Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:08 (2745833): wrapper (7.7.26015): starting
00:00:08 (2745833): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:00:08] Arguments: --nthreads 12
[2026-01-09 00:00:08] Threads: 12
[2026-01-09 00:00:08] Checking for CVMFS
[2026-01-09 00:00:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:00:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:00:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:00:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:00:11] 2.13.3.0 6428 21066 151524 154931 3 134 22555201 39288832 8752 16776704 0 9014233 99.648 9398213 37367 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:00:11] CVMFS is ok
[2026-01-09 00:00:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:00:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:00:11] Further information can be found at the LHC@home message board.
[2026-01-09 00:00:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:00:11] Checking for apptainer binary...
[2026-01-09 00:00:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:00:11] Running /usr/bin/apptainer --version
[2026-01-09 00:00:11] apptainer version 1.4.5-2.el9
[2026-01-09 00:00:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:00:12] c-211-3.aglt2.org
[2026-01-09 00:00:12] apptainer works
[2026-01-09 00:00:12] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:00:12] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:00:12] Starting ATLAS job with PandaID=6963145069
[2026-01-09 00:00:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:29:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:29:46] 2026-01-09 13:29:01,642 | INFO     | time since job start (30438s) is within the limit (349056.0s)
[2026-01-09 08:29:46] 2026-01-09 13:29:02,279 | INFO     | monitor loop #1832: job 0:6963145069 is in state 'finished'
[2026-01-09 08:29:46] 2026-01-09 13:29:02,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:29:46] 2026-01-09 13:29:04,004 | INFO     | PID=2752488 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:29:46] 2026-01-09 13:29:04,004 | INFO     | .. there are 6 such processes running
[2026-01-09 08:29:46] 2026-01-09 13:29:04,789 | INFO     | monitor loop #1833: job 0:6963145069 is in state 'finished'
[2026-01-09 08:29:46] 2026-01-09 13:29:04,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:29:46] 2026-01-09 13:29:05,005 | INFO     | time since job start (30442s) is within the limit (349056.0s)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,014 | INFO     | time since job start (30444s) is within the limit (349056.0s)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,064 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 08:29:46] 2026-01-09 13:29:07,075 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0773
[2026-01-09 08:29:46] 2026-01-09 13:29:07,092 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963145069/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,093 | INFO     | extracted standard info from prmon json
[2026-01-09 08:29:46] 2026-01-09 13:29:07,093 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:29:46] 2026-01-09 13:29:07,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:29:46] 2026-01-09 13:29:07,093 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:29:46] 2026-01-09 13:29:07,093 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:29:46] 2026-01-09 13:29:07,120 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:29:46] 2026-01-09 13:29:07,121 | INFO     | sum of square deviations: 37838256882.27223
[2026-01-09 08:29:46] 2026-01-09 13:29:07,142 | INFO     | sum of deviations: 451670512875.35516
[2026-01-09 08:29:46] 2026-01-09 13:29:07,142 | INFO     | mean x: 1767950179.5866935
[2026-01-09 08:29:46] 2026-01-09 13:29:07,142 | INFO     | mean y: 2650441.3870967743
[2026-01-09 08:29:46] 2026-01-09 13:29:07,142 | INFO     | intersect: -21101148468.708084
