Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:39:52 (32458): wrapper (7.7.26015): starting
20:39:52 (32458): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 20:39:52] Arguments: --nthreads 8
[2026-01-08 20:39:52] Threads: 8
[2026-01-08 20:39:52] Checking for CVMFS
[2026-01-08 20:39:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:39:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:39:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:39:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:39:53] 2.11.2.0 2888 111576 109676 154926 3 58 18818729 20275201 1 130560 0 23153617 99.769 7627379 32364 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 20:39:53] CVMFS is ok
[2026-01-08 20:39:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:39:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:39:53] Further information can be found at the LHC@home message board.
[2026-01-08 20:39:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:39:53] Checking for apptainer binary...
[2026-01-08 20:39:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:39:53] Running /usr/bin/apptainer --version
[2026-01-08 20:39:53] apptainer version 1.3.2-1.el7
[2026-01-08 20:39:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:39:55] c-204-6.aglt2.org
[2026-01-08 20:39:55] apptainer works
[2026-01-08 20:39:55] Set ATHENA_PROC_NUMBER=8
[2026-01-08 20:39:55] Set ATHENA_CORE_NUMBER=8
[2026-01-08 20:39:55] Starting ATLAS job with PandaID=6963156388
[2026-01-08 20:39:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:32:36]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:32:36] 2026-01-09 04:31:30,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 23:32:36] 2026-01-09 04:31:32,648 | INFO     | time since job start (10279s) is within the limit (349056.0s)
[2026-01-08 23:32:36] 2026-01-09 04:31:33,431 | INFO     | monitor loop #757: job 0:6963156388 is in state 'finished'
[2026-01-08 23:32:36] 2026-01-09 04:31:33,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 23:32:36] 2026-01-09 04:31:34,654 | INFO     | time since job start (10281s) is within the limit (349056.0s)
[2026-01-08 23:32:36] 2026-01-09 04:31:35,934 | INFO     | monitor loop #758: job 0:6963156388 is in state 'finished'
[2026-01-08 23:32:36] 2026-01-09 04:31:35,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 23:32:36] 2026-01-09 04:31:36,240 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 23:32:36] 2026-01-09 04:31:36,244 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-08 23:32:36] 2026-01-09 04:31:36,246 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963156388/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:32:36] 2026-01-09 04:31:36,247 | INFO     | extracted standard info from prmon json
[2026-01-08 23:32:36] 2026-01-09 04:31:36,247 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:32:36] 2026-01-09 04:31:36,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:32:36] 2026-01-09 04:31:36,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:32:36] 2026-01-09 04:31:36,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:32:36] 2026-01-09 04:31:36,252 | INFO     | fitting pss+swap vs Time
[2026-01-08 23:32:36] 2026-01-09 04:31:36,253 | INFO     | sum of square deviations: 1470248962.0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,254 | INFO     | sum of deviations: -3430796037.999997
[2026-01-08 23:32:36] 2026-01-09 04:31:36,254 | INFO     | mean x: 1767927938.5
[2026-01-08 23:32:36] 2026-01-09 04:31:36,254 | INFO     | mean y: 2530698.0714285714
[2026-01-08 23:32:36] 2026-01-09 04:31:36,255 | INFO     | intersect: 4127954570.926578
[2026-01-08 23:32:36] 2026-01-09 04:31:36,255 | INFO     | chi2: 1.5468008557533655
