Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:59:49 (4054337): wrapper (7.7.26015): starting
21:59:49 (4054337): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 21:59:49] Arguments: --nthreads 8
[2026-01-08 21:59:49] Threads: 8
[2026-01-08 21:59:49] Checking for CVMFS
[2026-01-08 21:59:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:59:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:59:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:59:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:59:51] 2.13.3.0 9702 92844 339592 154927 3 426 28727172 32935936 23802 16776704 0 431494738 99.692 328401004 32399 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 21:59:51] CVMFS is ok
[2026-01-08 21:59:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 21:59:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 21:59:52] Further information can be found at the LHC@home message board.
[2026-01-08 21:59:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:59:52] Checking for apptainer binary...
[2026-01-08 21:59:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:59:52] Running /usr/bin/apptainer --version
[2026-01-08 21:59:52] apptainer version 1.4.5-2.el9
[2026-01-08 21:59:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:59:53] c-4-37.aglt2.org
[2026-01-08 21:59:53] apptainer works
[2026-01-08 21:59:53] Set ATHENA_PROC_NUMBER=8
[2026-01-08 21:59:53] Set ATHENA_CORE_NUMBER=8
[2026-01-08 21:59:53] Starting ATLAS job with PandaID=6963156346
[2026-01-08 21:59:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:34:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:34:19] 2026-01-10 00:33:04,155 | INFO     | sum of square deviations: 630677291027.1782
[2026-01-09 19:34:19] 2026-01-10 00:33:04,540 | INFO     | sum of deviations: -482335581415.74493
[2026-01-09 19:34:19] 2026-01-10 00:33:04,540 | INFO     | mean x: 1767966455.2525651
[2026-01-09 19:34:19] 2026-01-10 00:33:04,540 | INFO     | mean y: 2492973.536700868
[2026-01-09 19:34:19] 2026-01-10 00:33:04,540 | INFO     | intersect: 1354615747.3389866
[2026-01-09 19:34:19] 2026-01-10 00:33:04,542 | INFO     | chi2: 11.218691354412234
[2026-01-09 19:34:19] 2026-01-10 00:33:04,673 | INFO     | sum of square deviations: 623240912185.7297
[2026-01-09 19:34:19] 2026-01-10 00:33:05,121 | INFO     | sum of deviations: -85069076422.80359
[2026-01-09 19:34:19] 2026-01-10 00:33:05,121 | INFO     | mean x: 1767966302.7606974
[2026-01-09 19:34:19] 2026-01-10 00:33:05,122 | INFO     | mean y: 2501120.003961965
[2026-01-09 19:34:19] 2026-01-10 00:33:05,122 | INFO     | intersect: 243819136.1705119
[2026-01-09 19:34:19] 2026-01-10 00:33:05,133 | INFO     | chi2: 7.709408607587216
[2026-01-09 19:34:19] 2026-01-10 00:33:05,134 | INFO     | current chi2=7.709408607587216 (change=31.280678253483117 %)
[2026-01-09 19:34:19] 2026-01-10 00:33:05,136 | INFO     | sum of square deviations: 615863078406.1859
[2026-01-09 19:34:19] 2026-01-10 00:33:05,288 | INFO     | sum of deviations: 320481299185.7593
[2026-01-09 19:34:19] 2026-01-10 00:33:05,288 | INFO     | mean x: 1767966150.267303
[2026-01-09 19:34:19] 2026-01-10 00:33:05,288 | INFO     | mean y: 2509502.8846459826
[2026-01-09 19:34:19] 2026-01-10 00:33:05,288 | INFO     | intersect: -917500331.4772956
[2026-01-09 19:34:19] 2026-01-10 00:33:05,290 | INFO     | chi2: 4.122722581912554
[2026-01-09 19:34:19] 2026-01-10 00:33:05,290 | INFO     | current chi2=4.122722581912554 (change=46.523491077445605 %)
[2026-01-09 19:34:19] 2026-01-10 00:33:05,292 | INFO     | sum of square deviations: 608543404255.2102
[2026-01-09 19:34:19] 2026-01-10 00:33:05,377 | INFO     | sum of deviations: 406398089412.84045
[2026-01-09 19:34:19] 2026-01-10 00:33:05,377 | INFO     | mean x: 1767965997.7707667
