Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:49:37 (14265): wrapper (7.7.26015): starting
06:49:37 (14265): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:49:37] Arguments: --nthreads 8
[2026-01-09 06:49:37] Threads: 8
[2026-01-09 06:49:37] Checking for CVMFS
[2026-01-09 06:49:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:49:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:49:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:49:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:49:37] 2.11.2.0 18344 34999 98320 154933 1 56 14566456 25165825 0 130560 0 13327783 99.779 13864421 3545 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 06:49:37] CVMFS is ok
[2026-01-09 06:49:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:49:37] Checking for apptainer binary...
[2026-01-09 06:49:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:49:37] Running /usr/bin/apptainer --version
[2026-01-09 06:49:37] apptainer version 1.3.2-1.el7
[2026-01-09 06:49:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:49:39] cg-vwn430.simple-grid.lan
[2026-01-09 06:49:39] apptainer works
[2026-01-09 06:49:39] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:49:39] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:49:39] Starting ATLAS job with PandaID=6963156270
[2026-01-09 06:49:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:41:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:41:21] 2026-01-09 08:40:12,523 | INFO     | time since job start (10214s) is within the limit (349056.0s)
[2026-01-09 09:41:21] 2026-01-09 08:40:13,906 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 09:41:21] 2026-01-09 08:40:13,907 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 09:41:21] 2026-01-09 08:40:13,909 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963156270/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:41:21] 2026-01-09 08:40:13,909 | INFO     | extracted standard info from prmon json
[2026-01-09 09:41:21] 2026-01-09 08:40:13,910 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:41:21] 2026-01-09 08:40:13,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:41:21] 2026-01-09 08:40:13,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:41:21] 2026-01-09 08:40:13,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:41:21] 2026-01-09 08:40:13,915 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:41:21] 2026-01-09 08:40:13,915 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,917 | INFO     | sum of deviations: -645778330.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,917 | INFO     | mean x: 1767942899.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,917 | INFO     | mean y: 2486577.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,917 | INFO     | intersect: 793054950.9269495
[2026-01-09 09:41:21] 2026-01-09 08:40:13,918 | INFO     | chi2: 2.4521647581998858
[2026-01-09 09:41:21] 2026-01-09 08:40:13,918 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 09:41:21] 2026-01-09 08:40:13,919 | INFO     | sum of deviations: 10839048092.999998
[2026-01-09 09:41:21] 2026-01-09 08:40:13,920 | INFO     | mean x: 1767942746.5
[2026-01-09 09:41:21] 2026-01-09 08:40:13,920 | INFO     | mean y: 2500151.111111111
[2026-01-09 09:41:21] 2026-01-09 08:40:13,920 | INFO     | intersect: -14533751100.249529
[2026-01-09 09:41:21] 2026-01-09 08:40:13,920 | INFO     | chi2: 1.608409789847503
[2026-01-09 09:41:21] 2026-01-09 08:40:13,920 | INFO     | current chi2=1.608409789847503 (change=34.40857575050448 %)
[2026-01-09 09:41:21] 2026-01-09 08:40:13,921 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,922 | INFO     | sum of deviations: 10534298193.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,922 | INFO     | mean x: 1767942594.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,922 | INFO     | mean y: 2499758.382165605
[2026-01-09 09:41:21] 2026-01-09 08:40:13,922 | INFO     | intersect: -15518296757.305082
[2026-01-09 09:41:21] 2026-01-09 08:40:13,923 | INFO     | chi2: 1.6099269807687244
[2026-01-09 09:41:21] 2026-01-09 08:40:13,923 | INFO     | current chi2=1.6099269807687244 (change=-0.09432863010398226 %)
[2026-01-09 09:41:21] 2026-01-09 08:40:13,923 | INFO     | right removable region: 156
[2026-01-09 09:41:21] 2026-01-09 08:40:13,923 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 09:41:21] 2026-01-09 08:40:13,925 | INFO     | sum of deviations: -25822986070.5