[2026-01-08 23:32:36] 2026-01-09 04:31:36,255 | INFO     | sum of square deviations: 1342841922.0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,257 | INFO     | sum of deviations: -3198295147.999998
[2026-01-08 23:32:36] 2026-01-09 04:31:36,257 | INFO     | mean x: 1767927786.0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,257 | INFO     | mean y: 2530976.4662576686
[2026-01-08 23:32:36] 2026-01-09 04:31:36,257 | INFO     | intersect: 4213268493.17761
[2026-01-08 23:32:36] 2026-01-09 04:31:36,257 | INFO     | chi2: 1.5466122157263684
[2026-01-08 23:32:36] 2026-01-09 04:31:36,257 | INFO     | current chi2=1.5466122157263684 (change=0.01219549538619545 %)
[2026-01-08 23:32:36] 2026-01-09 04:31:36,258 | INFO     | right removable region: 162
[2026-01-08 23:32:36] 2026-01-09 04:31:36,258 | INFO     | sum of square deviations: 1342841922.0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,259 | INFO     | sum of deviations: -27642279319.999996
[2026-01-08 23:32:36] 2026-01-09 04:31:36,259 | INFO     | mean x: 1767928091.0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,259 | INFO     | mean y: 2559264.625766871
[2026-01-08 23:32:36] 2026-01-09 04:31:36,259 | INFO     | intersect: 36395198866.099556
[2026-01-08 23:32:36] 2026-01-09 04:31:36,259 | INFO     | chi2: 0.1551652177213922
[2026-01-08 23:32:36] 2026-01-09 04:31:36,260 | INFO     | current chi2=0.1551652177213922 (change=89.96863641856343 %)
[2026-01-08 23:32:36] 2026-01-09 04:31:36,260 | INFO     | sum of square deviations: 1223016419.5
[2026-01-08 23:32:36] 2026-01-09 04:31:36,261 | INFO     | sum of deviations: -25037050998.999992
[2026-01-08 23:32:36] 2026-01-09 04:31:36,261 | INFO     | mean x: 1767928243.5
[2026-01-08 23:32:36] 2026-01-09 04:31:36,261 | INFO     | mean y: 2555897.506329114
[2026-01-08 23:32:36] 2026-01-09 04:31:36,261 | INFO     | intersect: 36194800653.45008
[2026-01-08 23:32:36] 2026-01-09 04:31:36,262 | INFO     | chi2: 0.14497884122375346
[2026-01-08 23:32:36] 2026-01-09 04:31:36,262 | INFO     | current chi2=0.14497884122375346 (change=6.5648581861489985 %)
[2026-01-08 23:32:36] 2026-01-09 04:31:36,262 | INFO     | left removable region: 20
[2026-01-08 23:32:36] 2026-01-09 04:31:36,262 | INFO     | sum of square deviations: 887813855.5
[2026-01-08 23:32:36] 2026-01-09 04:31:36,263 | INFO     | sum of deviations: -14003338669.0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,263 | INFO     | mean x: 1767928365.5
[2026-01-08 23:32:36] 2026-01-09 04:31:36,263 | INFO     | mean y: 2541963.8450704226
[2026-01-08 23:32:36] 2026-01-09 04:31:36,263 | INFO     | intersect: 27887778819.813595
[2026-01-08 23:32:36] 2026-01-09 04:31:36,264 | INFO     | chi2: 0.11390897400798787
[2026-01-08 23:32:36] 2026-01-09 04:31:36,264 | INFO     | current memory leak: -15.77 B/s (using 142 data points, chi2=0.11)
[2026-01-08 23:32:36] 2026-01-09 04:31:36,264 | INFO     | could have reported an average CPU frequency of 2012 MHz (9 samples)
[2026-01-08 23:32:36] 2026-01-09 04:31:36,265 | INFO     | ..............................
[2026-01-08 23:32:36] 2026-01-09 04:31:36,265 | INFO     | . Timing measurements:
[2026-01-08 23:32:36] 2026-01-09 04:31:36,265 | INFO     | . get job = 0 s
[2026-01-08 23:32:36] 2026-01-09 04:31:36,265 | INFO     | . initial setup = 2 s
[2026-01-08 23:32:36] 2026-01-09 04:31:36,265 | INFO     | . payload setup = 8 s
[2026-01-08 23:32:36] 2026-01-09 04:31:36,265 | INFO     | . stage-in = 0 s
[2026-01-08 23:32:36] 2026-01-09 04:31:36,265 | INFO     | . payload execution = 10241 s
[2026-01-08 23:32:36] 2026-01-09 04:31:36,265 | INFO     | . stage-out = 0 s
[2026-01-08 23:32:36] 2026-01-09 04:31:36,266 | INFO     | . log creation = 0 s
[2026-01-08 23:32:36] 2026-01-09 04:31:36,266 | INFO     | ..............................
