Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:41:16 (9529): wrapper (7.7.26015): starting
06:41:16 (9529): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:41:16] Arguments: --nthreads 8
[2026-01-09 06:41:16] Threads: 8
[2026-01-09 06:41:16] Checking for CVMFS
[2026-01-09 06:41:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:41:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:41:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:41:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:41:17] 2.11.2.0 17738 35009 121264 154933 3 57 18936253 25165825 0 130560 0 15335746 99.814 10243738 3627 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 06:41:17] CVMFS is ok
[2026-01-09 06:41:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:41:17] Checking for apptainer binary...
[2026-01-09 06:41:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:41:17] Running /usr/bin/apptainer --version
[2026-01-09 06:41:17] apptainer version 1.3.2-1.el7
[2026-01-09 06:41:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:41:18] cg-vwn450.simple-grid.lan
[2026-01-09 06:41:18] apptainer works
[2026-01-09 06:41:18] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:41:18] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:41:18] Starting ATLAS job with PandaID=6963156373
[2026-01-09 06:41:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:33:58]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:33:58] 2026-01-09 08:33:13,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:33:58] 2026-01-09 08:33:13,822 | INFO     | time since job start (10297s) is within the limit (349056.0s)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,420 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 09:33:58] 2026-01-09 08:33:14,421 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 09:33:58] 2026-01-09 08:33:14,423 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6963156373/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,424 | INFO     | extracted standard info from prmon json
[2026-01-09 09:33:58] 2026-01-09 08:33:14,424 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:33:58] 2026-01-09 08:33:14,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:33:58] 2026-01-09 08:33:14,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:33:58] 2026-01-09 08:33:14,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:33:58] 2026-01-09 08:33:14,429 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:33:58] 2026-01-09 08:33:14,430 | INFO     | sum of square deviations: 1496660620.0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,431 | INFO     | sum of deviations: -9328709869.999998
[2026-01-09 09:33:58] 2026-01-09 08:33:14,431 | INFO     | mean x: 1767942456.0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,432 | INFO     | mean y: 2495748.0473372783
[2026-01-09 09:33:58] 2026-01-09 08:33:14,432 | INFO     | intersect: 11022109692.910292
[2026-01-09 09:33:58] 2026-01-09 08:33:14,432 | INFO     | chi2: 2.4351720840493227
[2026-01-09 09:33:58] 2026-01-09 08:33:14,433 | INFO     | sum of square deviations: 1367709365.0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,434 | INFO     | sum of deviations: 1970792483.4999995
[2026-01-09 09:33:58] 2026-01-09 08:33:14,434 | INFO     | mean x: 1767942303.5
[2026-01-09 09:33:58] 2026-01-09 08:33:14,434 | INFO     | mean y: 2508795.5792682925
[2026-01-09 09:33:58] 2026-01-09 08:33:14,434 | INFO     | intersect: -2544996904.214982
[2026-01-09 09:33:58] 2026-01-09 08:33:14,435 | INFO     | chi2: 1.6763684210863612
[2026-01-09 09:33:58] 2026-01-09 08:33:14,435 | INFO     | current chi2=1.6763684210863612 (change=31.16016596663616 %)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,435 | INFO     | sum of square deviations: 1246386160.0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,436 | INFO     | sum of deviations: 1936048317.0000005
[2026-01-09 09:33:58] 2026-01-09 08:33:14,437 | INFO     | mean x: 1767942151.0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,437 | INFO     | mean y: 2508751.8805031446
[2026-01-09 09:33:58] 2026-01-09 08:33:14,437 | INFO     | intersect: -2743687840.993178
[2026-01-09 09:33:58] 2026-01-09 08:33:14,438 | INFO     | chi2: 1.6767919653875285
[2026-01-09 09:33:58] 2026-01-09 08:33:14,438 | INFO     | current chi2=1.6767919653875285 (change=-0.02526558576502149 %)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,438 | INFO     | right removable region: 158
[2026-01-09 09:33:58] 2026-01-09 08:33:14,438 | INFO     | sum of square deviations: 1367709365.0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,439 | INFO     | sum of deviations: -34957476058.0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,440 | INFO     | mean x: 1767942608.5
[2026-01-09 09:33:58] 2026-01-09 08:33:14,440 | INFO     | mean y: 2525644.9024390243
[2026-01-09 09:33:58] 2026-01-09 08:33:14,440 | INFO     | intersect: 45189619474.999016
[2026-01-09 09:33:58] 2026-01-09 08:33:14,440 | INFO     | chi2: 0.9551400636437433
