Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:54:54 (2469015): wrapper (7.7.26015): starting
20:54:54 (2469015): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 20:54:54] Arguments: --nthreads 8
[2026-01-08 20:54:54] Threads: 8
[2026-01-08 20:54:54] Checking for CVMFS
[2026-01-08 20:54:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:54:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:54:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:54:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:54:56] 2.13.3.0 6428 20880 151852 154926 0 176 22283762 39288833 8338 16776704 0 8857339 99.644 9389400 37393 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 20:54:56] CVMFS is ok
[2026-01-08 20:54:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:54:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:54:56] Further information can be found at the LHC@home message board.
[2026-01-08 20:54:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:54:56] Checking for apptainer binary...
[2026-01-08 20:54:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:54:56] Running /usr/bin/apptainer --version
[2026-01-08 20:54:57] apptainer version 1.4.5-2.el9
[2026-01-08 20:54:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:54:57] c-211-3.aglt2.org
[2026-01-08 20:54:57] apptainer works
[2026-01-08 20:54:57] Set ATHENA_PROC_NUMBER=8
[2026-01-08 20:54:57] Set ATHENA_CORE_NUMBER=8
[2026-01-08 20:54:57] Starting ATLAS job with PandaID=6963156362
[2026-01-08 20:54:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:30:07]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:30:07] 2026-01-09 12:28:43,906 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 07:30:07] 2026-01-09 12:28:43,920 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.07725
[2026-01-09 07:30:07] 2026-01-09 12:28:43,943 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963156362/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:30:07] 2026-01-09 12:28:43,945 | INFO     | extracted standard info from prmon json
[2026-01-09 07:30:07] 2026-01-09 12:28:43,945 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:30:07] 2026-01-09 12:28:43,945 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:30:07] 2026-01-09 12:28:43,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:30:07] 2026-01-09 12:28:43,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:30:07] 2026-01-09 12:28:44,094 | INFO     | fitting pss+swap vs Time
[2026-01-09 07:30:07] 2026-01-09 12:28:44,095 | INFO     | sum of square deviations: 74255050856.25409
[2026-01-09 07:30:07] 2026-01-09 12:28:44,173 | INFO     | sum of deviations: -50141639024.49598
[2026-01-09 07:30:07] 2026-01-09 12:28:44,174 | INFO     | mean x: 1767942698.3075686
[2026-01-09 07:30:07] 2026-01-09 12:28:44,217 | INFO     | mean y: 2521692.552334944
[2026-01-09 07:30:07] 2026-01-09 12:28:44,217 | INFO     | intersect: 1196346807.1043267
[2026-01-09 07:30:07] 2026-01-09 12:28:44,218 | INFO     | chi2: 3.5514764416346116
[2026-01-09 07:30:07] 2026-01-09 12:28:44,219 | INFO     | sum of square deviations: 72475990727.63646
[2026-01-09 07:30:07] 2026-01-09 12:28:44,357 | INFO     | sum of deviations: 67200227031.54548
[2026-01-09 07:30:07] 2026-01-09 12:28:44,357 | INFO     | mean x: 1767942545.8181818
[2026-01-09 07:30:07] 2026-01-09 12:28:44,358 | INFO     | mean y: 2531716.951298701
[2026-01-09 07:30:07] 2026-01-09 12:28:44,358 | INFO     | intersect: -1636716526.0176282
[2026-01-09 07:30:07] 2026-01-09 12:28:44,359 | INFO     | chi2: 1.463105713123634
[2026-01-09 07:30:07] 2026-01-09 12:28:44,359 | INFO     | current chi2=1.463105713123634 (change=58.80288839955753 %)
[2026-01-09 07:30:07] 2026-01-09 12:28:44,360 | INFO     | sum of square deviations: 70725394547.12671