[2026-01-08 23:32:36] 2026-01-09 04:31:36,579 | INFO     | 
[2026-01-08 23:32:36] 2026-01-09 04:31:36,579 | INFO     | job summary report
[2026-01-08 23:32:36] 2026-01-09 04:31:36,579 | INFO     | --------------------------------------------------
[2026-01-08 23:32:36] 2026-01-09 04:31:36,579 | INFO     | PanDA job id: 6963156388
[2026-01-08 23:32:36] 2026-01-09 04:31:36,580 | INFO     | task id: 47898826
[2026-01-08 23:32:36] 2026-01-09 04:31:36,580 | INFO     | errors: (none)
[2026-01-08 23:32:36] 2026-01-09 04:31:36,580 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:32:36] 2026-01-09 04:31:36,580 | INFO     | pilot state: finished 
[2026-01-08 23:32:36] 2026-01-09 04:31:36,580 | INFO     | transexitcode: 0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,580 | INFO     | exeerrorcode: 0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,581 | INFO     | exeerrordiag: 
[2026-01-08 23:32:36] 2026-01-09 04:31:36,581 | INFO     | exitcode: 0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,581 | INFO     | exitmsg: OK
[2026-01-08 23:32:36] 2026-01-09 04:31:36,581 | INFO     | cpuconsumptiontime: 77961 s
[2026-01-08 23:32:36] 2026-01-09 04:31:36,581 | INFO     | nevents: 400
[2026-01-08 23:32:36] 2026-01-09 04:31:36,581 | INFO     | neventsw: 0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,582 | INFO     | pid: 10423
[2026-01-08 23:32:36] 2026-01-09 04:31:36,582 | INFO     | pgrp: 10423
[2026-01-08 23:32:36] 2026-01-09 04:31:36,582 | INFO     | corecount: 8
[2026-01-08 23:32:36] 2026-01-09 04:31:36,582 | INFO     | event service: False
[2026-01-08 23:32:36] 2026-01-09 04:31:36,582 | INFO     | sizes: {0: 2283968, 6: 2284230, 11: 2284258, 10253: 2312929, 10254: 2321927, 10255: 2321983, 10265: 2322369}
[2026-01-08 23:32:36] 2026-01-09 04:31:36,583 | INFO     | --------------------------------------------------
[2026-01-08 23:32:36] 2026-01-09 04:31:36,583 | INFO     | 
[2026-01-08 23:32:36] 2026-01-09 04:31:36,583 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 23:32:36] 2026-01-09 04:31:36,612 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,613 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,613 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,613 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,616 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:32:36] 2026-01-09 04:31:36,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,616 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:32:36] 2026-01-09 04:31:36,617 | INFO     | job 6963156388 has completed (purged errors)
[2026-01-08 23:32:36] 2026-01-09 04:31:36,617 | INFO     | overall cleanup function is called
[2026-01-08 23:32:36] 2026-01-09 04:31:37,625 | INFO     | --- collectZombieJob: --- 10, [10423]
[2026-01-08 23:32:36] 2026-01-09 04:31:37,625 | INFO     | zombie collector waiting for pid 10423
[2026-01-08 23:32:36] 2026-01-09 04:31:37,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:32:36] 2026-01-09 04:31:37,625 | INFO     | collected zombie processes
[2026-01-08 23:32:36] 2026-01-09 04:31:37,626 | INFO     | will attempt to kill all subprocesses of pid=10423
[2026-01-08 23:32:36] 2026-01-09 04:31:37,715 | INFO     | process IDs to be killed: [10423] (in reverse order)
[2026-01-08 23:32:36] 2026-01-09 04:31:37,774 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:32:36] 2026-01-09 04:31:37,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:32:36] 2026-01-09 04:31:37,778 | INFO     | did not find any defunct processes belonging to 10423
[2026-01-08 23:32:36] 2026-01-09 04:31:37,782 | INFO     | did not find any defunct processes belonging to 10423
[2026-01-08 23:32:36] 2026-01-09 04:31:37,782 | INFO     | ready for new job
[2026-01-08 23:32:36] 2026-01-09 04:31:37,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:32:36] 2026-01-09 04:31:37,784 | INFO     | ***************************************
[2026-01-08 23:32:36] 2026-01-09 04:31:37,784 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:32:36] 2026-01-09 04:31:37,785 | INFO     | ***************************************
[2026-01-08 23:32:36] 2026-01-09 04:31:37,785 | INFO     | 
[2026-01-08 23:32:36] 2026-01-09 04:31:37,785 | INFO     | architecture information:
[2026-01-08 23:32:36] 2026-01-09 04:31:37,786 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:32:36] 2026-01-09 04:31:37,805 | INFO     | cat /etc/os-release:
[2026-01-08 23:32:36] NAME="CentOS Linux"
[2026-01-08 23:32:36] VERSION="7 (Core)"
[2026-01-08 23:32:36] ID="centos"
[2026-01-08 23:32:36] ID_LIKE="rhel fedora"
[2026-01-08 23:32:36] VERSION_ID="7"
[2026-01-08 23:32:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:32:36] ANSI_COLOR="0;31"