[2026-01-09 08:29:46] 2026-01-09 13:29:07,143 | INFO     | chi2: 5.810397466126889
[2026-01-09 08:29:46] 2026-01-09 13:29:07,144 | INFO     | sum of square deviations: 36705607230.50093
[2026-01-09 08:29:46] 2026-01-09 13:29:07,165 | INFO     | sum of deviations: 479308309706.72876
[2026-01-09 08:29:46] 2026-01-09 13:29:07,165 | INFO     | mean x: 1767950027.095723
[2026-01-09 08:29:46] 2026-01-09 13:29:07,165 | INFO     | mean y: 2654124.5376782077
[2026-01-09 08:29:46] 2026-01-09 13:29:07,165 | INFO     | intersect: -23083549948.09419
[2026-01-09 08:29:46] 2026-01-09 13:29:07,166 | INFO     | chi2: 5.113520792045954
[2026-01-09 08:29:46] 2026-01-09 13:29:07,166 | INFO     | current chi2=5.113520792045954 (change=11.993614518516935 %)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,166 | INFO     | right removable region: 490
[2026-01-09 08:29:46] 2026-01-09 13:29:07,167 | INFO     | sum of square deviations: 36705368721.69035
[2026-01-09 08:29:46] 2026-01-09 13:29:07,183 | INFO     | sum of deviations: 295839493103.20593
[2026-01-09 08:29:46] 2026-01-09 13:29:07,183 | INFO     | mean x: 1767950332.0936863
[2026-01-09 08:29:46] 2026-01-09 13:29:07,184 | INFO     | mean y: 2671398.582484725
[2026-01-09 08:29:46] 2026-01-09 13:29:07,184 | INFO     | intersect: -14246729936.791275
[2026-01-09 08:29:46] 2026-01-09 13:29:07,184 | INFO     | chi2: 2.6361943000795773
[2026-01-09 08:29:46] 2026-01-09 13:29:07,185 | INFO     | current chi2=2.6361943000795773 (change=54.62970794256492 %)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,185 | INFO     | sum of square deviations: 35595318076.55963
[2026-01-09 08:29:46] 2026-01-09 13:29:07,202 | INFO     | sum of deviations: 226390494395.2509
[2026-01-09 08:29:46] 2026-01-09 13:29:07,202 | INFO     | mean x: 1767950484.6008232
[2026-01-09 08:29:46] 2026-01-09 13:29:07,202 | INFO     | mean y: 2680936.3724279837
[2026-01-09 08:29:46] 2026-01-09 13:29:07,203 | INFO     | intersect: -11241696299.258347
[2026-01-09 08:29:46] 2026-01-09 13:29:07,214 | INFO     | chi2: 2.0557690276838145
[2026-01-09 08:29:46] 2026-01-09 13:29:07,214 | INFO     | current chi2=2.0557690276838145 (change=22.01754523095061 %)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,214 | INFO     | left removable region: 20
[2026-01-09 08:29:46] 2026-01-09 13:29:07,215 | INFO     | sum of square deviations: 32194351881.063763
[2026-01-09 08:29:46] 2026-01-09 13:29:07,234 | INFO     | sum of deviations: 141656459397.0427
[2026-01-09 08:29:46] 2026-01-09 13:29:07,234 | INFO     | mean x: 1767950606.6170213
[2026-01-09 08:29:46] 2026-01-09 13:29:07,234 | INFO     | mean y: 2701304.244680851
[2026-01-09 08:29:46] 2026-01-09 13:29:07,235 | INFO     | intersect: -7776353364.954207
[2026-01-09 08:29:46] 2026-01-09 13:29:07,258 | INFO     | chi2: 0.6001062971511857
[2026-01-09 08:29:46] 2026-01-09 13:29:07,259 | INFO     | current memory leak: 4.40 B/s (using 470 data points, chi2=0.60)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,260 | INFO     | could have reported an average CPU frequency of 2600 MHz (20 samples)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,260 | INFO     | ..............................
[2026-01-09 08:29:46] 2026-01-09 13:29:07,260 | INFO     | . Timing measurements:
[2026-01-09 08:29:46] 2026-01-09 13:29:07,260 | INFO     | . get job = 0 s
[2026-01-09 08:29:46] 2026-01-09 13:29:07,260 | INFO     | . initial setup = 10 s
[2026-01-09 08:29:46] 2026-01-09 13:29:07,260 | INFO     | . payload setup = 53 s
[2026-01-09 08:29:46] 2026-01-09 13:29:07,260 | INFO     | . stage-in = 0 s
[2026-01-09 08:29:46] 2026-01-09 13:29:07,260 | INFO     | . payload execution = 30250 s
[2026-01-09 08:29:46] 2026-01-09 13:29:07,260 | INFO     | . stage-out = 4 s
[2026-01-09 08:29:46] 2026-01-09 13:29:07,261 | INFO     | . log creation = 1 s
[2026-01-09 08:29:46] 2026-01-09 13:29:07,261 | INFO     | ..............................
