Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:30:30 (20126): wrapper (7.7.26015): starting
20:30:30 (20126): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 20:30:30] Arguments: --nthreads 12
[2026-01-08 20:30:30] Threads: 12
[2026-01-08 20:30:30] Checking for CVMFS
[2026-01-08 20:30:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:30:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:30:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:30:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:30:31] 2.11.2.0 3081 350337 97752 154926 2 56 10177491 20275200 1 130560 1 148234214 99.955 20152746 16091 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 20:30:31] CVMFS is ok
[2026-01-08 20:30:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:30:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:30:31] Further information can be found at the LHC@home message board.
[2026-01-08 20:30:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:30:31] Checking for apptainer binary...
[2026-01-08 20:30:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:30:31] Running /usr/bin/apptainer --version
[2026-01-08 20:30:31] apptainer version 1.3.2-1.el7
[2026-01-08 20:30:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:30:32] c-205-29.aglt2.org
[2026-01-08 20:30:32] apptainer works
[2026-01-08 20:30:32] Set ATHENA_PROC_NUMBER=12
[2026-01-08 20:30:32] Set ATHENA_CORE_NUMBER=12
[2026-01-08 20:30:32] Starting ATLAS job with PandaID=6963156446
[2026-01-08 20:30:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 22:12:27]  *** The last 200 lines of the pilot log: ***
[2026-01-08 22:12:27]  is_tar=False
[2026-01-08 22:12:27]  lfn=log.47898826._031616.job.log.tgz.1
[2026-01-08 22:12:27]  mtime=0
[2026-01-08 22:12:27]  protocol_id=None
[2026-01-08 22:12:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-08 22:12:27]  replicas=None
[2026-01-08 22:12:27]  scope=mc23_13p6TeV
[2026-01-08 22:12:27]  status=None
[2026-01-08 22:12:27]  status_code=0
[2026-01-08 22:12:27]  storage_token=
[2026-01-08 22:12:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963156446/log.47898826._031616.job.log.tgz.1
[2026-01-08 22:12:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/d7/log.47898826._031616.job.log.tgz.1
[2026-01-08 22:12:27]  workdir=None
[2026-01-08 22:12:27] ]
[2026-01-08 22:12:27] 2026-01-09 03:11:48,380 | INFO     | transferring file log.47898826._031616.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963156446/log.47898826._031616.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-08 22:12:27] 2026-01-09 03:11:48,380 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963156446/log.47898826._031616.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._031616.job
[2026-01-08 22:12:27] 2026-01-09 03:11:48,404 | INFO     | adding to output.list: log.47898826._031616.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/d7/log.47898826._031616.job.log.tg
[2026-01-08 22:12:27] 2026-01-09 03:11:48,405 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 22:12:27] 2026-01-09 03:11:48,405 | INFO     | summary of transferred files:
[2026-01-08 22:12:27] 2026-01-09 03:11:48,405 | INFO     |  -- lfn=log.47898826._031616.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 22:12:27] 2026-01-09 03:11:48,405 | INFO     | stage-out finished correctly
[2026-01-08 22:12:27] 2026-01-09 03:11:48,593 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 22:12:27] 2026-01-09 03:11:48,676 | INFO     | job 6963156446 has state=finished
[2026-01-08 22:12:27] 2026-01-09 03:11:48,676 | INFO     | preparing for final server update for job 6963156446 in state='finished'
[2026-01-08 22:12:27] 2026-01-09 03:11:48,677 | INFO     | this job has now completed (state=finished)