[2026-01-08 23:32:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:32:36] HOME_URL="https://www.centos.org/"
[2026-01-08 23:32:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:32:36] 
[2026-01-08 23:32:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:32:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:32:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:32:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:32:36] 
[2026-01-08 23:32:36] 2026-01-09 04:31:37,805 | INFO     | ***************************************
[2026-01-08 23:32:36] 2026-01-09 04:31:38,308 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 23:32:36] 2026-01-09 04:31:38,330 | INFO     | sufficient remaining disk space (18533580800 B)
[2026-01-08 23:32:36] 2026-01-09 04:31:38,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:32:36] 2026-01-09 04:31:38,331 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:32:36] 2026-01-09 04:31:38,331 | INFO     | update_server=False
[2026-01-08 23:32:36] 2026-01-09 04:31:38,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:32:36] 2026-01-09 04:31:38,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:32:36] 2026-01-09 04:31:38,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:32:36] 2026-01-09 04:31:38,388 | INFO     | all data control threads have been joined
[2026-01-08 23:32:36] 2026-01-09 04:31:38,438 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 23:32:36] 2026-01-09 04:31:38,438 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 23:32:36] 2026-01-09 04:31:38,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:32:36] 2026-01-09 04:31:38,439 | INFO     | will abort loop
[2026-01-08 23:32:36] 2026-01-09 04:31:38,576 | INFO     | all payload control threads have been joined
[2026-01-08 23:32:36] 2026-01-09 04:31:39,337 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:39,337 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:39,391 | INFO     | [data] control thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:39,444 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:39,582 | INFO     | [payload] control thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:39,628 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:39,742 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:39,822 | INFO     | all job control threads have been joined
[2026-01-08 23:32:36] 2026-01-09 04:31:39,932 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:39,993 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:40,077 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:40,234 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:40,371 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:40,463 | INFO     | [job] validate thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:40,824 | INFO     | [job] control thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:41,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:32:36] 2026-01-09 04:31:45,367 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:31:48,649 | INFO     | job.realtimelogging is not enabled
[2026-01-08 23:32:36] 2026-01-09 04:31:49,655 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:32:36] 2026-01-09 04:32:07,867 | INFO     | PID=3998 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 23:32:36] 2026-01-09 04:32:07,867 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:32:36] 2026-01-09 04:32:07,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:32:36] 2026-01-09 04:32:07,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:32:36] 2026-01-09 04:32:29,708 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:32:36] 2026-01-09 04:32:30,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506030823232)>', '<ExcThread(monitor, started 140505224574720)>']
[2026-01-08 23:32:36] 2026-01-09 04:32:30,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:32:36] 2026-01-09 04:32:30,977 | INFO     | [monitor] control thread has ended
[2026-01-08 23:32:36] 2026-01-09 04:32:35,714 | INFO     | all workflow threads have been joined
[2026-01-08 23:32:36] 2026-01-09 04:32:35,715 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:32:36] 2026-01-09 04:32:35,715 | INFO     | traces error code: 0
[2026-01-08 23:32:36] 2026-01-09 04:32:35,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:32:36] 2026-01-09 04:32:35,832 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:32:36] 2026-01-09 04:32:35,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:32:36] 2026-01-09 04:32:35,843 [wrapper] pilotpid: 3998
[2026-01-08 23:32:36] 2026-01-09 04:32:35,848 [wrapper] Pilot exit status: 0
[2026-01-08 23:32:36] 2026-01-09 04:32:35,867 [wrapper] pandaids: 6963156388
[2026-01-08 23:32:36] 2026-01-09 04:32:35,917 [wrapper] cleanup supervisor_pilot 29053 3999
