Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:01:12 (3325459): wrapper (7.7.26015): starting
13:01:12 (3325459): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 13:01:12] Arguments: --nthreads 3
[2026-01-09 13:01:12] Threads: 3
[2026-01-09 13:01:12] Checking for CVMFS
[2026-01-09 13:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:01:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:01:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:01:12] 2.9.2.0 2849566 1907 82408 154942 0 57 21271327 36864001 0 130560 0 1236021 99.989 74228 4697 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 13:01:12] CVMFS is ok
[2026-01-09 13:01:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:01:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:01:12] Further information can be found at the LHC@home message board.
[2026-01-09 13:01:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:01:12] Checking for apptainer binary...
[2026-01-09 13:01:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:01:12] Running /usr/bin/apptainer --version
[2026-01-09 13:01:12] apptainer version 1.4.1-1.1
[2026-01-09 13:01:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:01:12] atlasA303a
[2026-01-09 13:01:12] apptainer works
[2026-01-09 13:01:12] Set ATHENA_PROC_NUMBER=3
[2026-01-09 13:01:12] Set ATHENA_CORE_NUMBER=3
[2026-01-09 13:01:12] Starting ATLAS job with PandaID=6963146447
[2026-01-09 13:01:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:50:32]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:50:32] 2026-01-09 13:50:10,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:50:32] 2026-01-09 13:50:10,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:50:32] 2026-01-09 13:50:10,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:50:32] 2026-01-09 13:50:10,839 | INFO     | aborting loop
[2026-01-09 14:50:32] 2026-01-09 13:50:10,960 | INFO     | all data control threads have been joined
[2026-01-09 14:50:32] 2026-01-09 13:50:11,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:50:32] 2026-01-09 13:50:11,787 | INFO     | all payload control threads have been joined
[2026-01-09 14:50:32] 2026-01-09 13:50:11,844 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:11,844 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:11,844 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:11,901 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:11,966 | INFO     | [data] control thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:12,179 | INFO     | all job control threads have been joined
[2026-01-09 14:50:32] 2026-01-09 13:50:12,430 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:12,782 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:12,793 | INFO     | [payload] control thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:12,840 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:13,083 | INFO     | [job] validate thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:13,114 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:13,114 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:13,185 | INFO     | [job] control thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:13,221 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:15,412 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:21,586 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:50:32] 2026-01-09 13:50:22,592 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:50:32] 2026-01-09 13:50:25,704 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:50:32] 2026-01-09 13:50:27,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015888312128)>', '<ExcThread(monitor, started 140014725887744)>']
[2026-01-09 14:50:32] 2026-01-09 13:50:27,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:50:32] 2026-01-09 13:50:27,931 | INFO     | [monitor] control thread has ended
[2026-01-09 14:50:32] 2026-01-09 13:50:32,256 | INFO     | all workflow threads have been joined
[2026-01-09 14:50:32] 2026-01-09 13:50:32,256 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:50:32] 2026-01-09 13:50:32,256 | INFO     | traces error code: 0
[2026-01-09 14:50:32] 2026-01-09 13:50:32,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:50:32] 2026-01-09 13:50:32,307 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:50:32] 2026-01-09 13:50:32,310 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:50:32] 2026-01-09 13:50:32,312 [wrapper] pilotpid: 3329194
[2026-01-09 14:50:32] 2026-01-09 13:50:32,315 [wrapper] Pilot exit status: 0
[2026-01-09 14:50:32] 2026-01-09 13:50:32,323 [wrapper] pandaids: 6963146447