[2026-01-08 22:12:27] 2026-01-09 03:11:48,677 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 22:12:27] 2026-01-09 03:11:48,678 | INFO     | log transfer has been attempted: DONE
[2026-01-08 22:12:27] 2026-01-09 03:11:48,678 | INFO     | job 6963156446 has finished - writing final server update
[2026-01-08 22:12:27] 2026-01-09 03:11:48,678 | INFO     | total number of processed events: 400 (read)
[2026-01-08 22:12:27] 2026-01-09 03:11:48,680 | INFO     | executing command: lscpu
[2026-01-08 22:12:27] 2026-01-09 03:11:48,705 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 22:12:27] 2026-01-09 03:11:49,899 | INFO     | time since job start (6060s) is within the limit (349056.0s)
[2026-01-08 22:12:27] 2026-01-09 03:11:50,340 | INFO     | monitor loop #448: job 0:6963156446 is in state 'finished'
[2026-01-08 22:12:27] 2026-01-09 03:11:50,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:12:27] 2026-01-09 03:11:51,904 | INFO     | time since job start (6062s) is within the limit (349056.0s)
[2026-01-08 22:12:27] 2026-01-09 03:11:52,844 | INFO     | monitor loop #449: job 0:6963156446 is in state 'finished'
[2026-01-08 22:12:27] 2026-01-09 03:11:52,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:12:27] 2026-01-09 03:11:53,906 | INFO     | time since job start (6064s) is within the limit (349056.0s)
[2026-01-08 22:12:27] 2026-01-09 03:11:54,618 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 22:12:27] 2026-01-09 03:11:54,622 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-08 22:12:27] 2026-01-09 03:11:54,625 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963156446/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 22:12:27] 2026-01-09 03:11:54,625 | INFO     | extracted standard info from prmon json
[2026-01-08 22:12:27] 2026-01-09 03:11:54,625 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 22:12:27] 2026-01-09 03:11:54,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 22:12:27] 2026-01-09 03:11:54,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 22:12:27] 2026-01-09 03:11:54,626 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 22:12:27] 2026-01-09 03:11:54,628 | INFO     | fitting pss+swap vs Time
[2026-01-08 22:12:27] 2026-01-09 03:11:54,629 | INFO     | sum of square deviations: 241429643.0
[2026-01-08 22:12:27] 2026-01-09 03:11:54,629 | INFO     | sum of deviations: -14410834437.500002
[2026-01-08 22:12:27] 2026-01-09 03:11:54,629 | INFO     | mean x: 1767925358.5
[2026-01-08 22:12:27] 2026-01-09 03:11:54,629 | INFO     | mean y: 2806476.7717391304
[2026-01-08 22:12:27] 2026-01-09 03:11:54,629 | INFO     | intersect: 105529531872.29965
[2026-01-08 22:12:27] 2026-01-09 03:11:54,630 | INFO     | chi2: 0.10156130761408722
[2026-01-08 22:12:27] 2026-01-09 03:11:54,630 | INFO     | current memory leak: -59.69 B/s (using 92 data points, chi2=0.10)
[2026-01-08 22:12:27] 2026-01-09 03:11:54,630 | INFO     | could have reported an average CPU frequency of 2133 MHz (7 samples)
[2026-01-08 22:12:27] 2026-01-09 03:11:54,630 | INFO     | ..............................
[2026-01-08 22:12:27] 2026-01-09 03:11:54,631 | INFO     | . Timing measurements:
[2026-01-08 22:12:27] 2026-01-09 03:11:54,631 | INFO     | . get job = 0 s
[2026-01-08 22:12:27] 2026-01-09 03:11:54,631 | INFO     | . initial setup = 2 s
[2026-01-08 22:12:27] 2026-01-09 03:11:54,631 | INFO     | . payload setup = 7 s
[2026-01-08 22:12:27] 2026-01-09 03:11:54,631 | INFO     | . stage-in = 0 s
[2026-01-08 22:12:27] 2026-01-09 03:11:54,631 | INFO     | . payload execution = 6031 s
[2026-01-08 22:12:27] 2026-01-09 03:11:54,631 | INFO     | . stage-out = 0 s
[2026-01-08 22:12:27] 2026-01-09 03:11:54,631 | INFO     | . log creation = 0 s
[2026-01-08 22:12:27] 2026-01-09 03:11:54,631 | INFO     | ..............................
