Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:05:00 (3288391): wrapper (7.7.26015): starting
11:05:00 (3288391): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 11:05:00] Arguments: --nthreads 3
[2026-01-09 11:05:00] Threads: 3
[2026-01-09 11:05:00] Checking for CVMFS
[2026-01-09 11:05:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:05:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:05:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:05:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:05:00] 2.9.2.0 2791136 2011 78424 154938 1 57 21349660 36864001 0 130560 0 1287982 99.989 74282 4524 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 11:05:00] CVMFS is ok
[2026-01-09 11:05:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:05:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:05:00] Further information can be found at the LHC@home message board.
[2026-01-09 11:05:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:05:00] Checking for apptainer binary...
[2026-01-09 11:05:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:05:00] Running /usr/bin/apptainer --version
[2026-01-09 11:05:00] apptainer version 1.4.1-1.1
[2026-01-09 11:05:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:05:00] thA337a
[2026-01-09 11:05:00] apptainer works
[2026-01-09 11:05:00] Set ATHENA_PROC_NUMBER=3
[2026-01-09 11:05:00] Set ATHENA_CORE_NUMBER=3
[2026-01-09 11:05:00] Starting ATLAS job with PandaID=6963156599
[2026-01-09 11:05:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:55:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:55:19] 2026-01-09 11:54:30,891 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:55:19] 2026-01-09 11:54:30,891 | INFO     | ***************************************
[2026-01-09 12:55:19] 2026-01-09 11:54:30,891 | INFO     | 
[2026-01-09 12:55:19] 2026-01-09 11:54:30,891 | INFO     | architecture information:
[2026-01-09 12:55:19] 2026-01-09 11:54:30,891 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:55:19] 2026-01-09 11:54:30,899 | INFO     | cat /etc/os-release:
[2026-01-09 12:55:19] NAME="CentOS Linux"
[2026-01-09 12:55:19] VERSION="7 (Core)"
[2026-01-09 12:55:19] ID="centos"
[2026-01-09 12:55:19] ID_LIKE="rhel fedora"
[2026-01-09 12:55:19] VERSION_ID="7"
[2026-01-09 12:55:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:55:19] ANSI_COLOR="0;31"
[2026-01-09 12:55:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:55:19] HOME_URL="https://www.centos.org/"
[2026-01-09 12:55:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:55:19] 
[2026-01-09 12:55:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:55:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:55:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:55:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:55:19] 
[2026-01-09 12:55:19] 2026-01-09 11:54:30,900 | INFO     | ***************************************
[2026-01-09 12:55:19] 2026-01-09 11:54:31,401 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 12:55:19] 2026-01-09 11:54:31,413 | INFO     | sufficient remaining disk space (384087097344 B)
[2026-01-09 12:55:19] 2026-01-09 11:54:31,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:55:19] 2026-01-09 11:54:31,413 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:55:19] 2026-01-09 11:54:31,413 | INFO     | update_server=False
[2026-01-09 12:55:19] 2026-01-09 11:54:31,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:55:19] 2026-01-09 11:54:31,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:55:19] 2026-01-09 11:54:31,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:55:19] 2026-01-09 11:54:31,664 | INFO     | all job control threads have been joined
[2026-01-09 12:55:19] 2026-01-09 11:54:31,720 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:55:19] 2026-01-09 11:54:31,720 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:55:19] 2026-01-09 11:54:31,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:55:19] 2026-01-09 11:54:31,720 | INFO     | will abort loop
[2026-01-09 12:55:19] 2026-01-09 11:54:31,994 | INFO     | all payload control threads have been joined
[2026-01-09 12:55:19] 2026-01-09 11:54:32,419 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:32,419 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:32,433 | INFO     | all data control threads have been joined
[2026-01-09 12:55:19] 2026-01-09 11:54:32,670 | INFO     | [job] control thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:32,726 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:32,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:55:19] 2026-01-09 11:54:33,000 | INFO     | [payload] control thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:33,228 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:33,282 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:33,299 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:33,439 | INFO     | [data] control thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:33,785 | INFO     | [job] validate thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:33,878 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:33,886 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:34,005 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:34,797 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:35,420 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:54:42,404 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:55:19] 2026-01-09 11:54:43,409 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:55:19] 2026-01-09 11:55:02,444 | INFO     | PID=3292116 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:55:19] 2026-01-09 11:55:02,445 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:55:19] 2026-01-09 11:55:02,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:55:19] 2026-01-09 11:55:02,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:55:19] 2026-01-09 11:55:13,162 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:55:19] 2026-01-09 11:55:14,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139946083972928)>', '<ExcThread(monitor, started 139945469540096)>']
