Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:49:45 (27054): wrapper (7.7.26015): starting
07:49:45 (27054): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:49:45] Arguments: --nthreads 8
[2026-01-09 07:49:45] Threads: 8
[2026-01-09 07:49:45] Checking for CVMFS
[2026-01-09 07:49:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:49:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:49:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:49:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:49:45] 2.11.2.0 7147 35075 97348 154934 3 57 13260871 25165824 0 130560 0 14575741 99.800 10199541 3658 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 07:49:45] CVMFS is ok
[2026-01-09 07:49:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:49:45] Checking for apptainer binary...
[2026-01-09 07:49:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:49:45] Running /usr/bin/apptainer --version
[2026-01-09 07:49:46] apptainer version 1.3.2-1.el7
[2026-01-09 07:49:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:49:47] cg-vwn412.simple-grid.lan
[2026-01-09 07:49:47] apptainer works
[2026-01-09 07:49:47] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:49:47] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:49:47] Starting ATLAS job with PandaID=6963145979
[2026-01-09 07:49:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:38:27]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:38:27] 2026-01-09 09:37:41,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:38:27] 2026-01-09 09:37:42,398 | INFO     | time since job start (10058s) is within the limit (349056.0s)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,193 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 10:38:27] 2026-01-09 09:37:44,194 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 10:38:27] 2026-01-09 09:37:44,196 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963145979/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,197 | INFO     | extracted standard info from prmon json
[2026-01-09 10:38:27] 2026-01-09 09:37:44,197 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:38:27] 2026-01-09 09:37:44,197 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:38:27] 2026-01-09 09:37:44,198 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:38:27] 2026-01-09 09:37:44,198 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:38:27] 2026-01-09 09:37:44,202 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:38:27] 2026-01-09 09:37:44,203 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,204 | INFO     | sum of deviations: 10982614033.000004
[2026-01-09 10:38:27] 2026-01-09 09:37:44,204 | INFO     | mean x: 1767946441.0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,204 | INFO     | mean y: 2472794.109090909
[2026-01-09 10:38:27] 2026-01-09 09:37:44,204 | INFO     | intersect: -13937454901.355387
[2026-01-09 10:38:27] 2026-01-09 09:37:44,205 | INFO     | chi2: 2.2654922453200523
[2026-01-09 10:38:27] 2026-01-09 09:37:44,205 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,206 | INFO     | sum of deviations: 21274611289.5
[2026-01-09 10:38:27] 2026-01-09 09:37:44,206 | INFO     | mean x: 1767946288.5
[2026-01-09 10:38:27] 2026-01-09 09:37:44,206 | INFO     | mean y: 2485240.28125
[2026-01-09 10:38:27] 2026-01-09 09:37:44,207 | INFO     | intersect: -29612348137.175003
[2026-01-09 10:38:27] 2026-01-09 09:37:44,207 | INFO     | chi2: 1.503570585519054