[2026-01-08 22:12:27] 2026-01-09 03:11:54,714 | INFO     | 
[2026-01-08 22:12:27] 2026-01-09 03:11:54,714 | INFO     | job summary report
[2026-01-08 22:12:27] 2026-01-09 03:11:54,714 | INFO     | --------------------------------------------------
[2026-01-08 22:12:27] 2026-01-09 03:11:54,714 | INFO     | PanDA job id: 6963156446
[2026-01-08 22:12:27] 2026-01-09 03:11:54,714 | INFO     | task id: 47898826
[2026-01-08 22:12:27] 2026-01-09 03:11:54,715 | INFO     | errors: (none)
[2026-01-08 22:12:27] 2026-01-09 03:11:54,715 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 22:12:27] 2026-01-09 03:11:54,715 | INFO     | pilot state: finished 
[2026-01-08 22:12:27] 2026-01-09 03:11:54,715 | INFO     | transexitcode: 0
[2026-01-08 22:12:27] 2026-01-09 03:11:54,715 | INFO     | exeerrorcode: 0
[2026-01-08 22:12:27] 2026-01-09 03:11:54,715 | INFO     | exeerrordiag: 
[2026-01-08 22:12:27] 2026-01-09 03:11:54,716 | INFO     | exitcode: 0
[2026-01-08 22:12:27] 2026-01-09 03:11:54,716 | INFO     | exitmsg: OK
[2026-01-08 22:12:27] 2026-01-09 03:11:54,716 | INFO     | cpuconsumptiontime: 66721 s
[2026-01-08 22:12:27] 2026-01-09 03:11:54,716 | INFO     | nevents: 400
[2026-01-08 22:12:27] 2026-01-09 03:11:54,716 | INFO     | neventsw: 0
[2026-01-08 22:12:27] 2026-01-09 03:11:54,716 | INFO     | pid: 30585
[2026-01-08 22:12:27] 2026-01-09 03:11:54,716 | INFO     | pgrp: 30585
[2026-01-08 22:12:27] 2026-01-09 03:11:54,717 | INFO     | corecount: 12
[2026-01-08 22:12:27] 2026-01-09 03:11:54,717 | INFO     | event service: False
[2026-01-08 22:12:27] 2026-01-09 03:11:54,717 | INFO     | sizes: {0: 2283968, 5: 2284230, 11: 2284286, 6042: 2311037, 6043: 2320091, 6049: 2320229}
[2026-01-08 22:12:27] 2026-01-09 03:11:54,717 | INFO     | --------------------------------------------------
[2026-01-08 22:12:27] 2026-01-09 03:11:54,717 | INFO     | 
[2026-01-08 22:12:27] 2026-01-09 03:11:54,717 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 22:12:27] 2026-01-09 03:11:54,741 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,741 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,741 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,742 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,743 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,743 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,744 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,744 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,744 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 22:12:27] 2026-01-09 03:11:54,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,744 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 22:12:27] 2026-01-09 03:11:54,744 | INFO     | job 6963156446 has completed (purged errors)
[2026-01-08 22:12:27] 2026-01-09 03:11:54,745 | INFO     | overall cleanup function is called
[2026-01-08 22:12:27] 2026-01-09 03:11:55,752 | INFO     | --- collectZombieJob: --- 10, [30585]
[2026-01-08 22:12:27] 2026-01-09 03:11:55,752 | INFO     | zombie collector waiting for pid 30585
[2026-01-08 22:12:27] 2026-01-09 03:11:55,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 22:12:27] 2026-01-09 03:11:55,753 | INFO     | collected zombie processes
[2026-01-08 22:12:27] 2026-01-09 03:11:55,753 | INFO     | will attempt to kill all subprocesses of pid=30585
[2026-01-08 22:12:27] 2026-01-09 03:11:55,843 | INFO     | process IDs to be killed: [30585] (in reverse order)
[2026-01-08 22:12:27] 2026-01-09 03:11:55,893 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 22:12:27] 2026-01-09 03:11:55,893 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 22:12:27] 2026-01-09 03:11:55,896 | INFO     | did not find any defunct processes belonging to 30585
[2026-01-08 22:12:27] 2026-01-09 03:11:55,898 | INFO     | did not find any defunct processes belonging to 30585
[2026-01-08 22:12:27] 2026-01-09 03:11:55,898 | INFO     | ready for new job
[2026-01-08 22:12:27] 2026-01-09 03:11:55,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 22:12:27] 2026-01-09 03:11:55,900 | INFO     | ***************************************
[2026-01-08 22:12:27] 2026-01-09 03:11:55,900 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 22:12:27] 2026-01-09 03:11:55,900 | INFO     | ***************************************
[2026-01-08 22:12:27] 2026-01-09 03:11:55,900 | INFO     | 
[2026-01-08 22:12:27] 2026-01-09 03:11:55,901 | INFO     | architecture information:
[2026-01-08 22:12:27] 2026-01-09 03:11:55,901 | INFO     | executing command: cat /etc/os-release
[2026-01-08 22:12:27] 2026-01-09 03:11:55,914 | INFO     | cat /etc/os-release:
[2026-01-08 22:12:27] NAME="CentOS Linux"
[2026-01-08 22:12:27] VERSION="7 (Core)"
[2026-01-08 22:12:27] ID="centos"
[2026-01-08 22:12:27] ID_LIKE="rhel fedora"
[2026-01-08 22:12:27] VERSION_ID="7"