[2026-01-09 19:34:19] 2026-01-10 00:33:05,378 | INFO     | mean y: 2511287.0830670926
[2026-01-09 19:34:19] 2026-01-10 00:33:05,378 | INFO     | intersect: -1178173605.0985641
[2026-01-09 19:34:19] 2026-01-10 00:33:05,380 | INFO     | chi2: 3.297031662997789
[2026-01-09 19:34:19] 2026-01-10 00:33:05,380 | INFO     | current chi2=3.297031662997789 (change=20.02780692878254 %)
[2026-01-09 19:34:19] 2026-01-10 00:33:05,380 | INFO     | right removable region: 1251
[2026-01-09 19:34:19] 2026-01-10 00:33:05,382 | INFO     | sum of square deviations: 623239248529.2089
[2026-01-09 19:34:19] 2026-01-10 00:33:05,576 | INFO     | monitor loop #3070: job 0:6963156346 is in state 'finished'
[2026-01-09 19:34:19] 2026-01-10 00:33:05,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:34:19] 2026-01-10 00:33:05,914 | INFO     | sum of deviations: -838650967914.2659
[2026-01-09 19:34:19] 2026-01-10 00:33:05,914 | INFO     | mean x: 1767966607.7614896
[2026-01-09 19:34:19] 2026-01-10 00:33:05,914 | INFO     | mean y: 2500275.673534073
[2026-01-09 19:34:19] 2026-01-10 00:33:05,915 | INFO     | intersect: 2381533544.740486
[2026-01-09 19:34:19] 2026-01-10 00:33:06,026 | INFO     | chi2: 8.358248839091797
[2026-01-09 19:34:19] 2026-01-10 00:33:06,027 | INFO     | current chi2=8.358248839091797 (change=25.497113923144386 %)
[2026-01-09 19:34:19] 2026-01-10 00:33:06,051 | INFO     | sum of square deviations: 615860212626.1863
[2026-01-09 19:34:19] 2026-01-10 00:33:06,524 | INFO     | sum of deviations: -922120006199.5415
[2026-01-09 19:34:19] 2026-01-10 00:33:06,524 | INFO     | mean x: 1767966760.267303
[2026-01-09 19:34:19] 2026-01-10 00:33:06,525 | INFO     | mean y: 2501998.427207637
[2026-01-09 19:34:19] 2026-01-10 00:33:06,525 | INFO     | intersect: 2649657126.3520107
[2026-01-09 19:34:19] 2026-01-10 00:33:06,527 | INFO     | chi2: 8.12506575309649
[2026-01-09 19:34:19] 2026-01-10 00:33:06,527 | INFO     | current chi2=8.12506575309649 (change=2.7898557518974845 %)
[2026-01-09 19:34:19] 2026-01-10 00:33:06,527 | INFO     | left removable region: 20
[2026-01-09 19:34:19] 2026-01-10 00:33:06,529 | INFO     | sum of square deviations: 578429966060.7892
[2026-01-09 19:34:19] 2026-01-10 00:33:06,673 | INFO     | sum of deviations: -88274894293.94296
[2026-01-09 19:34:19] 2026-01-10 00:33:06,674 | INFO     | mean x: 1767966577.3005686
[2026-01-09 19:34:19] 2026-01-10 00:33:06,674 | INFO     | mean y: 2521711.9187652315
[2026-01-09 19:34:19] 2026-01-10 00:33:06,674 | INFO     | intersect: 272333222.1855591
[2026-01-09 19:34:19] 2026-01-10 00:33:06,676 | INFO     | chi2: 0.07589934112027943
[2026-01-09 19:34:19] 2026-01-10 00:33:06,676 | INFO     | current memory leak: -0.15 B/s (using 1231 data points, chi2=0.08)
[2026-01-09 19:34:19] 2026-01-10 00:33:06,682 | INFO     | could have reported an average CPU frequency of 2599 MHz (45 samples)
[2026-01-09 19:34:19] 2026-01-10 00:33:06,682 | INFO     | ..............................
[2026-01-09 19:34:19] 2026-01-10 00:33:06,682 | INFO     | . Timing measurements:
[2026-01-09 19:34:19] 2026-01-10 00:33:06,682 | INFO     | . get job = 0 s
[2026-01-09 19:34:19] 2026-01-10 00:33:06,682 | INFO     | . initial setup = 8 s
[2026-01-09 19:34:19] 2026-01-10 00:33:06,683 | INFO     | . payload setup = 43 s
[2026-01-09 19:34:19] 2026-01-10 00:33:06,683 | INFO     | . stage-in = 0 s
[2026-01-09 19:34:19] 2026-01-10 00:33:06,683 | INFO     | . payload execution = 77293 s
[2026-01-09 19:34:19] 2026-01-10 00:33:06,683 | INFO     | . stage-out = 11 s
[2026-01-09 19:34:19] 2026-01-10 00:33:06,683 | INFO     | . log creation = 3 s
[2026-01-09 19:34:19] 2026-01-10 00:33:06,683 | INFO     | ..............................