[2026-01-09 10:38:27] 2026-01-09 09:37:44,207 | INFO     | current chi2=1.503570585519054 (change=33.63161632422006 %)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,207 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,208 | INFO     | sum of deviations: 20486864640.0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,209 | INFO     | mean x: 1767946136.0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,209 | INFO     | mean y: 2484198.8967741937
[2026-01-09 10:38:27] 2026-01-09 09:37:44,209 | INFO     | intersect: -31365678790.027184
[2026-01-09 10:38:27] 2026-01-09 09:37:44,209 | INFO     | chi2: 1.5051454081047198
[2026-01-09 10:38:27] 2026-01-09 09:37:44,209 | INFO     | current chi2=1.5051454081047198 (change=-0.10473885302312681 %)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,209 | INFO     | right removable region: 154
[2026-01-09 10:38:27] 2026-01-09 09:37:44,210 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,211 | INFO     | sum of deviations: -13004119537.5
[2026-01-09 10:38:27] 2026-01-09 09:37:44,211 | INFO     | mean x: 1767946593.5
[2026-01-09 10:38:27] 2026-01-09 09:37:44,211 | INFO     | mean y: 2502131.58125
[2026-01-09 10:38:27] 2026-01-09 09:37:44,211 | INFO     | intersect: 18104590791.23829
[2026-01-09 10:38:27] 2026-01-09 09:37:44,212 | INFO     | chi2: 0.8496135589683256
[2026-01-09 10:38:27] 2026-01-09 09:37:44,212 | INFO     | current chi2=0.8496135589683256 (change=62.49761786987277 %)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,212 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,213 | INFO     | sum of deviations: -12272507527.999998
[2026-01-09 10:38:27] 2026-01-09 09:37:44,213 | INFO     | mean x: 1767946746.0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,214 | INFO     | mean y: 2501094.8193548387
[2026-01-09 10:38:27] 2026-01-09 09:37:44,214 | INFO     | intersect: 18793377884.013206
[2026-01-09 10:38:27] 2026-01-09 09:37:44,214 | INFO     | chi2: 0.8350921312997648
[2026-01-09 10:38:27] 2026-01-09 09:37:44,214 | INFO     | current chi2=0.8350921312997648 (change=1.7091803108926333 %)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,214 | INFO     | left removable region: 20
[2026-01-09 10:38:27] 2026-01-09 09:37:44,215 | INFO     | sum of square deviations: 746051197.5
[2026-01-09 10:38:27] 2026-01-09 09:37:44,215 | INFO     | sum of deviations: 2406251994.0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,216 | INFO     | mean x: 1767946715.5
[2026-01-09 10:38:27] 2026-01-09 09:37:44,216 | INFO     | mean y: 2508152.2537313434
[2026-01-09 10:38:27] 2026-01-09 09:37:44,216 | INFO     | intersect: -5699681353.926406
[2026-01-09 10:38:27] 2026-01-09 09:37:44,216 | INFO     | chi2: 0.0003763499411447156
[2026-01-09 10:38:27] 2026-01-09 09:37:44,217 | INFO     | current memory leak: 3.23 B/s (using 134 data points, chi2=0.00)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,217 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,217 | INFO     | ..............................
[2026-01-09 10:38:27] 2026-01-09 09:37:44,218 | INFO     | . Timing measurements:
[2026-01-09 10:38:27] 2026-01-09 09:37:44,218 | INFO     | . get job = 0 s
[2026-01-09 10:38:27] 2026-01-09 09:37:44,218 | INFO     | . initial setup = 1 s
[2026-01-09 10:38:27] 2026-01-09 09:37:44,218 | INFO     | . payload setup = 8 s
[2026-01-09 10:38:27] 2026-01-09 09:37:44,218 | INFO     | . stage-in = 0 s
[2026-01-09 10:38:27] 2026-01-09 09:37:44,218 | INFO     | . payload execution = 10018 s
[2026-01-09 10:38:27] 2026-01-09 09:37:44,218 | INFO     | . stage-out = 1 s
[2026-01-09 10:38:27] 2026-01-09 09:37:44,218 | INFO     | . log creation = 0 s
[2026-01-09 10:38:27] 2026-01-09 09:37:44,218 | INFO     | ..............................