[2026-01-09 09:33:58] 2026-01-09 08:33:14,441 | INFO     | current chi2=0.9551400636437433 (change=60.77730728353744 %)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,441 | INFO     | sum of square deviations: 1246386160.0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,442 | INFO     | sum of deviations: -34886042252.0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,442 | INFO     | mean x: 1767942761.0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,442 | INFO     | mean y: 2525488.389937107
[2026-01-09 09:33:58] 2026-01-09 08:33:14,443 | INFO     | intersect: 49486808801.80826
[2026-01-09 09:33:58] 2026-01-09 08:33:14,443 | INFO     | chi2: 0.9339553729057621
[2026-01-09 09:33:58] 2026-01-09 08:33:14,443 | INFO     | current chi2=0.9339553729057621 (change=2.217966929076779 %)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,443 | INFO     | left removable region: 20
[2026-01-09 09:33:58] 2026-01-09 08:33:14,443 | INFO     | sum of square deviations: 814878534.5
[2026-01-09 09:33:58] 2026-01-09 08:33:14,444 | INFO     | sum of deviations: -13037347396.5
[2026-01-09 09:33:58] 2026-01-09 08:33:14,445 | INFO     | mean x: 1767942730.5
[2026-01-09 09:33:58] 2026-01-09 08:33:14,445 | INFO     | mean y: 2526077.3985507246
[2026-01-09 09:33:58] 2026-01-09 08:33:14,445 | INFO     | intersect: 28288071197.062366
[2026-01-09 09:33:58] 2026-01-09 08:33:14,445 | INFO     | chi2: 0.1129864308709081
[2026-01-09 09:33:58] 2026-01-09 08:33:14,445 | INFO     | current memory leak: -16.00 B/s (using 138 data points, chi2=0.11)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,446 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,446 | INFO     | ..............................
[2026-01-09 09:33:58] 2026-01-09 08:33:14,446 | INFO     | . Timing measurements:
[2026-01-09 09:33:58] 2026-01-09 08:33:14,446 | INFO     | . get job = 0 s
[2026-01-09 09:33:58] 2026-01-09 08:33:14,447 | INFO     | . initial setup = 2 s
[2026-01-09 09:33:58] 2026-01-09 08:33:14,447 | INFO     | . payload setup = 8 s
[2026-01-09 09:33:58] 2026-01-09 08:33:14,447 | INFO     | . stage-in = 0 s
[2026-01-09 09:33:58] 2026-01-09 08:33:14,447 | INFO     | . payload execution = 10259 s
[2026-01-09 09:33:58] 2026-01-09 08:33:14,447 | INFO     | . stage-out = 1 s
[2026-01-09 09:33:58] 2026-01-09 08:33:14,447 | INFO     | . log creation = 0 s
[2026-01-09 09:33:58] 2026-01-09 08:33:14,447 | INFO     | ..............................
[2026-01-09 09:33:58] 2026-01-09 08:33:14,564 | INFO     | 
[2026-01-09 09:33:58] 2026-01-09 08:33:14,565 | INFO     | job summary report
[2026-01-09 09:33:58] 2026-01-09 08:33:14,565 | INFO     | --------------------------------------------------
[2026-01-09 09:33:58] 2026-01-09 08:33:14,565 | INFO     | PanDA job id: 6963156373
[2026-01-09 09:33:58] 2026-01-09 08:33:14,565 | INFO     | task id: 47898826
[2026-01-09 09:33:58] 2026-01-09 08:33:14,565 | INFO     | errors: (none)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,565 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:33:58] 2026-01-09 08:33:14,565 | INFO     | pilot state: finished 
[2026-01-09 09:33:58] 2026-01-09 08:33:14,565 | INFO     | transexitcode: 0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | exeerrorcode: 0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | exeerrordiag: 
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | exitcode: 0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | exitmsg: OK
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | cpuconsumptiontime: 77427 s
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | nevents: 400
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | neventsw: 0
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | pid: 19721
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | pgrp: 19721
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | corecount: 8
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | event service: False
[2026-01-09 09:33:58] 2026-01-09 08:33:14,566 | INFO     | sizes: {0: 2283970, 1: 2283998, 7: 2284260, 12: 2284288, 10271: 2312715, 10273: 2321899, 10281: 2322101}
[2026-01-09 09:33:58] 2026-01-09 08:33:14,567 | INFO     | --------------------------------------------------
[2026-01-09 09:33:58] 2026-01-09 08:33:14,567 | INFO     | 
[2026-01-09 09:33:58] 2026-01-09 08:33:14,567 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-09 09:33:58] 2026-01-09 08:33:14,592 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,593 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,593 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,593 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,594 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,595 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:33:58] 2026-01-09 08:33:14,595 | INFO     | job 6963156373 has completed (purged errors)
[2026-01-09 09:33:58] 2026-01-09 08:33:14,595 | INFO     | overall cleanup function is called
[2026-01-09 09:33:58] 2026-01-09 08:33:15,603 | INFO     | --- collectZombieJob: --- 10, [19721]
[2026-01-09 09:33:58] 2026-01-09 08:33:15,604 | INFO     | zombie collector waiting for pid 19721
[2026-01-09 09:33:58] 2026-01-09 08:33:15,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:33:58] 2026-01-09 08:33:15,604 | INFO     | collected zombie processes
[2026-01-09 09:33:58] 2026-01-09 08:33:15,604 | INFO     | will attempt to kill all subprocesses of pid=19721
