Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:02:29 (314290): wrapper (7.7.26015): starting
18:02:29 (314290): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 18:02:29] Arguments: --nthreads 12
[2026-01-08 18:02:29] Threads: 12
[2026-01-08 18:02:29] Checking for CVMFS
[2026-01-08 18:02:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 18:02:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 18:02:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 18:02:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 18:02:30] 2.11.5.0 527984 55931 334012 154926 3 544 28235264 45568000 14367 130560 0 409064633 99.828 209909635 18369 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 18:02:30] CVMFS is ok
[2026-01-08 18:02:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 18:02:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 18:02:30] Further information can be found at the LHC@home message board.
[2026-01-08 18:02:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 18:02:30] Checking for apptainer binary...
[2026-01-08 18:02:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 18:02:30] Running /usr/bin/apptainer --version
[2026-01-08 18:02:30] apptainer version 1.4.1-1.el9
[2026-01-08 18:02:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 18:02:31] wns0069.triumf.lcg
[2026-01-08 18:02:31] apptainer works
[2026-01-08 18:02:31] Set ATHENA_PROC_NUMBER=12
[2026-01-08 18:02:31] Set ATHENA_CORE_NUMBER=12
[2026-01-08 18:02:31] Starting ATLAS job with PandaID=6963156530
[2026-01-08 18:02:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 18:07:03]  *** The last 200 lines of the pilot log: ***
[2026-01-08 18:07:03] 2026-01-09 02:06:21,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | WARNING  | wrong length of table data, x=[1767924233.0], y=[1114.0] (must be same and length>=4)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | INFO     | could have reported an average CPU frequency of 2619 MHz (4 samples)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | INFO     | ..............................
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . Timing measurements:
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . get job = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . initial setup = 3 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . payload setup = 16 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . stage-in = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . payload execution = 32 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . stage-out = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . log creation = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | ..............................
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963156530/pilotlog.txt
[2026-01-08 18:07:03] 2026-01-09 02:06:21,824 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 18:07:03] - Log from pilotlog.txt -
[2026-01-08 18:07:03] 2026-01-09 02:06:21,806 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963156530/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,807 | INFO     | extracted standard info from prmon json
[2026-01-08 18:07:03] 2026-01-09 02:06:21,807 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:07:03] 2026-01-09 02:06:21,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | WARNING  | wrong length of table data, x=[1767924233.0], y=[1114.0] (must be same and length>=4)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | INFO     | could have reported an average CPU frequency of 2619 MHz (4 samples)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | INFO     | ..............................
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . Timing measurements:
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . get job = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . initial setup = 3 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . payload setup = 16 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . stage-in = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . payload execution = 32 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . stage-out = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . log creation = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | ..............................
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963156530/pilotlog.txt
[2026-01-08 18:07:03] 2026-01-09 02:06:21,824 | WARNING  | 
[2026-01-08 18:07:03] [begin log extracts]
[2026-01-08 18:07:03] - Log from pilotlog.txt -
[2026-01-08 18:07:03] 2026-01-09 02:06:21,806 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963156530/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,807 | INFO     | extracted standard info from prmon json
[2026-01-08 18:07:03] 2026-01-09 02:06:21,807 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:07:03] 2026-01-09 02:06:21,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | WARNING  | wrong length of table data, x=[1767924233.0], y=[1114.0] (must be same and length>=4)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | INFO     | could have reported an average CPU frequency of 2619 MHz (4 samples)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,808 | INFO     | ..............................
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . Timing measurements:
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . get job = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . initial setup = 3 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . payload setup = 16 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . stage-in = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . payload execution = 32 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . stage-out = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | . log creation = 0 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | ..............................
