Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:50 (1016807): wrapper (7.7.26015): starting
00:04:50 (1016807): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:04:50] Arguments: --nthreads 12
[2026-01-09 00:04:50] Threads: 12
[2026-01-09 00:04:50] Checking for CVMFS
[2026-01-09 00:04:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:04:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:04:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:04:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:04:52] 2.13.3.0 9601 32235 252316 154931 0 371 24906473 32935937 12348 16776704 0 25380724 99.748 35440038 44025 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:04:52] CVMFS is ok
[2026-01-09 00:04:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:04:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:04:52] Further information can be found at the LHC@home message board.
[2026-01-09 00:04:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:04:52] Checking for apptainer binary...
[2026-01-09 00:04:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:04:52] Running /usr/bin/apptainer --version
[2026-01-09 00:04:53] apptainer version 1.4.5-2.el9
[2026-01-09 00:04:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:04:54] c6-5-7-2.aglt2.org
[2026-01-09 00:04:54] apptainer works
[2026-01-09 00:04:54] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:04:54] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:04:54] Starting ATLAS job with PandaID=6963145080
[2026-01-09 00:04:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:19:40]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:19:40] 2026-01-09 13:19:01,782 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963145080/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:19:40] 2026-01-09 13:19:01,791 | INFO     | extracted standard info from prmon json
[2026-01-09 08:19:40] 2026-01-09 13:19:01,791 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:19:40] 2026-01-09 13:19:01,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:19:40] 2026-01-09 13:19:01,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:19:40] 2026-01-09 13:19:01,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:19:40] 2026-01-09 13:19:01,829 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:19:40] 2026-01-09 13:19:01,842 | INFO     | sum of square deviations: 34506373667.48023
[2026-01-09 08:19:40] 2026-01-09 13:19:01,861 | INFO     | monitor loop #1950: job 0:6963145080 is in state 'finished'
[2026-01-09 08:19:40] 2026-01-09 13:19:01,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:19:40] 2026-01-09 13:19:01,863 | INFO     | sum of deviations: 204678783670.64676
[2026-01-09 08:19:40] 2026-01-09 13:19:01,863 | INFO     | mean x: 1767950010.4241164
[2026-01-09 08:19:40] 2026-01-09 13:19:01,863 | INFO     | mean y: 2674640.168399168
[2026-01-09 08:19:40] 2026-01-09 13:19:01,863 | INFO     | intersect: -10484137483.620316
[2026-01-09 08:19:40] 2026-01-09 13:19:01,864 | INFO     | chi2: 8.16773201142914
[2026-01-09 08:19:40] 2026-01-09 13:19:01,864 | INFO     | sum of square deviations: 33441408765.277092
[2026-01-09 08:19:40] 2026-01-09 13:19:01,880 | INFO     | sum of deviations: 267084246059.1006
[2026-01-09 08:19:40] 2026-01-09 13:19:01,880 | INFO     | mean x: 1767949857.9243698
[2026-01-09 08:19:40] 2026-01-09 13:19:01,880 | INFO     | mean y: 2683517.086134454