[2026-01-08 23:32:36] 2026-01-09 04:32:35,922 [wrapper] Test setup, not cleaning
[2026-01-08 23:32:36] 2026-01-09 04:32:35,928 [wrapper] apfmon messages muted
[2026-01-08 23:32:36] 2026-01-09 04:32:35,933 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:32:36] 2026-01-09 04:32:35,937 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:32:36]  *** Error codes and diagnostics ***
[2026-01-08 23:32:36]     "exeErrorCode": 0,
[2026-01-08 23:32:36]     "exeErrorDiag": "",
[2026-01-08 23:32:36]     "pilotErrorCode": 0,
[2026-01-08 23:32:36]     "pilotErrorDiag": "",
[2026-01-08 23:32:36]  *** Listing of results directory ***
[2026-01-08 23:32:36] total 439184
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-08 23:32:36] -rwx------ 1 boincer umatlas     36322 Jan  8 14:10 runpilot2-wrapper.sh
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 14:11 queuedata.json
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas       100 Jan  8 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:32:36] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 20:39 run_atlas
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas       105 Jan  8 20:39 job.xml
[2026-01-08 23:32:36] -rw-r--r-- 2 boincer umatlas 225353432 Jan  8 20:39 EVNT.47898824._000902.pool.root.1
[2026-01-08 23:32:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 20:39 start_atlas.sh
[2026-01-08 23:32:36] drwxrwx--x 2 boincer umatlas      4096 Jan  8 20:39 shared
[2026-01-08 23:32:36] -rw-r--r-- 2 boincer umatlas    592399 Jan  8 20:39 input.tar.gz
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas         0 Jan  8 20:39 boinc_lockfile
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas      2518 Jan  8 20:39 pandaJob.out
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas        57 Jan  8 20:39 setup.sh.local
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas    989821 Jan  8 20:40 agis_schedconf.cvmfs.json
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas   1516240 Jan  8 20:40 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:32:36] drwx------ 5 boincer umatlas      4096 Jan  8 20:40 pilot3
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas      5910 Jan  8 23:30 init_data.xml
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas 216802422 Jan  8 23:30 HITS.47898826._031558.pool.root.1
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas       530 Jan  8 23:31 boinc_task_state.xml
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas      1048 Jan  8 23:31 memory_monitor_summary.json
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas    403086 Jan  8 23:31 log.47898826._031558.job.log.tgz.1
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas      7847 Jan  8 23:31 heartbeat.json
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas        95 Jan  8 23:32 pilot_heartbeat.json
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas        28 Jan  8 23:32 wrapper_checkpoint.txt
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 23:32 boinc_mmap_file
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas      5003 Jan  8 23:32 pilotlog.txt
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas   1425836 Jan  8 23:32 log.47898826._031558.job.log.1
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas       357 Jan  8 23:32 output.list
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas       620 Jan  8 23:32 runtime_log
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas   1843200 Jan  8 23:32 result.tar.gz
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas       661 Jan  8 23:32 SOHODmmZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmI9fKDmilz0Kn.diag
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas      9338 Jan  8 23:32 runtime_log.err
[2026-01-08 23:32:36] -rw-r--r-- 1 boincer umatlas     21280 Jan  8 23:32 stderr.txt
[2026-01-08 23:32:36] HITS file was successfully produced:
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas 216802422 Jan  8 23:30 shared/HITS.pool.root.1
[2026-01-08 23:32:36]  *** Contents of shared directory: ***
[2026-01-08 23:32:36] total 434196
[2026-01-08 23:32:36] -rw-r--r-- 2 boincer umatlas 225353432 Jan  8 20:39 ATLAS.root_0
[2026-01-08 23:32:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 20:39 start_atlas.sh
[2026-01-08 23:32:36] -rw-r--r-- 2 boincer umatlas    592399 Jan  8 20:39 input.tar.gz
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas 216802422 Jan  8 23:30 HITS.pool.root.1
[2026-01-08 23:32:36] -rw------- 1 boincer umatlas   1843200 Jan  8 23:32 result.tar.gz
23:32:37 (32458): run_atlas exited; CPU time 77915.097873
23:32:37 (32458): called boinc_finish(0)

</stderr_txt>
]]>

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