[2026-01-09 19:34:19] 2026-01-10 00:33:07,395 | INFO     | 
[2026-01-09 19:34:19] 2026-01-10 00:33:07,395 | INFO     | job summary report
[2026-01-09 19:34:19] 2026-01-10 00:33:07,395 | INFO     | --------------------------------------------------
[2026-01-09 19:34:19] 2026-01-10 00:33:07,395 | INFO     | PanDA job id: 6963156346
[2026-01-09 19:34:19] 2026-01-10 00:33:07,395 | INFO     | task id: 47898826
[2026-01-09 19:34:19] 2026-01-10 00:33:07,395 | INFO     | errors: (none)
[2026-01-09 19:34:19] 2026-01-10 00:33:07,395 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:34:19] 2026-01-10 00:33:07,395 | INFO     | pilot state: finished 
[2026-01-09 19:34:19] 2026-01-10 00:33:07,396 | INFO     | transexitcode: 0
[2026-01-09 19:34:19] 2026-01-10 00:33:07,396 | INFO     | exeerrorcode: 0
[2026-01-09 19:34:19] 2026-01-10 00:33:07,396 | INFO     | exeerrordiag: 
[2026-01-09 19:34:19] 2026-01-10 00:33:07,411 | INFO     | exitcode: 0
[2026-01-09 19:34:19] 2026-01-10 00:33:07,411 | INFO     | exitmsg: OK
[2026-01-09 19:34:19] 2026-01-10 00:33:07,411 | INFO     | cpuconsumptiontime: 69030 s
[2026-01-09 19:34:19] 2026-01-10 00:33:07,411 | INFO     | nevents: 400
[2026-01-09 19:34:19] 2026-01-10 00:33:07,411 | INFO     | neventsw: 0
[2026-01-09 19:34:19] 2026-01-10 00:33:07,412 | INFO     | pid: 4079229
[2026-01-09 19:34:19] 2026-01-10 00:33:07,412 | INFO     | pgrp: 4079229
[2026-01-09 19:34:19] 2026-01-10 00:33:07,412 | INFO     | corecount: 8
[2026-01-09 19:34:19] 2026-01-10 00:33:07,412 | INFO     | event service: False
[2026-01-09 19:34:19] 2026-01-10 00:33:07,412 | INFO     | sizes: {0: 2283742, 1: 2283798, 2: 2283854, 3: 2284025, 4: 2284053, 15: 2284081, 27: 2284237, 39: 2284265, 41: 2284555, 51: 2284583, 77344: 2340174, 77346: 2340453
[2026-01-09 19:34:19] 2026-01-10 00:33:07,412 | INFO     | --------------------------------------------------
[2026-01-09 19:34:19] 2026-01-10 00:33:07,412 | INFO     | 
[2026-01-09 19:34:19] 2026-01-10 00:33:07,412 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 19:34:19] 2026-01-10 00:33:07,796 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,796 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,796 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,796 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,797 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,797 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,798 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:34:19] 2026-01-10 00:33:07,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,798 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:34:19] 2026-01-10 00:33:07,798 | INFO     | job 6963156346 has completed (purged errors)
[2026-01-09 19:34:19] 2026-01-10 00:33:07,798 | INFO     | overall cleanup function is called
[2026-01-09 19:34:19] 2026-01-10 00:33:08,852 | INFO     | --- collectZombieJob: --- 10, [4079229]
[2026-01-09 19:34:19] 2026-01-10 00:33:08,889 | INFO     | zombie collector waiting for pid 4079229
[2026-01-09 19:34:19] 2026-01-10 00:33:08,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:34:19] 2026-01-10 00:33:08,889 | INFO     | collected zombie processes
[2026-01-09 19:34:19] 2026-01-10 00:33:08,889 | INFO     | will attempt to kill all subprocesses of pid=4079229
[2026-01-09 19:34:19] 2026-01-10 00:33:13,606 | INFO     | PID=4062344 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:34:19] 2026-01-10 00:33:13,606 | INFO     | .. there are 41 such processes running
[2026-01-09 19:34:19] 2026-01-10 00:33:15,162 | INFO     | process IDs to be killed: [4079229] (in reverse order)
[2026-01-09 19:34:19] 2026-01-10 00:33:21,206 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:34:19] 2026-01-10 00:33:21,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:34:19] 2026-01-10 00:33:21,246 | INFO     | did not find any defunct processes belonging to 4079229
[2026-01-09 19:34:19] 2026-01-10 00:33:21,471 | INFO     | did not find any defunct processes belonging to 4079229
[2026-01-09 19:34:19] 2026-01-10 00:33:21,471 | INFO     | ready for new job
[2026-01-09 19:34:19] 2026-01-10 00:33:21,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:34:19] 2026-01-10 00:33:21,555 | INFO     | ***************************************
[2026-01-09 19:34:19] 2026-01-10 00:33:21,555 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:34:19] 2026-01-10 00:33:21,555 | INFO     | ***************************************
[2026-01-09 19:34:19] 2026-01-10 00:33:21,555 | INFO     | 
[2026-01-09 19:34:19] 2026-01-10 00:33:21,574 | INFO     | architecture information:
[2026-01-09 19:34:19] 2026-01-10 00:33:21,599 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:34:19] 2026-01-10 00:33:21,921 | INFO     | cat /etc/os-release:
[2026-01-09 19:34:19] NAME="CentOS Linux"
[2026-01-09 19:34:19] VERSION="7 (Core)"
[2026-01-09 19:34:19] ID="centos"
[2026-01-09 19:34:19] ID_LIKE="rhel fedora"
[2026-01-09 19:34:19] VERSION_ID="7"
[2026-01-09 19:34:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:34:19] ANSI_COLOR="0;31"
[2026-01-09 19:34:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:34:19] HOME_URL="https://www.centos.org/"
[2026-01-09 19:34:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:34:19] 
[2026-01-09 19:34:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:34:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:34:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:34:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:34:19] 
[2026-01-09 19:34:19] 2026-01-10 00:33:21,921 | INFO     | ***************************************
[2026-01-09 19:34:19] 2026-01-10 00:33:22,525 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 19:34:19] 2026-01-10 00:33:22,808 | INFO     | sufficient remaining disk space (73881616384 B)
[2026-01-09 19:34:19] 2026-01-10 00:33:22,809 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:34:19] 2026-01-10 00:33:22,809 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:34:19] 2026-01-10 00:33:22,809 | INFO     | update_server=False
[2026-01-09 19:34:19] 2026-01-10 00:33:22,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:34:19] 2026-01-10 00:33:22,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:34:19] 2026-01-10 00:33:22,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:34:19] 2026-01-10 00:33:22,823 | INFO     | aborting loop
[2026-01-09 19:34:19] 2026-01-10 00:33:23,159 | INFO     | all payload control threads have been joined
[2026-01-09 19:34:19] 2026-01-10 00:33:23,381 | INFO     | all job control threads have been joined
[2026-01-09 19:34:19] 2026-01-10 00:33:23,592 | INFO     | all data control threads have been joined
[2026-01-09 19:34:19] 2026-01-10 00:33:23,819 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:23,833 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:24,068 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:24,068 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:24,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:34:19] 2026-01-10 00:33:24,165 | INFO     | [payload] control thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:24,387 | INFO     | [job] control thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:24,612 | INFO     | [data] control thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:24,653 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:24,662 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:24,670 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:24,812 | INFO     | [job] validate thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:24,983 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:25,136 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:25,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:34:19] 2026-01-10 00:33:26,110 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:26,289 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:26,849 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:34:19] 2026-01-10 00:33:50,119 | INFO     | PID=4062344 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:34:19] 2026-01-10 00:33:50,119 | INFO     | .. there are 41 such processes running
[2026-01-09 19:34:19] 2026-01-10 00:33:50,122 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:34:19] 2026-01-10 00:33:50,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:34:19] 2026-01-10 00:33:50,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:34:19] 2026-01-10 00:34:08,999 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:34:19] 2026-01-10 00:34:09,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914318194496)>', '<ExcThread(monitor, started 139913961912064)>']
[2026-01-09 19:34:19] 2026-01-10 00:34:09,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:34:19] 2026-01-10 00:34:09,351 | INFO     | [monitor] control thread has ended
[2026-01-09 19:34:19] 2026-01-10 00:34:14,166 | INFO     | all workflow threads have been joined
[2026-01-09 19:34:19] 2026-01-10 00:34:14,167 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:34:19] 2026-01-10 00:34:14,167 | INFO     | traces error code: 0
[2026-01-09 19:34:19] 2026-01-10 00:34:14,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:34:19] 2026-01-10 00:34:17,960 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:34:19] 2026-01-10 00:34:17,976 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:34:19] 2026-01-10 00:34:18,026 [wrapper] pilotpid: 4062344
[2026-01-09 19:34:19] 2026-01-10 00:34:18,045 [wrapper] Pilot exit status: 0
[2026-01-09 19:34:19] 2026-01-10 00:34:18,294 [wrapper] pandaids: 6963156346