[2026-01-09 08:19:40] 2026-01-09 13:19:01,880 | INFO     | intersect: -14117282486.388893
[2026-01-09 08:19:40] 2026-01-09 13:19:01,901 | INFO     | chi2: 6.806780036955501
[2026-01-09 08:19:40] 2026-01-09 13:19:01,901 | INFO     | current chi2=6.806780036955501 (change=16.66254441954331 %)
[2026-01-09 08:19:40] 2026-01-09 13:19:01,901 | INFO     | right removable region: 475
[2026-01-09 08:19:40] 2026-01-09 13:19:01,902 | INFO     | sum of square deviations: 33441371738.426487
[2026-01-09 08:19:40] 2026-01-09 13:19:01,938 | INFO     | sum of deviations: 46012852464.83817
[2026-01-09 08:19:40] 2026-01-09 13:19:01,938 | INFO     | mean x: 1767950162.9264705
[2026-01-09 08:19:40] 2026-01-09 13:19:01,938 | INFO     | mean y: 2697343.62394958
[2026-01-09 08:19:40] 2026-01-09 13:19:01,938 | INFO     | intersect: -2429871231.8584743
[2026-01-09 08:19:40] 2026-01-09 13:19:01,939 | INFO     | chi2: 4.5990905381830895
[2026-01-09 08:19:40] 2026-01-09 13:19:01,939 | INFO     | current chi2=4.5990905381830895 (change=43.691951061230164 %)
[2026-01-09 08:19:40] 2026-01-09 13:19:01,957 | INFO     | sum of square deviations: 32398596866.92151
[2026-01-09 08:19:40] 2026-01-09 13:19:01,962 | INFO     | sum of deviations: -80225193086.4076
[2026-01-09 08:19:40] 2026-01-09 13:19:01,962 | INFO     | mean x: 1767950315.4225054
[2026-01-09 08:19:40] 2026-01-09 13:19:01,962 | INFO     | mean y: 2715790.0573248407
[2026-01-09 08:19:40] 2026-01-09 13:19:01,962 | INFO     | intersect: 4380502766.590136
[2026-01-09 08:19:40] 2026-01-09 13:19:01,963 | INFO     | chi2: 2.3988873292536934
[2026-01-09 08:19:40] 2026-01-09 13:19:01,963 | INFO     | current chi2=2.3988873292536934 (change=47.83996293751167 %)
[2026-01-09 08:19:40] 2026-01-09 13:19:01,963 | INFO     | sum of square deviations: 31377815937.3928
[2026-01-09 08:19:40] 2026-01-09 13:19:01,988 | INFO     | sum of deviations: -142045463551.29608
[2026-01-09 08:19:40] 2026-01-09 13:19:01,988 | INFO     | mean x: 1767950467.912017
[2026-01-09 08:19:40] 2026-01-09 13:19:01,988 | INFO     | mean y: 2725011.017167382
[2026-01-09 08:19:40] 2026-01-09 13:19:01,988 | INFO     | intersect: 8006129207.515865
[2026-01-09 08:19:40] 2026-01-09 13:19:01,989 | INFO     | chi2: 1.819040441883049
[2026-01-09 08:19:40] 2026-01-09 13:19:01,989 | INFO     | current chi2=1.819040441883049 (change=24.171493187678717 %)
[2026-01-09 08:19:40] 2026-01-09 13:19:01,989 | INFO     | left removable region: 30
[2026-01-09 08:19:40] 2026-01-09 13:19:01,994 | INFO     | sum of square deviations: 27324019168.99785
[2026-01-09 08:19:40] 2026-01-09 13:19:01,997 | INFO     | sum of deviations: -90087587476.80676
[2026-01-09 08:19:40] 2026-01-09 13:19:01,998 | INFO     | mean x: 1767950742.4022472
[2026-01-09 08:19:40] 2026-01-09 13:19:01,998 | INFO     | mean y: 2736562.406741573
[2026-01-09 08:19:40] 2026-01-09 13:19:01,998 | INFO     | intersect: 5831689330.144438
[2026-01-09 08:19:40] 2026-01-09 13:19:01,998 | INFO     | chi2: 0.22770100797441542
[2026-01-09 08:19:40] 2026-01-09 13:19:01,999 | INFO     | current memory leak: -3.30 B/s (using 445 data points, chi2=0.23)
[2026-01-09 08:19:40] 2026-01-09 13:19:01,999 | INFO     | could have reported an average CPU frequency of 2972 MHz (20 samples)
[2026-01-09 08:19:40] 2026-01-09 13:19:02,006 | INFO     | ..............................