[2026-01-09 10:38:27] 2026-01-09 09:37:44,337 | INFO     | 
[2026-01-09 10:38:27] 2026-01-09 09:37:44,337 | INFO     | job summary report
[2026-01-09 10:38:27] 2026-01-09 09:37:44,337 | INFO     | --------------------------------------------------
[2026-01-09 10:38:27] 2026-01-09 09:37:44,337 | INFO     | PanDA job id: 6963145979
[2026-01-09 10:38:27] 2026-01-09 09:37:44,337 | INFO     | task id: 47898826
[2026-01-09 10:38:27] 2026-01-09 09:37:44,337 | INFO     | errors: (none)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,337 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:38:27] 2026-01-09 09:37:44,338 | INFO     | pilot state: finished 
[2026-01-09 10:38:27] 2026-01-09 09:37:44,338 | INFO     | transexitcode: 0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,338 | INFO     | exeerrorcode: 0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,338 | INFO     | exeerrordiag: 
[2026-01-09 10:38:27] 2026-01-09 09:37:44,338 | INFO     | exitcode: 0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,338 | INFO     | exitmsg: OK
[2026-01-09 10:38:27] 2026-01-09 09:37:44,338 | INFO     | cpuconsumptiontime: 74691 s
[2026-01-09 10:38:27] 2026-01-09 09:37:44,338 | INFO     | nevents: 400
[2026-01-09 10:38:27] 2026-01-09 09:37:44,339 | INFO     | neventsw: 0
[2026-01-09 10:38:27] 2026-01-09 09:37:44,339 | INFO     | pid: 4827
[2026-01-09 10:38:27] 2026-01-09 09:37:44,339 | INFO     | pgrp: 4827
[2026-01-09 10:38:27] 2026-01-09 09:37:44,339 | INFO     | corecount: 8
[2026-01-09 10:38:27] 2026-01-09 09:37:44,339 | INFO     | event service: False
[2026-01-09 10:38:27] 2026-01-09 09:37:44,339 | INFO     | sizes: {0: 2283968, 1: 2283996, 6: 2284258, 11: 2284286, 10030: 2312656, 10031: 2312655, 10033: 2321837, 10036: 2321893, 10043: 2322151}
[2026-01-09 10:38:27] 2026-01-09 09:37:44,339 | INFO     | --------------------------------------------------
[2026-01-09 10:38:27] 2026-01-09 09:37:44,339 | INFO     | 
[2026-01-09 10:38:27] 2026-01-09 09:37:44,339 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 10:38:27] 2026-01-09 09:37:44,376 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,376 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,376 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,376 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,378 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,378 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:38:27] 2026-01-09 09:37:44,378 | INFO     | job 6963145979 has completed (purged errors)
[2026-01-09 10:38:27] 2026-01-09 09:37:44,379 | INFO     | overall cleanup function is called
[2026-01-09 10:38:27] 2026-01-09 09:37:45,387 | INFO     | --- collectZombieJob: --- 10, [4827]
[2026-01-09 10:38:27] 2026-01-09 09:37:45,387 | INFO     | zombie collector waiting for pid 4827
[2026-01-09 10:38:27] 2026-01-09 09:37:45,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:38:27] 2026-01-09 09:37:45,388 | INFO     | collected zombie processes
[2026-01-09 10:38:27] 2026-01-09 09:37:45,388 | INFO     | will attempt to kill all subprocesses of pid=4827
[2026-01-09 10:38:27] 2026-01-09 09:37:45,454 | INFO     | process IDs to be killed: [4827] (in reverse order)
[2026-01-09 10:38:27] 2026-01-09 09:37:45,522 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:38:27] 2026-01-09 09:37:45,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:38:27] 2026-01-09 09:37:45,525 | INFO     | did not find any defunct processes belonging to 4827
[2026-01-09 10:38:27] 2026-01-09 09:37:45,526 | INFO     | did not find any defunct processes belonging to 4827
[2026-01-09 10:38:27] 2026-01-09 09:37:45,526 | INFO     | ready for new job
[2026-01-09 10:38:27] 2026-01-09 09:37:45,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:38:27] 2026-01-09 09:37:45,528 | INFO     | ***************************************
[2026-01-09 10:38:27] 2026-01-09 09:37:45,529 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:38:27] 2026-01-09 09:37:45,529 | INFO     | ***************************************
[2026-01-09 10:38:27] 2026-01-09 09:37:45,529 | INFO     | 
[2026-01-09 10:38:27] 2026-01-09 09:37:45,529 | INFO     | pilot is running in a VM
[2026-01-09 10:38:27] 2026-01-09 09:37:45,530 | INFO     | architecture information:
[2026-01-09 10:38:27] 2026-01-09 09:37:45,530 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:38:27] 2026-01-09 09:37:45,550 | INFO     | cat /etc/os-release:
[2026-01-09 10:38:27] NAME="CentOS Linux"
[2026-01-09 10:38:27] VERSION="7 (Core)"
[2026-01-09 10:38:27] ID="centos"
[2026-01-09 10:38:27] ID_LIKE="rhel fedora"
[2026-01-09 10:38:27] VERSION_ID="7"