[2026-01-09 07:30:07] 2026-01-09 12:28:44,498 | INFO     | sum of deviations: 66085097202.53189
[2026-01-09 07:30:07] 2026-01-09 12:28:44,499 | INFO     | mean x: 1767942393.3207855
[2026-01-09 07:30:07] 2026-01-09 12:28:44,499 | INFO     | mean y: 2531619.8085106383
[2026-01-09 07:30:07] 2026-01-09 12:28:44,513 | INFO     | intersect: -1649415967.889005
[2026-01-09 07:30:07] 2026-01-09 12:28:44,514 | INFO     | chi2: 1.4631846373147348
[2026-01-09 07:30:07] 2026-01-09 12:28:44,514 | INFO     | current chi2=1.4631846373147348 (change=-0.005394291772142981 %)
[2026-01-09 07:30:07] 2026-01-09 12:28:44,514 | INFO     | right removable region: 610
[2026-01-09 07:30:07] 2026-01-09 12:28:44,515 | INFO     | sum of square deviations: 72475495407.63634
[2026-01-09 07:30:07] 2026-01-09 12:28:44,618 | INFO     | sum of deviations: -128584848976.36371
[2026-01-09 07:30:07] 2026-01-09 12:28:44,660 | INFO     | mean x: 1767942850.8181818
[2026-01-09 07:30:07] 2026-01-09 12:28:44,660 | INFO     | mean y: 2528383.6217532465
[2026-01-09 07:30:07] 2026-01-09 12:28:44,660 | INFO     | intersect: 3139183927.577445
[2026-01-09 07:30:07] 2026-01-09 12:28:44,661 | INFO     | chi2: 2.338229349169909
[2026-01-09 07:30:07] 2026-01-09 12:28:44,662 | INFO     | current chi2=2.338229349169909 (change=34.16176658928618 %)
[2026-01-09 07:30:07] 2026-01-09 12:28:44,662 | INFO     | sum of square deviations: 70724666448.18665
[2026-01-09 07:30:07] 2026-01-09 12:28:44,848 | INFO     | sum of deviations: -113871253314.36496
[2026-01-09 07:30:07] 2026-01-09 12:28:44,848 | INFO     | mean x: 1767943003.3256955
[2026-01-09 07:30:07] 2026-01-09 12:28:44,848 | INFO     | mean y: 2527097.564648118
[2026-01-09 07:30:07] 2026-01-09 12:28:44,848 | INFO     | intersect: 2849028830.090262
[2026-01-09 07:30:07] 2026-01-09 12:28:44,849 | INFO     | chi2: 2.3099262744970916
[2026-01-09 07:30:07] 2026-01-09 12:28:44,849 | INFO     | current chi2=2.3099262744970916 (change=1.210449038408712 %)
[2026-01-09 07:30:07] 2026-01-09 12:28:44,850 | INFO     | left removable region: 20
[2026-01-09 07:30:07] 2026-01-09 12:28:44,850 | INFO     | sum of square deviations: 63680172609.710304
[2026-01-09 07:30:07] 2026-01-09 12:28:45,007 | INFO     | sum of deviations: 64784708013.95249
[2026-01-09 07:30:07] 2026-01-09 12:28:45,007 | INFO     | mean x: 1767942972.8288136
[2026-01-09 07:30:07] 2026-01-09 12:28:45,007 | INFO     | mean y: 2531395.73220339
[2026-01-09 07:30:07] 2026-01-09 12:28:45,007 | INFO     | intersect: -1796076625.9830015
[2026-01-09 07:30:07] 2026-01-09 12:28:45,008 | INFO     | chi2: 0.004244845819834536
[2026-01-09 07:30:07] 2026-01-09 12:28:45,008 | INFO     | current memory leak: 1.02 B/s (using 590 data points, chi2=0.00)
[2026-01-09 07:30:07] 2026-01-09 12:28:45,009 | INFO     | could have reported an average CPU frequency of 2600 MHz (24 samples)
[2026-01-09 07:30:07] 2026-01-09 12:28:45,009 | INFO     | ..............................
[2026-01-09 07:30:07] 2026-01-09 12:28:45,010 | INFO     | . Timing measurements:
[2026-01-09 07:30:07] 2026-01-09 12:28:45,010 | INFO     | . get job = 0 s
[2026-01-09 07:30:07] 2026-01-09 12:28:45,010 | INFO     | . initial setup = 9 s
[2026-01-09 07:30:07] 2026-01-09 12:28:45,041 | INFO     | . payload setup = 18 s
[2026-01-09 07:30:07] 2026-01-09 12:28:45,041 | INFO     | . stage-in = 0 s
[2026-01-09 07:30:07] 2026-01-09 12:28:45,041 | INFO     | . payload execution = 37871 s
[2026-01-09 07:30:07] 2026-01-09 12:28:45,041 | INFO     | . stage-out = 14 s
[2026-01-09 07:30:07] 2026-01-09 12:28:45,042 | INFO     | . log creation = 4 s
[2026-01-09 07:30:07] 2026-01-09 12:28:45,042 | INFO     | ..............................