[2026-01-09 14:50:32] 2026-01-09 13:50:32,339 [wrapper] cleanup supervisor_pilot 3350257 3329195
[2026-01-09 14:50:32] 2026-01-09 13:50:32,342 [wrapper] Test setup, not cleaning
[2026-01-09 14:50:32] 2026-01-09 13:50:32,344 [wrapper] apfmon messages muted
[2026-01-09 14:50:32] 2026-01-09 13:50:32,347 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:50:32] 2026-01-09 13:50:32,349 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:50:32]  *** Error codes and diagnostics ***
[2026-01-09 14:50:32]     "exeErrorCode": 0,
[2026-01-09 14:50:32]     "exeErrorDiag": "",
[2026-01-09 14:50:32]     "pilotErrorCode": 0,
[2026-01-09 14:50:32]     "pilotErrorDiag": "",
[2026-01-09 14:50:32]  *** Listing of results directory ***
[2026-01-09 14:50:32] total 431428
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 14:50:32] -rwx------ 1 boinc boinc     36322 Jan  8 16:03 runpilot2-wrapper.sh
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc      5112 Jan  8 16:04 queuedata.json
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc       100 Jan  9 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:50:32] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 13:01 run_atlas
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc       105 Jan  9 13:01 job.xml
[2026-01-09 14:50:32] -rw-r--r-- 2 boinc boinc 223491059 Jan  9 13:01 EVNT.47898824._001058.pool.root.1
[2026-01-09 14:50:32] drwxrwx--x 2 boinc boinc      4096 Jan  9 13:01 shared
[2026-01-09 14:50:32] -rw-r--r-- 2 boinc boinc    592399 Jan  9 13:01 input.tar.gz
[2026-01-09 14:50:32] -rw-r--r-- 2 boinc boinc     15847 Jan  9 13:01 start_atlas.sh
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc         0 Jan  9 13:01 boinc_setup_complete
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc      6450 Jan  9 13:01 init_data.xml
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc         0 Jan  9 13:01 boinc_lockfile
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc      2518 Jan  9 13:01 pandaJob.out
[2026-01-09 14:50:32] -rw------- 1 boinc boinc    989377 Jan  9 13:01 agis_schedconf.cvmfs.json
[2026-01-09 14:50:32] -rw------- 1 boinc boinc   1516240 Jan  9 13:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:50:32] drwx------ 5 boinc boinc      4096 Jan  9 13:01 pilot3
[2026-01-09 14:50:32] -rw------- 1 boinc boinc 211954861 Jan  9 14:49 HITS.47898826._026827.pool.root.1
[2026-01-09 14:50:32] -rw------- 1 boinc boinc        95 Jan  9 14:49 pilot_heartbeat.json
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc       529 Jan  9 14:49 boinc_task_state.xml
[2026-01-09 14:50:32] -rw------- 1 boinc boinc      1017 Jan  9 14:49 memory_monitor_summary.json
[2026-01-09 14:50:32] -rw------- 1 boinc boinc    271570 Jan  9 14:50 log.47898826._026827.job.log.tgz.1
[2026-01-09 14:50:32] -rw------- 1 boinc boinc      7759 Jan  9 14:50 heartbeat.json
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc      8192 Jan  9 14:50 boinc_mmap_file
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc        27 Jan  9 14:50 wrapper_checkpoint.txt
[2026-01-09 14:50:32] -rw------- 1 boinc boinc      4628 Jan  9 14:50 pilotlog.txt
[2026-01-09 14:50:32] -rw------- 1 boinc boinc    945389 Jan  9 14:50 log.47898826._026827.job.log.1
[2026-01-09 14:50:32] -rw------- 1 boinc boinc       357 Jan  9 14:50 output.list
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc       620 Jan  9 14:50 runtime_log
[2026-01-09 14:50:32] -rw------- 1 boinc boinc   1239040 Jan  9 14:50 result.tar.gz
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc      8917 Jan  9 14:50 runtime_log.err
[2026-01-09 14:50:32] -rw------- 1 boinc boinc       663 Jan  9 14:50 8KCMDmFj6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoTfKDmLjEwOm.diag
[2026-01-09 14:50:32] -rw-r--r-- 1 boinc boinc      6722 Jan  9 14:50 stderr.txt
[2026-01-09 14:50:32] HITS file was successfully produced:
[2026-01-09 14:50:32] -rw------- 1 boinc boinc 211954861 Jan  9 14:49 shared/HITS.pool.root.1
[2026-01-09 14:50:32]  *** Contents of shared directory: ***
[2026-01-09 14:50:32] total 427060
[2026-01-09 14:50:32] -rw-r--r-- 2 boinc boinc 223491059 Jan  9 13:01 ATLAS.root_0
[2026-01-09 14:50:32] -rw-r--r-- 2 boinc boinc    592399 Jan  9 13:01 input.tar.gz
[2026-01-09 14:50:32] -rw-r--r-- 2 boinc boinc     15847 Jan  9 13:01 start_atlas.sh
[2026-01-09 14:50:32] -rw------- 1 boinc boinc 211954861 Jan  9 14:49 HITS.pool.root.1
[2026-01-09 14:50:32] -rw------- 1 boinc boinc   1239040 Jan  9 14:50 result.tar.gz
14:50:33 (3325459): run_atlas exited; CPU time 18928.563025
14:50:33 (3325459): called boinc_finish(0)

</stderr_txt>
]]>

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