[2026-01-09 19:34:19] 2026-01-10 00:34:18,440 [wrapper] cleanup supervisor_pilot 2413989 4062345
[2026-01-09 19:34:19] 2026-01-10 00:34:18,493 [wrapper] Test setup, not cleaning
[2026-01-09 19:34:19] 2026-01-10 00:34:18,582 [wrapper] apfmon messages muted
[2026-01-09 19:34:19] 2026-01-10 00:34:18,628 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:34:19] 2026-01-10 00:34:18,671 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:34:19]  *** Error codes and diagnostics ***
[2026-01-09 19:34:19]     "exeErrorCode": 0,
[2026-01-09 19:34:19]     "exeErrorDiag": "",
[2026-01-09 19:34:19]     "pilotErrorCode": 0,
[2026-01-09 19:34:19]     "pilotErrorDiag": "",
[2026-01-09 19:34:19]  *** Listing of results directory ***
[2026-01-09 19:34:19] total 454776
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 19:34:19] -rwx------. 1 boincer umatlas     36322 Jan  8 14:10 runpilot2-wrapper.sh
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:11 queuedata.json
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas       100 Jan  8 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:34:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 21:59 run_atlas
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas       105 Jan  8 21:59 job.xml
[2026-01-09 19:34:19] -rw-r--r--. 2 boincer umatlas 225653036 Jan  8 21:59 EVNT.47898824._000900.pool.root.1
[2026-01-09 19:34:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 21:59 start_atlas.sh
[2026-01-09 19:34:19] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 21:59 shared
[2026-01-09 19:34:19] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 21:59 input.tar.gz
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas         0 Jan  8 21:59 boinc_lockfile
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 21:59 pandaJob.out
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas        57 Jan  8 21:59 setup.sh.local
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas    989763 Jan  8 22:01 agis_schedconf.cvmfs.json
[2026-01-09 19:34:19] drwx------. 5 boincer umatlas      4096 Jan  8 22:01 pilot3
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas 219041880 Jan  9 19:20 HITS.47898826._031523.pool.root.1
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas       531 Jan  9 19:20 boinc_task_state.xml
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas      6660 Jan  9 19:27 init_data.xml
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas      1055 Jan  9 19:31 memory_monitor_summary.json
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:31 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas   1108969 Jan  9 19:31 log.47898826._031523.job.log.tgz.1
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas      7846 Jan  9 19:33 heartbeat.json
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas        95 Jan  9 19:33 pilot_heartbeat.json
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas      4824 Jan  9 19:34 pilotlog.txt
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:34 boinc_mmap_file
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas        28 Jan  9 19:34 wrapper_checkpoint.txt
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas   7437071 Jan  9 19:34 log.47898826._031523.job.log.1
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas       357 Jan  9 19:34 output.list
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:34 runtime_log
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas   8560640 Jan  9 19:34 result.tar.gz
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas      9333 Jan  9 19:34 runtime_log.err
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas       660 Jan  9 19:34 r8mMDmmZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDml8fKDmN9swmn.diag
[2026-01-09 19:34:19] -rw-r--r--. 1 boincer umatlas     13923 Jan  9 19:34 stderr.txt
[2026-01-09 19:34:19] HITS file was successfully produced:
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas 219041880 Jan  9 19:20 shared/HITS.pool.root.1
[2026-01-09 19:34:19]  *** Contents of shared directory: ***
[2026-01-09 19:34:19] total 443240
[2026-01-09 19:34:19] -rw-r--r--. 2 boincer umatlas 225653036 Jan  8 21:59 ATLAS.root_0
[2026-01-09 19:34:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 21:59 start_atlas.sh
[2026-01-09 19:34:19] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 21:59 input.tar.gz
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas 219041880 Jan  9 19:20 HITS.pool.root.1
[2026-01-09 19:34:19] -rw-------. 1 boincer umatlas   8560640 Jan  9 19:34 result.tar.gz
19:34:21 (4054337): run_atlas exited; CPU time 72014.528185
19:34:21 (4054337): called boinc_finish(0)

</stderr_txt>
]]>

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