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 18:07:03] 2026-01-09 02:06:21,809 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963156530/pilotlog.txt
[2026-01-08 18:07:03] [end log extracts]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,824 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,825 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | 
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | job summary report
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | --------------------------------------------------
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | PanDA job id: 6963156530
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | task id: 47898826
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 18:04:07,581 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | pilot state: failed 
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | transexitcode: 65
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | exeerrorcode: 65
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | exitcode: 65
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | cpuconsumptiontime: 18 s
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | nevents: 0
[2026-01-08 18:07:03] 2026-01-09 02:06:21,901 | INFO     | neventsw: 0
[2026-01-08 18:07:03] 2026-01-09 02:06:21,902 | INFO     | pid: 324684
[2026-01-08 18:07:03] 2026-01-09 02:06:21,902 | INFO     | pgrp: 324684
[2026-01-08 18:07:03] 2026-01-09 02:06:21,902 | INFO     | corecount: 12
[2026-01-08 18:07:03] 2026-01-09 02:06:21,902 | INFO     | event service: False
[2026-01-08 18:07:03] 2026-01-09 02:06:21,902 | INFO     | sizes: {0: 2283965, 8: 2284227, 11: 2284255, 52: 2307418, 53: 2311738, 179: 2311936}
[2026-01-08 18:07:03] 2026-01-09 02:06:21,902 | INFO     | --------------------------------------------------
[2026-01-08 18:07:03] 2026-01-09 02:06:21,902 | INFO     | 
[2026-01-08 18:07:03] 2026-01-09 02:06:21,902 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,922 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,922 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 18:07:03] 2026-01-09 02:06:21,922 | INFO     | job 6963156530 has completed (purged errors)
[2026-01-08 18:07:03] 2026-01-09 02:06:21,922 | INFO     | overall cleanup function is called
[2026-01-08 18:07:03] 2026-01-09 02:06:22,928 | INFO     | --- collectZombieJob: --- 10, [324684]
[2026-01-08 18:07:03] 2026-01-09 02:06:22,928 | INFO     | zombie collector waiting for pid 324684
[2026-01-08 18:07:03] 2026-01-09 02:06:22,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 18:07:03] 2026-01-09 02:06:22,929 | INFO     | collected zombie processes
[2026-01-08 18:07:03] 2026-01-09 02:06:22,929 | INFO     | will attempt to kill all subprocesses of pid=324684
[2026-01-08 18:07:03] 2026-01-09 02:06:23,545 | INFO     | process IDs to be killed: [324684] (in reverse order)
[2026-01-08 18:07:03] 2026-01-09 02:06:23,671 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 18:07:03] 2026-01-09 02:06:23,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 18:07:03] 2026-01-09 02:06:23,679 | INFO     | did not find any defunct processes belonging to 324684
[2026-01-08 18:07:03] 2026-01-09 02:06:23,687 | INFO     | did not find any defunct processes belonging to 324684
[2026-01-08 18:07:03] 2026-01-09 02:06:23,688 | INFO     | ready for new job
[2026-01-08 18:07:03] 2026-01-09 02:06:23,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 18:07:03] 2026-01-09 02:06:23,689 | INFO     | ***************************************
[2026-01-08 18:07:03] 2026-01-09 02:06:23,689 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 18:07:03] 2026-01-09 02:06:23,689 | INFO     | ***************************************
[2026-01-08 18:07:03] 2026-01-09 02:06:23,689 | INFO     | 
[2026-01-08 18:07:03] 2026-01-09 02:06:23,691 | INFO     | architecture information:
[2026-01-08 18:07:03] 2026-01-09 02:06:23,691 | INFO     | executing command: cat /etc/os-release
[2026-01-08 18:07:03] 2026-01-09 02:06:23,750 | INFO     | cat /etc/os-release:
[2026-01-08 18:07:03] NAME="CentOS Linux"
[2026-01-08 18:07:03] VERSION="7 (Core)"
[2026-01-08 18:07:03] ID="centos"
[2026-01-08 18:07:03] ID_LIKE="rhel fedora"
[2026-01-08 18:07:03] VERSION_ID="7"
[2026-01-08 18:07:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 18:07:03] ANSI_COLOR="0;31"
[2026-01-08 18:07:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 18:07:03] HOME_URL="https://www.centos.org/"
[2026-01-08 18:07:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 18:07:03] 