[2026-01-09 08:19:40] 2026-01-09 13:19:02,007 | INFO     | . Timing measurements:
[2026-01-09 08:19:40] 2026-01-09 13:19:02,007 | INFO     | . get job = 0 s
[2026-01-09 08:19:40] 2026-01-09 13:19:02,007 | INFO     | . initial setup = 4 s
[2026-01-09 08:19:40] 2026-01-09 13:19:02,007 | INFO     | . payload setup = 56 s
[2026-01-09 08:19:40] 2026-01-09 13:19:02,007 | INFO     | . stage-in = 0 s
[2026-01-09 08:19:40] 2026-01-09 13:19:02,007 | INFO     | . payload execution = 29347 s
[2026-01-09 08:19:40] 2026-01-09 13:19:02,007 | INFO     | . stage-out = 7 s
[2026-01-09 08:19:40] 2026-01-09 13:19:02,007 | INFO     | . log creation = 1 s
[2026-01-09 08:19:40] 2026-01-09 13:19:02,007 | INFO     | ..............................
[2026-01-09 08:19:40] 2026-01-09 13:19:02,740 | INFO     | 
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | job summary report
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | --------------------------------------------------
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | PanDA job id: 6963145080
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | task id: 47898826
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | errors: (none)
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | pilot state: finished 
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | transexitcode: 0
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | exeerrorcode: 0
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | exeerrordiag: 
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | exitcode: 0
[2026-01-09 08:19:40] 2026-01-09 13:19:02,741 | INFO     | exitmsg: OK
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | cpuconsumptiontime: 57772 s
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | nevents: 400
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | neventsw: 0
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | pid: 1032343
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | pgrp: 1032343
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | corecount: 12
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | event service: False
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | sizes: {0: 2283798, 1: 2283798, 2: 2283997, 3: 2284053, 14: 2284053, 25: 2284081, 37: 2284237, 42: 2284527, 49: 2284583, 29408: 2322509, 29409: 2322508, 29420: 233
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | --------------------------------------------------
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | 
[2026-01-09 08:19:40] 2026-01-09 13:19:02,742 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 08:19:40] 2026-01-09 13:19:02,765 | INFO     | PID=1024107 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:19:40] 2026-01-09 13:19:02,766 | INFO     | .. there are 10 such processes running
[2026-01-09 08:19:40] 2026-01-09 13:19:02,825 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,825 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,825 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,825 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,825 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | job 6963145080 has completed (purged errors)
[2026-01-09 08:19:40] 2026-01-09 13:19:02,826 | INFO     | overall cleanup function is called
[2026-01-09 08:19:40] 2026-01-09 13:19:03,849 | INFO     | --- collectZombieJob: --- 10, [1032343]
[2026-01-09 08:19:40] 2026-01-09 13:19:03,850 | INFO     | zombie collector waiting for pid 1032343
[2026-01-09 08:19:40] 2026-01-09 13:19:03,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:19:40] 2026-01-09 13:19:03,850 | INFO     | collected zombie processes
[2026-01-09 08:19:40] 2026-01-09 13:19:03,850 | INFO     | will attempt to kill all subprocesses of pid=1032343
[2026-01-09 08:19:40] 2026-01-09 13:19:05,521 | INFO     | process IDs to be killed: [1032343] (in reverse order)
[2026-01-09 08:19:40] 2026-01-09 13:19:06,247 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:19:40] 2026-01-09 13:19:06,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:19:40] 2026-01-09 13:19:06,291 | INFO     | did not find any defunct processes belonging to 1032343
[2026-01-09 08:19:40] 2026-01-09 13:19:06,353 | INFO     | did not find any defunct processes belonging to 1032343
[2026-01-09 08:19:40] 2026-01-09 13:19:06,354 | INFO     | ready for new job
[2026-01-09 08:19:40] 2026-01-09 13:19:06,354 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:19:40] 2026-01-09 13:19:06,374 | INFO     | ***************************************
[2026-01-09 08:19:40] 2026-01-09 13:19:06,375 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:19:40] 2026-01-09 13:19:06,375 | INFO     | ***************************************
[2026-01-09 08:19:40] 2026-01-09 13:19:06,375 | INFO     | 
[2026-01-09 08:19:40] 2026-01-09 13:19:06,395 | INFO     | architecture information:
[2026-01-09 08:19:40] 2026-01-09 13:19:06,414 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:19:40] 2026-01-09 13:19:06,492 | INFO     | cat /etc/os-release:
[2026-01-09 08:19:40] NAME="CentOS Linux"
[2026-01-09 08:19:40] VERSION="7 (Core)"
[2026-01-09 08:19:40] ID="centos"
[2026-01-09 08:19:40] ID_LIKE="rhel fedora"
[2026-01-09 08:19:40] VERSION_ID="7"
[2026-01-09 08:19:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:19:40] ANSI_COLOR="0;31"
[2026-01-09 08:19:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:19:40] HOME_URL="https://www.centos.org/"
[2026-01-09 08:19:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:19:40] 
[2026-01-09 08:19:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:19:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:19:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:19:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:19:40] 
[2026-01-09 08:19:40] 2026-01-09 13:19:06,493 | INFO     | ***************************************
[2026-01-09 08:19:40] 2026-01-09 13:19:06,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 08:19:40] 2026-01-09 13:19:07,066 | INFO     | sufficient remaining disk space (75457626112 B)
[2026-01-09 08:19:40] 2026-01-09 13:19:07,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:19:40] 2026-01-09 13:19:07,066 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:19:40] 2026-01-09 13:19:07,067 | INFO     | update_server=False
[2026-01-09 08:19:40] 2026-01-09 13:19:07,067 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:19:40] 2026-01-09 13:19:07,209 | INFO     | all job control threads have been joined
[2026-01-09 08:19:40] 2026-01-09 13:19:07,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:19:40] 2026-01-09 13:19:07,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:19:40] 2026-01-09 13:19:07,980 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:19:40] 2026-01-09 13:19:07,981 | INFO     | aborting loop
[2026-01-09 08:19:40] 2026-01-09 13:19:08,073 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:08,105 | INFO     | all data control threads have been joined
[2026-01-09 08:19:40] 2026-01-09 13:19:08,215 | INFO     | [job] control thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:08,373 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:08,421 | INFO     | all payload control threads have been joined
[2026-01-09 08:19:40] 2026-01-09 13:19:08,708 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:08,799 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:08,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:19:40] 2026-01-09 13:19:08,993 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:09,022 | INFO     | [job] validate thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:09,028 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:09,111 | INFO     | [data] control thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:09,172 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:09,374 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:09,379 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:09,427 | INFO     | [payload] control thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:09,506 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:09,636 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:12,957 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:19:40] 2026-01-09 13:19:13,556 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:19:40] 2026-01-09 13:19:14,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503298402112)>', '<ExcThread(monitor, started 140502942873344)>']
[2026-01-09 08:19:40] 2026-01-09 13:19:19,566 | INFO     | all workflow threads have been joined
[2026-01-09 08:19:40] 2026-01-09 13:19:19,570 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:19:40] 2026-01-09 13:19:19,571 | INFO     | traces error code: 0
[2026-01-09 08:19:40] 2026-01-09 13:19:19,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:19:40] 2026-01-09 13:19:37,664 | INFO     | PID=1024107 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:19:40] 2026-01-09 13:19:37,664 | INFO     | .. there are 10 such processes running
[2026-01-09 08:19:40] 2026-01-09 13:19:37,664 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:19:40] 2026-01-09 13:19:37,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:19:40] 2026-01-09 13:19:37,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:19:40] 2026-01-09 13:19:37,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:19:40] 2026-01-09 13:19:37,665 | INFO     | [monitor] control thread has ended
[2026-01-09 08:19:40] 2026-01-09 13:19:39,079 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:19:40] 2026-01-09 13:19:39,115 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:19:40] 2026-01-09 13:19:39,138 [wrapper] pilotpid: 1024107