[2026-01-09 08:29:46] 2026-01-09 13:29:07,522 | INFO     | 
[2026-01-09 08:29:46] 2026-01-09 13:29:07,522 | INFO     | job summary report
[2026-01-09 08:29:46] 2026-01-09 13:29:07,522 | INFO     | --------------------------------------------------
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | PanDA job id: 6963145069
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | task id: 47898826
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | errors: (none)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | pilot state: finished 
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | transexitcode: 0
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | exeerrorcode: 0
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | exeerrordiag: 
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | exitcode: 0
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | exitmsg: OK
[2026-01-09 08:29:46] 2026-01-09 13:29:07,523 | INFO     | cpuconsumptiontime: 69390 s
[2026-01-09 08:29:46] 2026-01-09 13:29:07,524 | INFO     | nevents: 400
[2026-01-09 08:29:46] 2026-01-09 13:29:07,524 | INFO     | neventsw: 0
[2026-01-09 08:29:46] 2026-01-09 13:29:07,524 | INFO     | pid: 2761461
[2026-01-09 08:29:46] 2026-01-09 13:29:07,524 | INFO     | pgrp: 2761461
[2026-01-09 08:29:46] 2026-01-09 13:29:07,524 | INFO     | corecount: 12
[2026-01-09 08:29:46] 2026-01-09 13:29:07,524 | INFO     | event service: False
[2026-01-09 08:29:46] 2026-01-09 13:29:07,524 | INFO     | sizes: {0: 2283140, 2: 2283741, 3: 2283853, 4: 2284052, 15: 2284052, 26: 2284080, 37: 2284236, 44: 2284526, 48: 2284554, 30307: 2322481, 30313: 2331507, 30317: 233
[2026-01-09 08:29:46] 2026-01-09 13:29:07,524 | INFO     | --------------------------------------------------
[2026-01-09 08:29:46] 2026-01-09 13:29:07,524 | INFO     | 
[2026-01-09 08:29:46] 2026-01-09 13:29:07,524 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 08:29:46] 2026-01-09 13:29:07,799 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,800 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,800 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,800 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,800 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,801 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,801 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,801 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,801 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,801 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,801 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,801 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:29:46] 2026-01-09 13:29:07,802 | INFO     | job 6963145069 has completed (purged errors)
[2026-01-09 08:29:46] 2026-01-09 13:29:07,802 | INFO     | overall cleanup function is called
[2026-01-09 08:29:46] 2026-01-09 13:29:08,820 | INFO     | --- collectZombieJob: --- 10, [2761461]
[2026-01-09 08:29:46] 2026-01-09 13:29:08,820 | INFO     | zombie collector waiting for pid 2761461
[2026-01-09 08:29:46] 2026-01-09 13:29:08,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:29:46] 2026-01-09 13:29:08,820 | INFO     | collected zombie processes
[2026-01-09 08:29:46] 2026-01-09 13:29:08,820 | INFO     | will attempt to kill all subprocesses of pid=2761461
[2026-01-09 08:29:46] 2026-01-09 13:29:09,417 | INFO     | process IDs to be killed: [2761461] (in reverse order)
[2026-01-09 08:29:46] 2026-01-09 13:29:10,056 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:29:46] 2026-01-09 13:29:10,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:29:46] 2026-01-09 13:29:10,073 | INFO     | did not find any defunct processes belonging to 2761461
[2026-01-09 08:29:46] 2026-01-09 13:29:10,085 | INFO     | did not find any defunct processes belonging to 2761461
[2026-01-09 08:29:46] 2026-01-09 13:29:10,085 | INFO     | ready for new job
[2026-01-09 08:29:46] 2026-01-09 13:29:10,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:29:46] 2026-01-09 13:29:10,092 | INFO     | ***************************************
[2026-01-09 08:29:46] 2026-01-09 13:29:10,093 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:29:46] 2026-01-09 13:29:10,093 | INFO     | ***************************************
[2026-01-09 08:29:46] 2026-01-09 13:29:10,093 | INFO     | 
[2026-01-09 08:29:46] 2026-01-09 13:29:10,095 | INFO     | architecture information:
[2026-01-09 08:29:46] 2026-01-09 13:29:10,102 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:29:46] 2026-01-09 13:29:10,228 | INFO     | cat /etc/os-release:
[2026-01-09 08:29:46] NAME="CentOS Linux"
[2026-01-09 08:29:46] VERSION="7 (Core)"
[2026-01-09 08:29:46] ID="centos"