[2026-01-08 18:07:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 18:07:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 18:07:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 18:07:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 18:07:03] 
[2026-01-08 18:07:03] 2026-01-09 02:06:23,750 | INFO     | ***************************************
[2026-01-08 18:07:03] 2026-01-09 02:06:24,270 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 18:07:03] 2026-01-09 02:06:24,318 | INFO     | sufficient remaining disk space (1138084544512 B)
[2026-01-08 18:07:03] 2026-01-09 02:06:24,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 18:07:03] 2026-01-09 02:06:24,318 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 18:07:03] 2026-01-09 02:06:24,319 | INFO     | update_server=False
[2026-01-08 18:07:03] 2026-01-09 02:06:24,319 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 18:07:03] 2026-01-09 02:06:24,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 18:07:03] 2026-01-09 02:06:24,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 18:07:03] 2026-01-09 02:06:24,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:07:03] 2026-01-09 02:06:24,320 | INFO     | aborting loop
[2026-01-08 18:07:03] 2026-01-09 02:06:24,963 | INFO     | all data control threads have been joined
[2026-01-08 18:07:03] 2026-01-09 02:06:25,037 | INFO     | all payload control threads have been joined
[2026-01-08 18:07:03] 2026-01-09 02:06:25,223 | INFO     | all job control threads have been joined
[2026-01-08 18:07:03] 2026-01-09 02:06:25,328 | INFO     | [job] retrieve thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:25,328 | INFO     | [job] job monitor thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:25,515 | INFO     | [job] validate thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:25,598 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:25,716 | INFO     | [payload] validate_post thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:25,787 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:25,842 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:25,968 | INFO     | [data] control thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:26,042 | INFO     | [payload] control thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:26,229 | INFO     | [job] control thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:26,330 | INFO     | [data] copytool_out thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:26,394 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:26,547 | INFO     | [payload] failed_post thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:26,587 | INFO     | [data] copytool_in thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:26,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:07:03] 2026-01-09 02:06:27,923 | INFO     | [job] queue monitor thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:28,332 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 18:07:03] 2026-01-09 02:06:53,990 | INFO     | PID=318055 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 18:07:03] 2026-01-09 02:06:53,990 | INFO     | .. there are 28 such processes running
[2026-01-08 18:07:03] 2026-01-09 02:06:53,990 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 18:07:03] 2026-01-09 02:06:53,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 18:07:03] 2026-01-09 02:06:53,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 18:07:03] 2026-01-09 02:06:56,007 | INFO     | [monitor] cgroup control has ended
[2026-01-08 18:07:03] 2026-01-09 02:06:58,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877437306688)>', '<ExcThread(monitor, started 139876531951360)>']
[2026-01-08 18:07:03] 2026-01-09 02:06:59,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 18:07:03] 2026-01-09 02:06:59,020 | INFO     | [monitor] control thread has ended
[2026-01-08 18:07:03] 2026-01-09 02:07:03,140 | INFO     | all workflow threads have been joined
[2026-01-08 18:07:03] 2026-01-09 02:07:03,140 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 18:07:03] 2026-01-09 02:07:03,141 | INFO     | traces error code: 0
[2026-01-08 18:07:03] 2026-01-09 02:07:03,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 18:07:03] 2026-01-09 02:07:03,364 [wrapper] ==== pilot stdout END ====
[2026-01-08 18:07:03] 2026-01-09 02:07:03,366 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 18:07:03] 2026-01-09 02:07:03,368 [wrapper] pilotpid: 318055
[2026-01-08 18:07:03] 2026-01-09 02:07:03,370 [wrapper] Pilot exit status: 0