[2026-01-09 12:55:19] 2026-01-09 11:55:14,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:55:19] 2026-01-09 11:55:14,510 | INFO     | [monitor] control thread has ended
[2026-01-09 12:55:19] 2026-01-09 11:55:19,043 | INFO     | all workflow threads have been joined
[2026-01-09 12:55:19] 2026-01-09 11:55:19,044 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:55:19] 2026-01-09 11:55:19,044 | INFO     | traces error code: 0
[2026-01-09 12:55:19] 2026-01-09 11:55:19,044 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:55:19] 2026-01-09 11:55:19,093 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:55:19] 2026-01-09 11:55:19,095 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:55:19] 2026-01-09 11:55:19,098 [wrapper] pilotpid: 3292116
[2026-01-09 12:55:19] 2026-01-09 11:55:19,100 [wrapper] Pilot exit status: 0
[2026-01-09 12:55:19] 2026-01-09 11:55:19,107 [wrapper] pandaids: 6963156599
[2026-01-09 12:55:19] 2026-01-09 11:55:19,124 [wrapper] cleanup supervisor_pilot 3317763 3292117
[2026-01-09 12:55:19] 2026-01-09 11:55:19,126 [wrapper] Test setup, not cleaning
[2026-01-09 12:55:19] 2026-01-09 11:55:19,128 [wrapper] apfmon messages muted
[2026-01-09 12:55:19] 2026-01-09 11:55:19,131 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:55:19] 2026-01-09 11:55:19,133 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:55:19]  *** Error codes and diagnostics ***
[2026-01-09 12:55:19]     "exeErrorCode": 0,
[2026-01-09 12:55:19]     "exeErrorDiag": "",
[2026-01-09 12:55:19]     "pilotErrorCode": 0,
[2026-01-09 12:55:19]     "pilotErrorDiag": "",
[2026-01-09 12:55:19]  *** Listing of results directory ***
[2026-01-09 12:55:19] total 442224
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 12:55:19] -rwx------ 1 boinc boinc     36322 Jan  8 20:10 runpilot2-wrapper.sh
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc       100 Jan  9 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:55:19] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 11:05 run_atlas
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc       105 Jan  9 11:05 job.xml
[2026-01-09 12:55:19] -rw-r--r-- 2 boinc boinc 226527104 Jan  9 11:05 EVNT.47898824._001206.pool.root.1
[2026-01-09 12:55:19] -rw-r--r-- 2 boinc boinc    592395 Jan  9 11:05 input.tar.gz
[2026-01-09 12:55:19] -rw-r--r-- 2 boinc boinc     15847 Jan  9 11:05 start_atlas.sh
[2026-01-09 12:55:19] drwxrwx--x 2 boinc boinc      4096 Jan  9 11:05 shared
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc         0 Jan  9 11:05 boinc_setup_complete
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc      6446 Jan  9 11:05 init_data.xml
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc         0 Jan  9 11:05 boinc_lockfile
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc      2519 Jan  9 11:05 pandaJob.out
[2026-01-09 12:55:19] -rw------- 1 boinc boinc    989751 Jan  9 11:05 agis_schedconf.cvmfs.json
[2026-01-09 12:55:19] -rw------- 1 boinc boinc   1516240 Jan  9 11:05 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:55:19] drwx------ 5 boinc boinc      4096 Jan  9 11:05 pilot3
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc       529 Jan  9 12:54 boinc_task_state.xml
[2026-01-09 12:55:19] -rw------- 1 boinc boinc 219924140 Jan  9 12:54 HITS.47898826._031769.pool.root.1
[2026-01-09 12:55:19] -rw------- 1 boinc boinc      1015 Jan  9 12:54 memory_monitor_summary.json
[2026-01-09 12:55:19] -rw------- 1 boinc boinc    288957 Jan  9 12:54 log.47898826._031769.job.log.tgz.1
[2026-01-09 12:55:19] -rw------- 1 boinc boinc      7741 Jan  9 12:54 heartbeat.json
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc        27 Jan  9 12:55 wrapper_checkpoint.txt
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc      8192 Jan  9 12:55 boinc_mmap_file
[2026-01-09 12:55:19] -rw------- 1 boinc boinc        95 Jan  9 12:55 pilot_heartbeat.json
[2026-01-09 12:55:19] -rw------- 1 boinc boinc      5010 Jan  9 12:55 pilotlog.txt
[2026-01-09 12:55:19] -rw------- 1 boinc boinc    950909 Jan  9 12:55 log.47898826._031769.job.log.1
[2026-01-09 12:55:19] -rw------- 1 boinc boinc       357 Jan  9 12:55 output.list
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc       620 Jan  9 12:55 runtime_log
[2026-01-09 12:55:19] -rw------- 1 boinc boinc   1259520 Jan  9 12:55 result.tar.gz
[2026-01-09 12:55:19] -rw------- 1 boinc boinc       660 Jan  9 12:55 VeNNDmyZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxAgKDm68L0Ko.diag
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc      8902 Jan  9 12:55 runtime_log.err
[2026-01-09 12:55:19] -rw-r--r-- 1 boinc boinc      9552 Jan  9 12:55 stderr.txt
[2026-01-09 12:55:19] HITS file was successfully produced:
[2026-01-09 12:55:19] -rw------- 1 boinc boinc 219924140 Jan  9 12:54 shared/HITS.pool.root.1
[2026-01-09 12:55:19]  *** Contents of shared directory: ***
[2026-01-09 12:55:19] total 437828
[2026-01-09 12:55:19] -rw-r--r-- 2 boinc boinc 226527104 Jan  9 11:05 ATLAS.root_0
[2026-01-09 12:55:19] -rw-r--r-- 2 boinc boinc    592395 Jan  9 11:05 input.tar.gz
[2026-01-09 12:55:19] -rw-r--r-- 2 boinc boinc     15847 Jan  9 11:05 start_atlas.sh
[2026-01-09 12:55:19] -rw------- 1 boinc boinc 219924140 Jan  9 12:54 HITS.pool.root.1
[2026-01-09 12:55:19] -rw------- 1 boinc boinc   1259520 Jan  9 12:55 result.tar.gz
12:55:20 (3288391): run_atlas exited; CPU time 18974.094936
12:55:20 (3288391): called boinc_finish(0)

</stderr_txt>
]]>

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