[2026-01-09 08:29:46] ID_LIKE="rhel fedora"
[2026-01-09 08:29:46] VERSION_ID="7"
[2026-01-09 08:29:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:29:46] ANSI_COLOR="0;31"
[2026-01-09 08:29:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:29:46] HOME_URL="https://www.centos.org/"
[2026-01-09 08:29:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:29:46] 
[2026-01-09 08:29:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:29:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:29:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:29:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:29:46] 
[2026-01-09 08:29:46] 2026-01-09 13:29:10,229 | INFO     | ***************************************
[2026-01-09 08:29:46] 2026-01-09 13:29:10,732 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 08:29:46] 2026-01-09 13:29:10,871 | INFO     | sufficient remaining disk space (53541339136 B)
[2026-01-09 08:29:46] 2026-01-09 13:29:10,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:29:46] 2026-01-09 13:29:10,871 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:29:46] 2026-01-09 13:29:10,871 | INFO     | update_server=False
[2026-01-09 08:29:46] 2026-01-09 13:29:10,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:29:46] 2026-01-09 13:29:10,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:29:46] 2026-01-09 13:29:10,872 | INFO     | aborting loop
[2026-01-09 08:29:46] 2026-01-09 13:29:10,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:29:46] 2026-01-09 13:29:10,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:29:46] 2026-01-09 13:29:11,144 | INFO     | all data control threads have been joined
[2026-01-09 08:29:46] 2026-01-09 13:29:11,877 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:11,878 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:11,966 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:11,978 | INFO     | [job] validate thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:12,107 | INFO     | all job control threads have been joined
[2026-01-09 08:29:46] 2026-01-09 13:29:12,138 | INFO     | all payload control threads have been joined
[2026-01-09 08:29:46] 2026-01-09 13:29:12,150 | INFO     | [data] control thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:12,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:29:46] 2026-01-09 13:29:12,698 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:12,896 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:12,899 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:13,075 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:13,078 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:13,078 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:13,113 | INFO     | [job] control thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:13,144 | INFO     | [payload] control thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:13,373 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:13,545 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:14,888 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:29:46] 2026-01-09 13:29:38,672 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:29:46] 2026-01-09 13:29:39,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139919629997888)>', '<ExcThread(monitor, started 139919271905024)>']
[2026-01-09 08:29:46] 2026-01-09 13:29:40,831 | INFO     | PID=2752488 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:29:46] 2026-01-09 13:29:40,831 | INFO     | .. there are 6 such processes running
[2026-01-09 08:29:46] 2026-01-09 13:29:40,831 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:29:46] 2026-01-09 13:29:40,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:29:46] 2026-01-09 13:29:40,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:29:46] 2026-01-09 13:29:40,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:29:46] 2026-01-09 13:29:40,832 | INFO     | [monitor] control thread has ended
[2026-01-09 08:29:46] 2026-01-09 13:29:44,026 | INFO     | all workflow threads have been joined
[2026-01-09 08:29:46] 2026-01-09 13:29:44,027 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:29:46] 2026-01-09 13:29:44,027 | INFO     | traces error code: 0
[2026-01-09 08:29:46] 2026-01-09 13:29:44,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:29:46] 2026-01-09 13:29:44,362 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:29:46] 2026-01-09 13:29:44,412 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:29:46] 2026-01-09 13:29:44,432 [wrapper] pilotpid: 2752488
[2026-01-09 08:29:46] 2026-01-09 13:29:44,455 [wrapper] Pilot exit status: 0
[2026-01-09 08:29:46] 2026-01-09 13:29:44,682 [wrapper] pandaids: 6963145069