[2026-01-08 18:07:03] 2026-01-09 02:07:03,415 [wrapper] pandaids: 6963156530
[2026-01-08 18:07:03] 2026-01-09 02:07:03,863 [wrapper] cleanup supervisor_pilot  318061 318056
[2026-01-08 18:07:03] 2026-01-09 02:07:03,866 [wrapper] Test setup, not cleaning
[2026-01-08 18:07:03] 2026-01-09 02:07:03,868 [wrapper] apfmon messages muted
[2026-01-08 18:07:03] 2026-01-09 02:07:03,870 [wrapper] ==== wrapper stdout END ====
[2026-01-08 18:07:03] 2026-01-09 02:07:03,873 [wrapper] ==== wrapper stderr END ====
[2026-01-08 18:07:03]  *** Error codes and diagnostics ***
[2026-01-08 18:07:03]     "exeErrorCode": 65,
[2026-01-08 18:07:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 18:07:03]     "pilotErrorCode": 1305,
[2026-01-08 18:07:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 18:07:03]  *** Listing of results directory ***
[2026-01-08 18:07:03] total 223812
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc    579449 Jan  8 11:06 pilot3.tar.gz
[2026-01-08 18:07:03] -rwx------. 1 boinc boinc     36322 Jan  8 11:10 runpilot2-wrapper.sh
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc      5112 Jan  8 11:11 queuedata.json
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc       100 Jan  8 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 18:07:03] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 18:02 run_atlas
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc       105 Jan  8 18:02 job.xml
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc      6595 Jan  8 18:02 init_data.xml
[2026-01-08 18:07:03] -rw-r--r--. 2 boinc boinc 225045496 Jan  8 18:02 EVNT.47898824._001204.pool.root.1
[2026-01-08 18:07:03] -rw-r--r--. 2 boinc boinc     15847 Jan  8 18:02 start_atlas.sh
[2026-01-08 18:07:03] drwxrwx--x. 2 boinc boinc      4096 Jan  8 18:02 shared
[2026-01-08 18:07:03] -rw-r--r--. 2 boinc boinc    592394 Jan  8 18:02 input.tar.gz
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc         0 Jan  8 18:02 boinc_lockfile
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc      2518 Jan  8 18:02 pandaJob.out
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc    989821 Jan  8 18:02 agis_schedconf.cvmfs.json
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc   1516240 Jan  8 18:02 agis_ddmendpoints.agis.ALL.json
[2026-01-08 18:07:03] drwx------. 5 boinc boinc      4096 Jan  8 18:02 pilot3
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc       522 Jan  8 18:04 boinc_task_state.xml
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc       953 Jan  8 18:04 memory_monitor_summary.json
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc     21117 Jan  8 18:04 log.47898826._031700.job.log.tgz.1
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc        95 Jan  8 18:05 pilot_heartbeat.json
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc      8391 Jan  8 18:06 heartbeat.json
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc      8192 Jan  8 18:07 boinc_mmap_file
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc        22 Jan  8 18:07 wrapper_checkpoint.txt
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc      4822 Jan  8 18:07 pilotlog.txt
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc     87603 Jan  8 18:07 log.47898826._031700.job.log.1
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc       188 Jan  8 18:07 output.list
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc       620 Jan  8 18:07 runtime_log
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc    133120 Jan  8 18:07 result.tar.gz
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc      8636 Jan  8 18:07 runtime_log.err
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc       644 Jan  8 18:07 Q4mLDmyZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDms9fKDmzjT1Nm.diag
[2026-01-08 18:07:03] -rw-r--r--. 1 boinc boinc     21695 Jan  8 18:07 stderr.txt
[2026-01-08 18:07:03] No HITS result produced
[2026-01-08 18:07:03]  *** Contents of shared directory: ***
[2026-01-08 18:07:03] total 220504
[2026-01-08 18:07:03] -rw-r--r--. 2 boinc boinc 225045496 Jan  8 18:02 ATLAS.root_0
[2026-01-08 18:07:03] -rw-r--r--. 2 boinc boinc     15847 Jan  8 18:02 start_atlas.sh
[2026-01-08 18:07:03] -rw-r--r--. 2 boinc boinc    592394 Jan  8 18:02 input.tar.gz
[2026-01-08 18:07:03] -rw-------. 1 boinc boinc    133120 Jan  8 18:07 result.tar.gz
18:07:05 (314290): run_atlas exited; CPU time 25.531282
18:07:05 (314290): called boinc_finish(0)

</stderr_txt>
]]>

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