[2026-01-09 09:33:58] 2026-01-09 08:33:15,670 | INFO     | process IDs to be killed: [19721] (in reverse order)
[2026-01-09 09:33:58] 2026-01-09 08:33:15,722 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:33:58] 2026-01-09 08:33:15,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:33:58] 2026-01-09 08:33:15,725 | INFO     | did not find any defunct processes belonging to 19721
[2026-01-09 09:33:58] 2026-01-09 08:33:15,726 | INFO     | did not find any defunct processes belonging to 19721
[2026-01-09 09:33:58] 2026-01-09 08:33:15,726 | INFO     | ready for new job
[2026-01-09 09:33:58] 2026-01-09 08:33:15,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:33:58] 2026-01-09 08:33:15,728 | INFO     | ***************************************
[2026-01-09 09:33:58] 2026-01-09 08:33:15,728 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:33:58] 2026-01-09 08:33:15,729 | INFO     | ***************************************
[2026-01-09 09:33:58] 2026-01-09 08:33:15,729 | INFO     | 
[2026-01-09 09:33:58] 2026-01-09 08:33:15,729 | INFO     | pilot is running in a VM
[2026-01-09 09:33:58] 2026-01-09 08:33:15,729 | INFO     | architecture information:
[2026-01-09 09:33:58] 2026-01-09 08:33:15,730 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:33:58] 2026-01-09 08:33:15,748 | INFO     | cat /etc/os-release:
[2026-01-09 09:33:58] NAME="CentOS Linux"
[2026-01-09 09:33:58] VERSION="7 (Core)"
[2026-01-09 09:33:58] ID="centos"
[2026-01-09 09:33:58] ID_LIKE="rhel fedora"
[2026-01-09 09:33:58] VERSION_ID="7"
[2026-01-09 09:33:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:33:58] ANSI_COLOR="0;31"
[2026-01-09 09:33:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:33:58] HOME_URL="https://www.centos.org/"
[2026-01-09 09:33:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:33:58] 
[2026-01-09 09:33:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:33:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:33:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:33:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:33:58] 
[2026-01-09 09:33:58] 2026-01-09 08:33:15,749 | INFO     | ***************************************
[2026-01-09 09:33:58] 2026-01-09 08:33:16,252 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-09 09:33:58] 2026-01-09 08:33:16,284 | INFO     | sufficient remaining disk space (498306383872 B)
[2026-01-09 09:33:58] 2026-01-09 08:33:16,284 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:33:58] 2026-01-09 08:33:16,284 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:33:58] 2026-01-09 08:33:16,284 | INFO     | update_server=False
[2026-01-09 09:33:58] 2026-01-09 08:33:16,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:33:58] 2026-01-09 08:33:16,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:33:58] 2026-01-09 08:33:16,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:33:58] 2026-01-09 08:33:16,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:33:58] 2026-01-09 08:33:16,823 | INFO     | all data control threads have been joined
[2026-01-09 09:33:58] 2026-01-09 08:33:17,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:33:58] 2026-01-09 08:33:17,176 | INFO     | aborting loop
[2026-01-09 09:33:58] 2026-01-09 08:33:17,229 | INFO     | all job control threads have been joined
[2026-01-09 09:33:58] 2026-01-09 08:33:17,290 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:17,291 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:17,330 | INFO     | all payload control threads have been joined
[2026-01-09 09:33:58] 2026-01-09 08:33:17,748 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:17,818 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:17,829 | INFO     | [data] control thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:17,849 | INFO     | [job] validate thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:18,182 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:18,235 | INFO     | [job] control thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:18,335 | INFO     | [payload] control thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:18,447 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:18,539 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:18,555 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:18,593 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:18,747 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:18,756 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:20,659 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:33:58] 2026-01-09 08:33:46,913 | INFO     | PID=13253 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:33:58] 2026-01-09 08:33:46,914 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:33:58] 2026-01-09 08:33:46,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:33:58] 2026-01-09 08:33:46,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:33:58] 2026-01-09 08:33:52,947 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:33:58] 2026-01-09 08:33:53,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825567647552)>', '<ExcThread(monitor, started 139825118168832)>']
[2026-01-09 09:33:58] 2026-01-09 08:33:53,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:33:58] 2026-01-09 08:33:53,949 | INFO     | [monitor] control thread has ended