[2026-01-08 22:12:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 22:12:27] ANSI_COLOR="0;31"
[2026-01-08 22:12:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 22:12:27] HOME_URL="https://www.centos.org/"
[2026-01-08 22:12:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 22:12:27] 
[2026-01-08 22:12:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 22:12:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 22:12:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 22:12:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 22:12:27] 
[2026-01-08 22:12:27] 2026-01-09 03:11:55,915 | INFO     | ***************************************
[2026-01-08 22:12:27] 2026-01-09 03:11:56,418 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 22:12:27] 2026-01-09 03:11:56,434 | INFO     | sufficient remaining disk space (29313990656 B)
[2026-01-08 22:12:27] 2026-01-09 03:11:56,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 22:12:27] 2026-01-09 03:11:56,434 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 22:12:27] 2026-01-09 03:11:56,434 | INFO     | update_server=False
[2026-01-08 22:12:27] 2026-01-09 03:11:56,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 22:12:27] 2026-01-09 03:11:56,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:12:27] 2026-01-09 03:11:56,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:12:27] 2026-01-09 03:11:56,435 | INFO     | aborting loop
[2026-01-08 22:12:27] 2026-01-09 03:11:56,449 | INFO     | all data control threads have been joined
[2026-01-08 22:12:27] 2026-01-09 03:11:56,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 22:12:27] 2026-01-09 03:11:57,087 | INFO     | all payload control threads have been joined
[2026-01-08 22:12:27] 2026-01-09 03:11:57,440 | INFO     | [job] retrieve thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:57,441 | INFO     | [job] queue monitor thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:57,441 | INFO     | [job] job monitor thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:57,454 | INFO     | [data] control thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:57,771 | INFO     | all job control threads have been joined
[2026-01-08 22:12:27] 2026-01-09 03:11:58,027 | INFO     | [job] validate thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:58,093 | INFO     | [payload] control thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:58,215 | INFO     | [payload] validate_post thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:58,264 | INFO     | [monitor] cgroup control has ended
[2026-01-08 22:12:27] 2026-01-09 03:11:58,379 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:58,386 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:58,518 | INFO     | [data] copytool_out thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:58,724 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:58,738 | INFO     | [payload] failed_post thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:58,777 | INFO     | [job] control thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:58,844 | INFO     | [data] copytool_in thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:11:59,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 22:12:27] 2026-01-09 03:12:03,196 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:12:07,028 | INFO     | job.realtimelogging is not enabled
[2026-01-08 22:12:27] 2026-01-09 03:12:08,034 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 22:12:27] 2026-01-09 03:12:09,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200387270464)>', '<ExcThread(monitor, started 140199208154880)>']
[2026-01-08 22:12:27] 2026-01-09 03:12:14,843 | INFO     | all workflow threads have been joined
[2026-01-08 22:12:27] 2026-01-09 03:12:14,843 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 22:12:27] 2026-01-09 03:12:14,864 | INFO     | traces error code: 0
[2026-01-08 22:12:27] 2026-01-09 03:12:14,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 22:12:27] 2026-01-09 03:12:27,111 | INFO     | PID=24175 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 22:12:27] 2026-01-09 03:12:27,112 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 22:12:27] 2026-01-09 03:12:27,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 22:12:27] 2026-01-09 03:12:27,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 22:12:27] 2026-01-09 03:12:27,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 22:12:27] 2026-01-09 03:12:27,112 | INFO     | [monitor] control thread has ended
[2026-01-08 22:12:27] 2026-01-09 03:12:27,211 [wrapper] ==== pilot stdout END ====
[2026-01-08 22:12:27] 2026-01-09 03:12:27,215 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 22:12:27] 2026-01-09 03:12:27,218 [wrapper] pilotpid: 24175
[2026-01-08 22:12:27] 2026-01-09 03:12:27,223 [wrapper] Pilot exit status: 0
[2026-01-08 22:12:27] 2026-01-09 03:12:27,238 [wrapper] pandaids: 6963156446