[2026-01-09 07:30:07] 2026-01-09 12:28:47,295 | INFO     | 
[2026-01-09 07:30:07] 2026-01-09 12:28:47,295 | INFO     | job summary report
[2026-01-09 07:30:07] 2026-01-09 12:28:47,295 | INFO     | --------------------------------------------------
[2026-01-09 07:30:07] 2026-01-09 12:28:47,296 | INFO     | PanDA job id: 6963156362
[2026-01-09 07:30:07] 2026-01-09 12:28:47,296 | INFO     | task id: 47898826
[2026-01-09 07:30:07] 2026-01-09 12:28:47,296 | INFO     | errors: (none)
[2026-01-09 07:30:07] 2026-01-09 12:28:47,296 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:30:07] 2026-01-09 12:28:47,296 | INFO     | pilot state: finished 
[2026-01-09 07:30:07] 2026-01-09 12:28:47,296 | INFO     | transexitcode: 0
[2026-01-09 07:30:07] 2026-01-09 12:28:47,296 | INFO     | exeerrorcode: 0
[2026-01-09 07:30:07] 2026-01-09 12:28:47,296 | INFO     | exeerrordiag: 
[2026-01-09 07:30:07] 2026-01-09 12:28:47,296 | INFO     | exitcode: 0
[2026-01-09 07:30:07] 2026-01-09 12:28:47,297 | INFO     | exitmsg: OK
[2026-01-09 07:30:07] 2026-01-09 12:28:47,297 | INFO     | cpuconsumptiontime: 67205 s
[2026-01-09 07:30:07] 2026-01-09 12:28:47,297 | INFO     | nevents: 400
[2026-01-09 07:30:07] 2026-01-09 12:28:47,297 | INFO     | neventsw: 0
[2026-01-09 07:30:07] 2026-01-09 12:28:47,297 | INFO     | pid: 2481235
[2026-01-09 07:30:07] 2026-01-09 12:28:47,297 | INFO     | pgrp: 2481235
[2026-01-09 07:30:07] 2026-01-09 12:28:47,297 | INFO     | corecount: 8
[2026-01-09 07:30:07] 2026-01-09 12:28:47,297 | INFO     | event service: False
[2026-01-09 07:30:07] 2026-01-09 12:28:47,297 | INFO     | sizes: {0: 2283968, 1: 2283968, 12: 2283996, 16: 2284286, 23: 2284314, 37895: 2326219, 37910: 2335217, 37912: 2335273, 37967: 2335467}
[2026-01-09 07:30:07] 2026-01-09 12:28:47,297 | INFO     | --------------------------------------------------
[2026-01-09 07:30:07] 2026-01-09 12:28:47,298 | INFO     | 
[2026-01-09 07:30:07] 2026-01-09 12:28:47,298 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 07:30:07] 2026-01-09 12:28:47,549 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,550 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,550 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,550 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,551 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:30:07] 2026-01-09 12:28:47,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,551 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:30:07] 2026-01-09 12:28:47,552 | INFO     | job 6963156362 has completed (purged errors)
[2026-01-09 07:30:07] 2026-01-09 12:28:47,552 | INFO     | overall cleanup function is called
[2026-01-09 07:30:07] 2026-01-09 12:28:48,677 | INFO     | --- collectZombieJob: --- 10, [2481235]
[2026-01-09 07:30:07] 2026-01-09 12:28:48,677 | INFO     | zombie collector waiting for pid 2481235
[2026-01-09 07:30:07] 2026-01-09 12:28:48,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:30:07] 2026-01-09 12:28:48,677 | INFO     | collected zombie processes
[2026-01-09 07:30:07] 2026-01-09 12:28:48,677 | INFO     | will attempt to kill all subprocesses of pid=2481235
[2026-01-09 07:30:07] 2026-01-09 12:28:50,296 | INFO     | PID=2473188 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:30:07] 2026-01-09 12:28:50,296 | INFO     | .. there are 7 such processes running
[2026-01-09 07:30:07] 2026-01-09 12:28:51,344 | INFO     | process IDs to be killed: [2481235] (in reverse order)
[2026-01-09 07:30:07] 2026-01-09 12:28:52,761 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:30:07] 2026-01-09 12:28:52,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:30:07] 2026-01-09 12:28:52,857 | INFO     | did not find any defunct processes belonging to 2481235
[2026-01-09 07:30:07] 2026-01-09 12:28:52,964 | INFO     | did not find any defunct processes belonging to 2481235
[2026-01-09 07:30:07] 2026-01-09 12:28:52,965 | INFO     | ready for new job
[2026-01-09 07:30:07] 2026-01-09 12:28:52,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:30:07] 2026-01-09 12:28:53,019 | INFO     | ***************************************
[2026-01-09 07:30:07] 2026-01-09 12:28:53,020 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:30:07] 2026-01-09 12:28:53,020 | INFO     | ***************************************
[2026-01-09 07:30:07] 2026-01-09 12:28:53,020 | INFO     | 
[2026-01-09 07:30:07] 2026-01-09 12:28:53,022 | INFO     | architecture information:
[2026-01-09 07:30:07] 2026-01-09 12:28:53,049 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:30:07] 2026-01-09 12:28:53,108 | INFO     | cat /etc/os-release:
[2026-01-09 07:30:07] NAME="CentOS Linux"
[2026-01-09 07:30:07] VERSION="7 (Core)"
[2026-01-09 07:30:07] ID="centos"