[2026-01-09 10:38:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:38:27] ANSI_COLOR="0;31"
[2026-01-09 10:38:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:38:27] HOME_URL="https://www.centos.org/"
[2026-01-09 10:38:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:38:27] 
[2026-01-09 10:38:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:38:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:38:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:38:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:38:27] 
[2026-01-09 10:38:27] 2026-01-09 09:37:45,550 | INFO     | ***************************************
[2026-01-09 10:38:27] 2026-01-09 09:37:46,054 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 10:38:27] 2026-01-09 09:37:46,074 | INFO     | sufficient remaining disk space (498099814400 B)
[2026-01-09 10:38:27] 2026-01-09 09:37:46,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:38:27] 2026-01-09 09:37:46,075 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:38:27] 2026-01-09 09:37:46,075 | INFO     | update_server=False
[2026-01-09 10:38:27] 2026-01-09 09:37:46,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:38:27] 2026-01-09 09:37:46,075 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:38:27] 2026-01-09 09:37:46,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:38:27] 2026-01-09 09:37:46,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:38:27] 2026-01-09 09:37:46,076 | INFO     | aborting loop
[2026-01-09 10:38:27] 2026-01-09 09:37:46,124 | INFO     | all payload control threads have been joined
[2026-01-09 10:38:27] 2026-01-09 09:37:46,898 | INFO     | all data control threads have been joined
[2026-01-09 10:38:27] 2026-01-09 09:37:47,080 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:47,081 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:47,082 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:47,129 | INFO     | [payload] control thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:47,155 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:47,287 | INFO     | [job] validate thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:47,438 | INFO     | all job control threads have been joined
[2026-01-09 10:38:27] 2026-01-09 09:37:47,564 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:47,758 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:47,904 | INFO     | [data] control thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:47,951 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:48,059 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:48,082 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:48,243 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:48,300 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:48,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:38:27] 2026-01-09 09:37:48,443 | INFO     | [job] control thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:37:52,418 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:38:27] 2026-01-09 09:38:15,492 | INFO     | PID=30792 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 10:38:27] 2026-01-09 09:38:15,493 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:38:27] 2026-01-09 09:38:15,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:38:27] 2026-01-09 09:38:15,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:38:27] 2026-01-09 09:38:20,239 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:38:27] 2026-01-09 09:38:21,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664361801536)>', '<ExcThread(monitor, started 139663469700864)>']
[2026-01-09 10:38:27] 2026-01-09 09:38:22,530 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:38:27] 2026-01-09 09:38:22,530 | INFO     | [monitor] control thread has ended
[2026-01-09 10:38:27] 2026-01-09 09:38:26,903 | INFO     | all workflow threads have been joined
[2026-01-09 10:38:27] 2026-01-09 09:38:26,903 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:38:27] 2026-01-09 09:38:26,904 | INFO     | traces error code: 0
[2026-01-09 10:38:27] 2026-01-09 09:38:26,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:38:27] 2026-01-09 09:38:27,057 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:38:27] 2026-01-09 09:38:27,064 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:38:27] 2026-01-09 09:38:27,068 [wrapper] pilotpid: 30792
[2026-01-09 10:38:27] 2026-01-09 09:38:27,074 [wrapper] Pilot exit status: 0
[2026-01-09 10:38:27] 2026-01-09 09:38:27,091 [wrapper] pandaids: 6963145979
[2026-01-09 10:38:27] 2026-01-09 09:38:27,170 [wrapper] cleanup supervisor_pilot 23728 30793