[2026-01-09 08:29:46] 2026-01-09 13:29:45,109 [wrapper] cleanup supervisor_pilot 3519934 2752489
[2026-01-09 08:29:46] 2026-01-09 13:29:45,187 [wrapper] Test setup, not cleaning
[2026-01-09 08:29:46] 2026-01-09 13:29:45,242 [wrapper] apfmon messages muted
[2026-01-09 08:29:46] 2026-01-09 13:29:45,313 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:29:46] 2026-01-09 13:29:45,316 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:29:46]  *** Error codes and diagnostics ***
[2026-01-09 08:29:46]     "exeErrorCode": 0,
[2026-01-09 08:29:46]     "exeErrorDiag": "",
[2026-01-09 08:29:46]     "pilotErrorCode": 0,
[2026-01-09 08:29:46]     "pilotErrorDiag": "",
[2026-01-09 08:29:46]  *** Listing of results directory ***
[2026-01-09 08:29:46] total 455840
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:02 queuedata.json
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 08:29:46] -rwx------. 1 boincer umatlas     36322 Jan  8 10:02 runpilot2-wrapper.sh
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:29:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:00 run_atlas
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:00 job.xml
[2026-01-09 08:29:46] -rw-r--r--. 2 boincer umatlas 227217798 Jan  9 00:00 EVNT.47898824._000345.pool.root.1
[2026-01-09 08:29:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:00 start_atlas.sh
[2026-01-09 08:29:46] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:00 shared
[2026-01-09 08:29:46] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 00:00 input.tar.gz
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:00 boinc_lockfile
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 00:00 pandaJob.out
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas        57 Jan  9 00:00 setup.sh.local
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas    989771 Jan  9 00:01 agis_schedconf.cvmfs.json
[2026-01-09 08:29:46] drwx------. 5 boincer umatlas      4096 Jan  9 00:01 pilot3
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas      6657 Jan  9 08:27 init_data.xml
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas 226605432 Jan  9 08:27 HITS.47898826._026049.pool.root.1
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas       531 Jan  9 08:27 boinc_task_state.xml
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas      1040 Jan  9 08:28 memory_monitor_summary.json
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas   1516240 Jan  9 08:28 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas    721482 Jan  9 08:28 log.47898826._026049.job.log.tgz.1
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas        95 Jan  9 08:28 pilot_heartbeat.json
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas      7822 Jan  9 08:29 heartbeat.json
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 08:29 boinc_mmap_file
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas        28 Jan  9 08:29 wrapper_checkpoint.txt
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas      4823 Jan  9 08:29 pilotlog.txt
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas   3798185 Jan  9 08:29 log.47898826._026049.job.log.1
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas       357 Jan  9 08:29 output.list
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas       620 Jan  9 08:29 runtime_log
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas   4536320 Jan  9 08:29 result.tar.gz
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas      9340 Jan  9 08:29 runtime_log.err
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas       656 Jan  9 08:29 dBlLDmuh6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmockKDmtEFL3n.diag
[2026-01-09 08:29:46] -rw-r--r--. 1 boincer umatlas     21512 Jan  9 08:29 stderr.txt
[2026-01-09 08:29:46] HITS file was successfully produced:
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas 226605432 Jan  9 08:27 shared/HITS.pool.root.1
[2026-01-09 08:29:46]  *** Contents of shared directory: ***
[2026-01-09 08:29:46] total 448224
[2026-01-09 08:29:46] -rw-r--r--. 2 boincer umatlas 227217798 Jan  9 00:00 ATLAS.root_0
[2026-01-09 08:29:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:00 start_atlas.sh
[2026-01-09 08:29:46] -rw-r--r--. 2 boincer umatlas    592393 Jan  9 00:00 input.tar.gz
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas 226605432 Jan  9 08:27 HITS.pool.root.1
[2026-01-09 08:29:46] -rw-------. 1 boincer umatlas   4536320 Jan  9 08:29 result.tar.gz
08:29:47 (2745833): run_atlas exited; CPU time 70085.728059
08:29:47 (2745833): called boinc_finish(0)

</stderr_txt>
]]>

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