[2026-01-09 09:41:21] 2026-01-09 08:40:13,925 | INFO     | mean x: 1767943051.5
[2026-01-09 09:41:21] 2026-01-09 08:40:13,925 | INFO     | mean y: 2516659.611111111
[2026-01-09 09:41:21] 2026-01-09 08:40:13,925 | INFO     | intersect: 34633738434.626564
[2026-01-09 09:41:21] 2026-01-09 08:40:13,925 | INFO     | chi2: 0.9967447960381722
[2026-01-09 09:41:21] 2026-01-09 08:40:13,926 | INFO     | current chi2=0.9967447960381722 (change=59.352454083473795 %)
[2026-01-09 09:41:21] 2026-01-09 08:40:13,926 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,927 | INFO     | sum of deviations: -23995171243.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,927 | INFO     | mean x: 1767943204.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,927 | INFO     | mean y: 2514232.439490446
[2026-01-09 09:41:21] 2026-01-09 08:40:13,928 | INFO     | intersect: 35356013051.00195
[2026-01-09 09:41:21] 2026-01-09 08:40:13,928 | INFO     | chi2: 0.9820382180222381
[2026-01-09 09:41:21] 2026-01-09 08:40:13,928 | INFO     | current chi2=0.9820382180222381 (change=1.475460727198108 %)
[2026-01-09 09:41:21] 2026-01-09 08:40:13,928 | INFO     | left removable region: 20
[2026-01-09 09:41:21] 2026-01-09 08:40:13,929 | INFO     | sum of square deviations: 779958810.0
[2026-01-09 09:41:21] 2026-01-09 08:40:13,930 | INFO     | sum of deviations: -1962034439.0000002
[2026-01-09 09:41:21] 2026-01-09 08:40:13,930 | INFO     | mean x: 1767943173.5
[2026-01-09 09:41:21] 2026-01-09 08:40:13,930 | INFO     | mean y: 2513652.2647058824
[2026-01-09 09:41:21] 2026-01-09 08:40:13,930 | INFO     | intersect: 4449883626.330326
[2026-01-09 09:41:21] 2026-01-09 08:40:13,930 | INFO     | chi2: 0.04412595612787343
[2026-01-09 09:41:21] 2026-01-09 08:40:13,931 | INFO     | current memory leak: -2.52 B/s (using 136 data points, chi2=0.04)
[2026-01-09 09:41:21] 2026-01-09 08:40:13,931 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 09:41:21] 2026-01-09 08:40:13,932 | INFO     | ..............................
[2026-01-09 09:41:21] 2026-01-09 08:40:13,932 | INFO     | . Timing measurements:
[2026-01-09 09:41:21] 2026-01-09 08:40:13,932 | INFO     | . get job = 0 s
[2026-01-09 09:41:21] 2026-01-09 08:40:13,932 | INFO     | . initial setup = 2 s
[2026-01-09 09:41:21] 2026-01-09 08:40:13,932 | INFO     | . payload setup = 9 s
[2026-01-09 09:41:21] 2026-01-09 08:40:13,932 | INFO     | . stage-in = 0 s
[2026-01-09 09:41:21] 2026-01-09 08:40:13,932 | INFO     | . payload execution = 10174 s
[2026-01-09 09:41:21] 2026-01-09 08:40:13,932 | INFO     | . stage-out = 1 s
[2026-01-09 09:41:21] 2026-01-09 08:40:13,933 | INFO     | . log creation = 0 s
[2026-01-09 09:41:21] 2026-01-09 08:40:13,933 | INFO     | ..............................
[2026-01-09 09:41:21] 2026-01-09 08:40:14,455 | INFO     | 
[2026-01-09 09:41:21] 2026-01-09 08:40:14,455 | INFO     | job summary report
[2026-01-09 09:41:21] 2026-01-09 08:40:14,455 | INFO     | --------------------------------------------------
[2026-01-09 09:41:21] 2026-01-09 08:40:14,455 | INFO     | PanDA job id: 6963156270
[2026-01-09 09:41:21] 2026-01-09 08:40:14,455 | INFO     | task id: 47898826
[2026-01-09 09:41:21] 2026-01-09 08:40:14,456 | INFO     | errors: (none)
[2026-01-09 09:41:21] 2026-01-09 08:40:14,456 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:41:21] 2026-01-09 08:40:14,456 | INFO     | pilot state: finished 
[2026-01-09 09:41:21] 2026-01-09 08:40:14,456 | INFO     | transexitcode: 0
[2026-01-09 09:41:21] 2026-01-09 08:40:14,456 | INFO     | exeerrorcode: 0
[2026-01-09 09:41:21] 2026-01-09 08:40:14,456 | INFO     | exeerrordiag: 
[2026-01-09 09:41:21] 2026-01-09 08:40:14,456 | INFO     | exitcode: 0
[2026-01-09 09:41:21] 2026-01-09 08:40:14,456 | INFO     | exitmsg: OK
[2026-01-09 09:41:21] 2026-01-09 08:40:14,456 | INFO     | cpuconsumptiontime: 75949 s
[2026-01-09 09:41:21] 2026-01-09 08:40:14,457 | INFO     | nevents: 400
[2026-01-09 09:41:21] 2026-01-09 08:40:14,457 | INFO     | neventsw: 0
[2026-01-09 09:41:21] 2026-01-09 08:40:14,457 | INFO     | pid: 24454
[2026-01-09 09:41:21] 2026-01-09 08:40:14,457 | INFO     | pgrp: 24454
[2026-01-09 09:41:21] 2026-01-09 08:40:14,457 | INFO     | corecount: 8
[2026-01-09 09:41:21] 2026-01-09 08:40:14,457 | INFO     | event service: False
[2026-01-09 09:41:21] 2026-01-09 08:40:14,457 | INFO     | sizes: {0: 2283798, 1: 2283997, 7: 2284259, 11: 2284287, 10187: 2312893, 10190: 2322075, 10197: 2322277}