[2026-01-09 09:33:58] 2026-01-09 08:33:58,454 | INFO     | all workflow threads have been joined
[2026-01-09 09:33:58] 2026-01-09 08:33:58,454 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:33:58] 2026-01-09 08:33:58,454 | INFO     | traces error code: 0
[2026-01-09 09:33:58] 2026-01-09 08:33:58,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:33:58] 2026-01-09 08:33:58,594 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:33:58] 2026-01-09 08:33:58,598 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:33:58] 2026-01-09 08:33:58,602 [wrapper] pilotpid: 13253
[2026-01-09 09:33:58] 2026-01-09 08:33:58,606 [wrapper] Pilot exit status: 0
[2026-01-09 09:33:58] 2026-01-09 08:33:58,623 [wrapper] pandaids: 6963156373
[2026-01-09 09:33:58] 2026-01-09 08:33:58,657 [wrapper] cleanup supervisor_pilot  4714 13254
[2026-01-09 09:33:58] 2026-01-09 08:33:58,661 [wrapper] Test setup, not cleaning
[2026-01-09 09:33:58] 2026-01-09 08:33:58,666 [wrapper] apfmon messages muted
[2026-01-09 09:33:58] 2026-01-09 08:33:58,670 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:33:58] 2026-01-09 08:33:58,673 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:33:58]  *** Error codes and diagnostics ***
[2026-01-09 09:33:58]     "exeErrorCode": 0,
[2026-01-09 09:33:58]     "exeErrorDiag": "",
[2026-01-09 09:33:58]     "pilotErrorCode": 0,
[2026-01-09 09:33:58]     "pilotErrorDiag": "",
[2026-01-09 09:33:58]  *** Listing of results directory ***
[2026-01-09 09:33:58] total 443508
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 09:33:58] -rwx------. 1 boinc boinc     36322 Jan  8 20:10 runpilot2-wrapper.sh
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:33:58] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:41 run_atlas
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:41 job.xml
[2026-01-09 09:33:58] -rw-r--r--. 2 boinc boinc 227049478 Jan  9 06:41 EVNT.47898824._000901.pool.root.1
[2026-01-09 09:33:58] -rw-r--r--. 2 boinc boinc    592390 Jan  9 06:41 input.tar.gz
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc      6391 Jan  9 06:41 init_data.xml
[2026-01-09 09:33:58] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:41 start_atlas.sh
[2026-01-09 09:33:58] drwxrwx--x. 2 boinc boinc        68 Jan  9 06:41 shared
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:41 boinc_lockfile
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc      2519 Jan  9 06:41 pandaJob.out
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc    989771 Jan  9 06:41 agis_schedconf.cvmfs.json
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc   1516240 Jan  9 06:41 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:33:58] drwx------. 5 boinc boinc      4096 Jan  9 06:41 pilot3
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc 219639339 Jan  9 09:32 HITS.47898826._031543.pool.root.1
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc       531 Jan  9 09:32 boinc_task_state.xml
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc      1015 Jan  9 09:33 memory_monitor_summary.json
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc    409240 Jan  9 09:33 log.47898826._031543.job.log.tgz.1
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc      7776 Jan  9 09:33 heartbeat.json
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:33 boinc_mmap_file
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc        28 Jan  9 09:33 wrapper_checkpoint.txt
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc        95 Jan  9 09:33 pilot_heartbeat.json
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc      4810 Jan  9 09:33 pilotlog.txt
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc   1375611 Jan  9 09:33 log.47898826._031543.job.log.1
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc       357 Jan  9 09:33 output.list
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:33 runtime_log
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc   1802240 Jan  9 09:33 result.tar.gz
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc      8833 Jan  9 09:33 runtime_log.err
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc       655 Jan  9 09:33 iDMNDmmZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm48fKDm6HdNen.diag
[2026-01-09 09:33:58] -rw-r--r--. 1 boinc boinc     20757 Jan  9 09:33 stderr.txt
[2026-01-09 09:33:58] HITS file was successfully produced:
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc 219639339 Jan  9 09:32 shared/HITS.pool.root.1
[2026-01-09 09:33:58]  *** Contents of shared directory: ***
[2026-01-09 09:33:58] total 438580
[2026-01-09 09:33:58] -rw-r--r--. 2 boinc boinc 227049478 Jan  9 06:41 ATLAS.root_0
[2026-01-09 09:33:58] -rw-r--r--. 2 boinc boinc    592390 Jan  9 06:41 input.tar.gz
[2026-01-09 09:33:58] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:41 start_atlas.sh
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc 219639339 Jan  9 09:32 HITS.pool.root.1
[2026-01-09 09:33:58] -rw-------. 1 boinc boinc   1802240 Jan  9 09:33 result.tar.gz
09:33:59 (9529): run_atlas exited; CPU time 77497.930395
09:33:59 (9529): called boinc_finish(0)

</stderr_txt>
]]>

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