[2026-01-09 10:38:27] 2026-01-09 09:38:27,177 [wrapper] Test setup, not cleaning
[2026-01-09 10:38:27] 2026-01-09 09:38:27,182 [wrapper] apfmon messages muted
[2026-01-09 10:38:27] 2026-01-09 09:38:27,186 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:38:27] 2026-01-09 09:38:27,189 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:38:27]  *** Error codes and diagnostics ***
[2026-01-09 10:38:27]     "exeErrorCode": 0,
[2026-01-09 10:38:27]     "exeErrorDiag": "",
[2026-01-09 10:38:27]     "pilotErrorCode": 0,
[2026-01-09 10:38:27]     "pilotErrorDiag": "",
[2026-01-09 10:38:27]  *** Listing of results directory ***
[2026-01-09 10:38:27] total 446340
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc      5112 Jan  8 16:02 queuedata.json
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 10:38:27] -rwx------. 1 boinc boinc     36322 Jan  8 16:03 runpilot2-wrapper.sh
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc       100 Jan  9 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:38:27] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 07:49 run_atlas
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc       105 Jan  9 07:49 job.xml
[2026-01-09 10:38:27] -rw-r--r--. 2 boinc boinc 227910827 Jan  9 07:49 EVNT.47898824._001025.pool.root.1
[2026-01-09 10:38:27] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:49 start_atlas.sh
[2026-01-09 10:38:27] drwxrwx--x. 2 boinc boinc        68 Jan  9 07:49 shared
[2026-01-09 10:38:27] -rw-r--r--. 2 boinc boinc    592396 Jan  9 07:49 input.tar.gz
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc      6390 Jan  9 07:49 init_data.xml
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc         0 Jan  9 07:49 boinc_lockfile
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc      2518 Jan  9 07:49 pandaJob.out
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc    989771 Jan  9 07:50 agis_schedconf.cvmfs.json
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc   1516240 Jan  9 07:50 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:38:27] drwx------. 5 boinc boinc      4096 Jan  9 07:50 pilot3
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc 221737675 Jan  9 10:36 HITS.47898826._026409.pool.root.1
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc       530 Jan  9 10:37 boinc_task_state.xml
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc      1016 Jan  9 10:37 memory_monitor_summary.json
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc    399029 Jan  9 10:37 log.47898826._026409.job.log.tgz.1
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc      7764 Jan  9 10:37 heartbeat.json
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc        95 Jan  9 10:38 pilot_heartbeat.json
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc      8192 Jan  9 10:38 boinc_mmap_file
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc        28 Jan  9 10:38 wrapper_checkpoint.txt
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc      4809 Jan  9 10:38 pilotlog.txt
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc   1351298 Jan  9 10:38 log.47898826._026409.job.log.1
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc       357 Jan  9 10:38 output.list
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc       620 Jan  9 10:38 runtime_log
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc   1771520 Jan  9 10:38 result.tar.gz
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc      8817 Jan  9 10:38 runtime_log.err
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc       655 Jan  9 10:38 KUfKDm3i6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtRfKDmDd2N4n.diag
[2026-01-09 10:38:27] -rw-r--r--. 1 boinc boinc     20763 Jan  9 10:38 stderr.txt
[2026-01-09 10:38:27] HITS file was successfully produced:
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc 221737675 Jan  9 10:36 shared/HITS.pool.root.1
[2026-01-09 10:38:27]  *** Contents of shared directory: ***
[2026-01-09 10:38:27] total 441444
[2026-01-09 10:38:27] -rw-r--r--. 2 boinc boinc 227910827 Jan  9 07:49 ATLAS.root_0
[2026-01-09 10:38:27] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:49 start_atlas.sh
[2026-01-09 10:38:27] -rw-r--r--. 2 boinc boinc    592396 Jan  9 07:49 input.tar.gz
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc 221737675 Jan  9 10:36 HITS.pool.root.1
[2026-01-09 10:38:27] -rw-------. 1 boinc boinc   1771520 Jan  9 10:38 result.tar.gz
10:38:28 (27054): run_atlas exited; CPU time 74758.497563
10:38:28 (27054): called boinc_finish(0)

</stderr_txt>
]]>

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