[2026-01-09 07:30:07] ID_LIKE="rhel fedora"
[2026-01-09 07:30:07] VERSION_ID="7"
[2026-01-09 07:30:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:30:07] ANSI_COLOR="0;31"
[2026-01-09 07:30:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:30:07] HOME_URL="https://www.centos.org/"
[2026-01-09 07:30:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:30:07] 
[2026-01-09 07:30:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:30:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:30:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:30:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:30:07] 
[2026-01-09 07:30:07] 2026-01-09 12:28:53,109 | INFO     | ***************************************
[2026-01-09 07:30:07] 2026-01-09 12:28:53,612 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 07:30:07] 2026-01-09 12:28:53,914 | INFO     | sufficient remaining disk space (52875493376 B)
[2026-01-09 07:30:07] 2026-01-09 12:28:53,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:30:07] 2026-01-09 12:28:53,915 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:30:07] 2026-01-09 12:28:53,915 | INFO     | update_server=False
[2026-01-09 07:30:07] 2026-01-09 12:28:53,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:30:07] 2026-01-09 12:28:53,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:30:07] 2026-01-09 12:28:54,186 | INFO     | all job control threads have been joined
[2026-01-09 07:30:07] 2026-01-09 12:28:54,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:30:07] 2026-01-09 12:28:54,247 | INFO     | aborting loop
[2026-01-09 07:30:07] 2026-01-09 12:28:54,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:30:07] 2026-01-09 12:28:54,795 | INFO     | all data control threads have been joined
[2026-01-09 07:30:07] 2026-01-09 12:28:54,921 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:54,959 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:55,192 | INFO     | [job] control thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:55,253 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:55,374 | INFO     | all payload control threads have been joined
[2026-01-09 07:30:07] 2026-01-09 12:28:55,454 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:55,551 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:55,733 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:55,746 | INFO     | [job] validate thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:55,801 | INFO     | [data] control thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:55,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:30:07] 2026-01-09 12:28:55,903 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:56,212 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:56,279 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:56,380 | INFO     | [payload] control thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:56,463 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:56,884 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:28:57,924 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:30:07] 2026-01-09 12:29:23,333 | INFO     | PID=2473188 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:30:07] 2026-01-09 12:29:23,333 | INFO     | .. there are 7 such processes running
[2026-01-09 07:30:07] 2026-01-09 12:29:23,334 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:30:07] 2026-01-09 12:29:23,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:30:07] 2026-01-09 12:29:23,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:30:07] 2026-01-09 12:29:35,989 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:30:07] 2026-01-09 12:29:37,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945126790976)>', '<ExcThread(monitor, started 139944764880640)>']
[2026-01-09 07:30:07] 2026-01-09 12:29:38,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:30:07] 2026-01-09 12:29:38,533 | INFO     | [monitor] control thread has ended
[2026-01-09 07:30:07] 2026-01-09 12:29:42,611 | INFO     | all workflow threads have been joined
[2026-01-09 07:30:07] 2026-01-09 12:29:42,611 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:30:07] 2026-01-09 12:29:42,611 | INFO     | traces error code: 0
[2026-01-09 07:30:07] 2026-01-09 12:29:42,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:30:07] 2026-01-09 12:29:45,114 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:30:07] 2026-01-09 12:29:45,188 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:30:07] 2026-01-09 12:29:45,244 [wrapper] pilotpid: 2473188
[2026-01-09 07:30:07] 2026-01-09 12:29:45,299 [wrapper] Pilot exit status: 0
[2026-01-09 07:30:07] 2026-01-09 12:29:45,517 [wrapper] pandaids: 6963156362