[2026-01-09 08:19:40] 2026-01-09 13:19:39,161 [wrapper] Pilot exit status: 0
[2026-01-09 08:19:40] 2026-01-09 13:19:39,346 [wrapper] pandaids: 6963145080
[2026-01-09 08:19:40] 2026-01-09 13:19:39,483 [wrapper] cleanup supervisor_pilot 2063667 1024108
[2026-01-09 08:19:40] 2026-01-09 13:19:39,489 [wrapper] Test setup, not cleaning
[2026-01-09 08:19:40] 2026-01-09 13:19:39,499 [wrapper] apfmon messages muted
[2026-01-09 08:19:40] 2026-01-09 13:19:39,520 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:19:40] 2026-01-09 13:19:39,554 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:19:40]  *** Error codes and diagnostics ***
[2026-01-09 08:19:40]     "exeErrorCode": 0,
[2026-01-09 08:19:40]     "exeErrorDiag": "",
[2026-01-09 08:19:40]     "pilotErrorCode": 0,
[2026-01-09 08:19:40]     "pilotErrorDiag": "",
[2026-01-09 08:19:40]  *** Listing of results directory ***
[2026-01-09 08:19:40] total 453136
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 08:19:40] -rwx------. 1 boincer umatlas     36322 Jan  8 10:05 runpilot2-wrapper.sh
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:07 queuedata.json
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:19:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:04 run_atlas
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:04 job.xml
[2026-01-09 08:19:40] -rw-r--r--. 2 boincer umatlas 227217798 Jan  9 00:04 EVNT.47898824._000345.pool.root.1
[2026-01-09 08:19:40] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:04 start_atlas.sh
[2026-01-09 08:19:40] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:04 shared
[2026-01-09 08:19:40] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:04 input.tar.gz
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:04 boinc_lockfile
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:04 pandaJob.out
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas        57 Jan  9 00:04 setup.sh.local
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas    989771 Jan  9 00:06 agis_schedconf.cvmfs.json
[2026-01-09 08:19:40] drwx------. 5 boincer umatlas      4096 Jan  9 00:06 pilot3
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas      6838 Jan  9 08:12 init_data.xml
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas 223680173 Jan  9 08:15 HITS.47898826._026060.pool.root.1
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas       531 Jan  9 08:15 boinc_task_state.xml
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas      1038 Jan  9 08:17 memory_monitor_summary.json
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas   1516240 Jan  9 08:18 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas    727030 Jan  9 08:18 log.47898826._026060.job.log.tgz.1
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas        95 Jan  9 08:18 pilot_heartbeat.json
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas      7819 Jan  9 08:19 heartbeat.json
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 08:19 boinc_mmap_file
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas        28 Jan  9 08:19 wrapper_checkpoint.txt
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas       823 Jan  9 08:19 pilotlog.txt
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas   3872636 Jan  9 08:19 log.47898826._026060.job.log.1
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas       357 Jan  9 08:19 output.list
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas       620 Jan  9 08:19 runtime_log
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas   4618240 Jan  9 08:19 result.tar.gz
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas       658 Jan  9 08:19 TSOMDmBl6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOXfKDmUaKVyn.diag
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas      9345 Jan  9 08:19 runtime_log.err
[2026-01-09 08:19:40] -rw-r--r--. 1 boincer umatlas     21329 Jan  9 08:19 stderr.txt
[2026-01-09 08:19:40] HITS file was successfully produced:
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas 223680173 Jan  9 08:15 shared/HITS.pool.root.1
[2026-01-09 08:19:40]  *** Contents of shared directory: ***
[2026-01-09 08:19:40] total 445448
[2026-01-09 08:19:40] -rw-r--r--. 2 boincer umatlas 227217798 Jan  9 00:04 ATLAS.root_0
[2026-01-09 08:19:40] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:04 start_atlas.sh
[2026-01-09 08:19:40] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 00:04 input.tar.gz
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas 223680173 Jan  9 08:15 HITS.pool.root.1
[2026-01-09 08:19:40] -rw-------. 1 boincer umatlas   4618240 Jan  9 08:19 result.tar.gz
08:19:42 (1016807): run_atlas exited; CPU time 58474.547580
08:19:42 (1016807): called boinc_finish(0)

</stderr_txt>
]]>

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