864 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:55:39] 2026-01-09 22:55:25,865 | INFO     | traces error code: 0
[2026-01-09 17:55:39] 2026-01-09 22:55:25,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:55:39] 2026-01-09 22:55:38,233 | INFO     | PID=3069533 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:55:39] 2026-01-09 22:55:38,234 | INFO     | .. there are 14 such processes running
[2026-01-09 17:55:39] 2026-01-09 22:55:38,235 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:55:39] 2026-01-09 22:55:38,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:55:39] 2026-01-09 22:55:38,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:55:39] 2026-01-09 22:55:38,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:55:39] 2026-01-09 22:55:38,235 | INFO     | [monitor] control thread has ended
[2026-01-09 17:55:39] 2026-01-09 22:55:38,679 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:55:39] 2026-01-09 22:55:38,682 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:55:39] 2026-01-09 22:55:38,685 [wrapper] pilotpid: 3069533
[2026-01-09 17:55:39] 2026-01-09 22:55:38,687 [wrapper] Pilot exit status: 0
[2026-01-09 17:55:39] 2026-01-09 22:55:38,721 [wrapper] pandaids: 6963146355 6963146355 6963146355
[2026-01-09 17:55:39] 2026-01-09 22:55:38,792 [wrapper] cleanup supervisor_pilot 4092505 3069534
[2026-01-09 17:55:39] 2026-01-09 22:55:38,796 [wrapper] Test setup, not cleaning
[2026-01-09 17:55:39] 2026-01-09 22:55:38,799 [wrapper] apfmon messages muted
[2026-01-09 17:55:39] 2026-01-09 22:55:38,801 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:55:39] 2026-01-09 22:55:38,805 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:55:39]  *** Error codes and diagnostics ***
[2026-01-09 17:55:39]     "exeErrorCode": 0,
[2026-01-09 17:55:39]     "exeErrorDiag": "",
[2026-01-09 17:55:39]     "pilotErrorCode": 0,
[2026-01-09 17:55:39]     "pilotErrorDiag": "",
[2026-01-09 17:55:39]  *** Listing of results directory ***
[2026-01-09 17:55:39] total 674240
[2026-01-09 17:55:39] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:02 queuedata.json
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 17:55:39] -rwx------. 1 boincer umatlas     36322 Jan  8 10:02 runpilot2-wrapper.sh
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:55:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:01 run_atlas
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:01 job.xml
[2026-01-09 17:55:39] -rw-r--r--. 3 boincer umatlas 224776655 Jan  9 00:01 EVNT.47898824._001054.pool.root.1
[2026-01-09 17:55:39] -rw-r--r--. 3 boincer umatlas 224776655 Jan  9 00:01 ATLAS.root_0
[2026-01-09 17:55:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 17:55:39] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:01 shared
[2026-01-09 17:55:39] -rw-r--r--. 2 boincer umatlas    592388 Jan  9 00:01 input.tar.gz
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:01 boinc_lockfile
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 11:27 pandaJob.out
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas        57 Jan  9 11:27 setup.sh.local
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas    989356 Jan  9 11:27 agis_schedconf.cvmfs.json
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas      6843 Jan  9 17:45 init_data.xml
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas 229795570 Jan  9 17:53 HITS.47898826._026735.pool.root.1
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas       532 Jan  9 17:53 boinc_task_state.xml
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas      1058 Jan  9 17:54 memory_monitor_summary.json
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas   1516240 Jan  9 17:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas    581057 Jan  9 17:54 log.47898826._026735.job.log.tgz.1
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas      7851 Jan  9 17:55 heartbeat.json
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas        29 Jan  9 17:55 wrapper_checkpoint.txt
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 17:55 boinc_mmap_file
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas        96 Jan  9 17:55 pilot_heartbeat.json
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas       823 Jan  9 17:55 pilotlog.txt
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas   2995730 Jan  9 17:55 log.47898826._026735.job.log.1
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas       357 Jan  9 17:55 output.list
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas       620 Jan  9 17:55 runtime_log
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas   3594240 Jan  9 17:55 result.tar.gz
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas      9438 Jan  9 17:55 runtime_log.err
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas       913 Jan  9 17:55 bgJKDm6h6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTekKDmbHconn.diag
[2026-01-09 17:55:39] -rw-r--r--. 1 boincer umatlas     25647 Jan  9 17:55 stderr.txt
[2026-01-09 17:55:39] HITS file was successfully produced:
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas 229795570 Jan  9 17:53 shared/HITS.pool.root.1
[2026-01-09 17:55:39]  *** Contents of shared directory: ***
[2026-01-09 17:55:39] total 448036
[2026-01-09 17:55:39] -rw-r--r--. 3 boincer umatlas 224776655 Jan  9 00:01 ATLAS.root_0
[2026-01-09 17:55:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:01 start_atlas.sh
[2026-01-09 17:55:39] -rw-r--r--. 2 boincer umatlas    592388 Jan  9 00:01 input.tar.gz
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas 229795570 Jan  9 17:53 HITS.pool.root.1
[2026-01-09 17:55:39] -rw-------. 1 boincer umatlas   3594240 Jan  9 17:55 result.tar.gz
17:55:40 (3057122): run_atlas exited; CPU time 58378.390306
17:55:40 (3057122): called boinc_finish(0)

</stderr_txt>
]]>

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