[2026-01-09 07:30:07] 2026-01-09 12:29:46,183 [wrapper] cleanup supervisor_pilot 3456053 2473189
[2026-01-09 07:30:07] 2026-01-09 12:29:46,195 [wrapper] Test setup, not cleaning
[2026-01-09 07:30:07] 2026-01-09 12:29:46,252 [wrapper] apfmon messages muted
[2026-01-09 07:30:07] 2026-01-09 12:29:46,268 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:30:07] 2026-01-09 12:29:46,286 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:30:07]  *** Error codes and diagnostics ***
[2026-01-09 07:30:07]     "exeErrorCode": 0,
[2026-01-09 07:30:07]     "exeErrorDiag": "",
[2026-01-09 07:30:07]     "pilotErrorCode": 0,
[2026-01-09 07:30:07]     "pilotErrorDiag": "",
[2026-01-09 07:30:07]  *** Listing of results directory ***
[2026-01-09 07:30:07] total 450960
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 07:30:07] -rwx------. 1 boincer umatlas     36322 Jan  8 14:10 runpilot2-wrapper.sh
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:11 queuedata.json
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas       100 Jan  8 20:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:30:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 20:54 run_atlas
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas       105 Jan  8 20:54 job.xml
[2026-01-09 07:30:07] -rw-r--r--. 2 boincer umatlas 227049478 Jan  8 20:54 EVNT.47898824._000901.pool.root.1
[2026-01-09 07:30:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:54 start_atlas.sh
[2026-01-09 07:30:07] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 20:54 shared
[2026-01-09 07:30:07] -rw-r--r--. 2 boincer umatlas    592400 Jan  8 20:54 input.tar.gz
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas         0 Jan  8 20:54 boinc_lockfile
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 20:54 pandaJob.out
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas        57 Jan  8 20:54 setup.sh.local
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas    989821 Jan  8 20:55 agis_schedconf.cvmfs.json
[2026-01-09 07:30:07] drwx------. 5 boincer umatlas      4096 Jan  8 20:55 pilot3
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas 219838467 Jan  9 07:23 HITS.47898826._031539.pool.root.1
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas       531 Jan  9 07:23 boinc_task_state.xml
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas      1042 Jan  9 07:27 memory_monitor_summary.json
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas      6657 Jan  9 07:27 init_data.xml
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas   1516240 Jan  9 07:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas    760169 Jan  9 07:27 log.47898826._031539.job.log.tgz.1
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas      7822 Jan  9 07:28 heartbeat.json
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas        95 Jan  9 07:29 pilot_heartbeat.json
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas      4823 Jan  9 07:29 pilotlog.txt
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas   4728955 Jan  9 07:29 log.47898826._031539.job.log.1
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas       357 Jan  9 07:29 output.list
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas       620 Jan  9 07:29 runtime_log
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas   5509120 Jan  9 07:29 result.tar.gz
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas       657 Jan  9 07:29 z79MDmmZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm08fKDmGAbR6m.diag
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 07:29 runtime_log.err
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas        28 Jan  9 07:30 wrapper_checkpoint.txt
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 07:30 boinc_mmap_file
[2026-01-09 07:30:07] -rw-r--r--. 1 boincer umatlas     20959 Jan  9 07:30 stderr.txt
[2026-01-09 07:30:07] HITS file was successfully produced:
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas 219838467 Jan  9 07:23 shared/HITS.pool.root.1
[2026-01-09 07:30:07]  *** Contents of shared directory: ***
[2026-01-09 07:30:07] total 442400
[2026-01-09 07:30:07] -rw-r--r--. 2 boincer umatlas 227049478 Jan  8 20:54 ATLAS.root_0
[2026-01-09 07:30:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:54 start_atlas.sh
[2026-01-09 07:30:07] -rw-r--r--. 2 boincer umatlas    592400 Jan  8 20:54 input.tar.gz
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas 219838467 Jan  9 07:23 HITS.pool.root.1
[2026-01-09 07:30:07] -rw-------. 1 boincer umatlas   5509120 Jan  9 07:29 result.tar.gz
07:30:09 (2469015): run_atlas exited; CPU time 68070.490748
07:30:09 (2469015): called boinc_finish(0)

</stderr_txt>
]]>

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