[2026-01-08 22:12:27] 2026-01-09 03:12:27,279 [wrapper] cleanup supervisor_pilot 29697 24176
[2026-01-08 22:12:27] 2026-01-09 03:12:27,283 [wrapper] Test setup, not cleaning
[2026-01-08 22:12:27] 2026-01-09 03:12:27,287 [wrapper] apfmon messages muted
[2026-01-08 22:12:27] 2026-01-09 03:12:27,291 [wrapper] ==== wrapper stdout END ====
[2026-01-08 22:12:27] 2026-01-09 03:12:27,294 [wrapper] ==== wrapper stderr END ====
[2026-01-08 22:12:27]  *** Error codes and diagnostics ***
[2026-01-08 22:12:27]     "exeErrorCode": 0,
[2026-01-08 22:12:27]     "exeErrorDiag": "",
[2026-01-08 22:12:27]     "pilotErrorCode": 0,
[2026-01-08 22:12:27]     "pilotErrorDiag": "",
[2026-01-08 22:12:27]  *** Listing of results directory ***
[2026-01-08 22:12:27] total 440632
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-08 22:12:27] -rwx------ 1 boincer umatlas     36322 Jan  8 14:10 runpilot2-wrapper.sh
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 14:11 queuedata.json
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas       100 Jan  8 20:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 22:12:27] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 20:30 run_atlas
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas       105 Jan  8 20:30 job.xml
[2026-01-08 22:12:27] -rw-r--r-- 2 boincer umatlas 222446527 Jan  8 20:30 EVNT.47898824._000904.pool.root.1
[2026-01-08 22:12:27] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 20:30 start_atlas.sh
[2026-01-08 22:12:27] drwxrwx--x 2 boincer umatlas      4096 Jan  8 20:30 shared
[2026-01-08 22:12:27] -rw-r--r-- 2 boincer umatlas    592398 Jan  8 20:30 input.tar.gz
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas         0 Jan  8 20:30 boinc_lockfile
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas      2518 Jan  8 20:30 pandaJob.out
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas        57 Jan  8 20:30 setup.sh.local
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas    989821 Jan  8 20:30 agis_schedconf.cvmfs.json
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas   1516240 Jan  8 20:30 agis_ddmendpoints.agis.ALL.json
[2026-01-08 22:12:27] drwx------ 5 boincer umatlas      4096 Jan  8 20:30 pilot3
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas      5953 Jan  8 22:10 init_data.xml
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas 222306199 Jan  8 22:11 HITS.47898826._031616.pool.root.1
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas       529 Jan  8 22:11 boinc_task_state.xml
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas      1046 Jan  8 22:11 memory_monitor_summary.json
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas    410971 Jan  8 22:11 log.47898826._031616.job.log.tgz.1
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas      7852 Jan  8 22:11 heartbeat.json
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas        27 Jan  8 22:12 wrapper_checkpoint.txt
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 22:12 boinc_mmap_file
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas        95 Jan  8 22:12 pilot_heartbeat.json
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas       745 Jan  8 22:12 pilotlog.txt
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas    860688 Jan  8 22:12 log.47898826._031616.job.log.1
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas       357 Jan  8 22:12 output.list
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas       620 Jan  8 22:12 runtime_log
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas   1290240 Jan  8 22:12 result.tar.gz
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas      9344 Jan  8 22:12 runtime_log.err
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas       660 Jan  8 22:12 KbdNDmvZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuMlKDm0vJRUm.diag
[2026-01-08 22:12:27] -rw-r--r-- 1 boincer umatlas     21557 Jan  8 22:12 stderr.txt
[2026-01-08 22:12:27] HITS file was successfully produced:
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas 222306199 Jan  8 22:11 shared/HITS.pool.root.1
[2026-01-08 22:12:27]  *** Contents of shared directory: ***
[2026-01-08 22:12:27] total 436192
[2026-01-08 22:12:27] -rw-r--r-- 2 boincer umatlas 222446527 Jan  8 20:30 ATLAS.root_0
[2026-01-08 22:12:27] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 20:30 start_atlas.sh
[2026-01-08 22:12:27] -rw-r--r-- 2 boincer umatlas    592398 Jan  8 20:30 input.tar.gz
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas 222306199 Jan  8 22:11 HITS.pool.root.1
[2026-01-08 22:12:27] -rw------- 1 boincer umatlas   1290240 Jan  8 22:12 result.tar.gz
22:12:28 (20126): run_atlas exited; CPU time 66707.867440
22:12:28 (20126): called boinc_finish(0)

</stderr_txt>
]]>

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