[2026-01-09 09:41:21] 2026-01-09 08:40:14,457 | INFO     | --------------------------------------------------
[2026-01-09 09:41:21] 2026-01-09 08:40:14,457 | INFO     | 
[2026-01-09 09:41:21] 2026-01-09 08:40:14,458 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 09:41:21] 2026-01-09 08:40:14,507 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,507 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,508 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,508 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,508 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,508 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,508 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,508 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,508 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,508 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,508 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,509 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,509 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,509 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:41:21] 2026-01-09 08:40:14,509 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,509 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:41:21] 2026-01-09 08:40:14,509 | INFO     | job 6963156270 has completed (purged errors)
[2026-01-09 09:41:21] 2026-01-09 08:40:14,510 | INFO     | overall cleanup function is called
[2026-01-09 09:41:21] 2026-01-09 08:40:15,518 | INFO     | --- collectZombieJob: --- 10, [24454]
[2026-01-09 09:41:21] 2026-01-09 08:40:15,518 | INFO     | zombie collector waiting for pid 24454
[2026-01-09 09:41:21] 2026-01-09 08:40:15,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:41:21] 2026-01-09 08:40:15,518 | INFO     | collected zombie processes
[2026-01-09 09:41:21] 2026-01-09 08:40:15,518 | INFO     | will attempt to kill all subprocesses of pid=24454
[2026-01-09 09:41:21] 2026-01-09 08:40:15,582 | INFO     | process IDs to be killed: [24454] (in reverse order)
[2026-01-09 09:41:21] 2026-01-09 08:40:15,685 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:41:21] 2026-01-09 08:40:15,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:41:21] 2026-01-09 08:40:15,687 | INFO     | did not find any defunct processes belonging to 24454
[2026-01-09 09:41:21] 2026-01-09 08:40:15,689 | INFO     | did not find any defunct processes belonging to 24454
[2026-01-09 09:41:21] 2026-01-09 08:40:15,689 | INFO     | ready for new job
[2026-01-09 09:41:21] 2026-01-09 08:40:15,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:41:21] 2026-01-09 08:40:15,691 | INFO     | ***************************************
[2026-01-09 09:41:21] 2026-01-09 08:40:15,691 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:41:21] 2026-01-09 08:40:15,691 | INFO     | ***************************************
[2026-01-09 09:41:21] 2026-01-09 08:40:15,691 | INFO     | 
[2026-01-09 09:41:21] 2026-01-09 08:40:15,692 | INFO     | pilot is running in a VM
[2026-01-09 09:41:21] 2026-01-09 08:40:15,692 | INFO     | architecture information:
[2026-01-09 09:41:21] 2026-01-09 08:40:15,693 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:41:21] 2026-01-09 08:40:15,725 | INFO     | cat /etc/os-release:
[2026-01-09 09:41:21] NAME="CentOS Linux"
[2026-01-09 09:41:21] VERSION="7 (Core)"
[2026-01-09 09:41:21] ID="centos"
[2026-01-09 09:41:21] ID_LIKE="rhel fedora"
[2026-01-09 09:41:21] VERSION_ID="7"
[2026-01-09 09:41:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:41:21] ANSI_COLOR="0;31"
[2026-01-09 09:41:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:41:21] HOME_URL="https://www.centos.org/"
[2026-01-09 09:41:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:41:21] 
[2026-01-09 09:41:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:41:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:41:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:41:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:41:21] 
[2026-01-09 09:41:21] 2026-01-09 08:40:15,725 | INFO     | ***************************************
[2026-01-09 09:41:21] 2026-01-09 08:40:16,228 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 09:41:21] 2026-01-09 08:40:16,285 | INFO     | sufficient remaining disk space (498142806016 B)
[2026-01-09 09:41:21] 2026-01-09 08:40:16,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:41:21] 2026-01-09 08:40:16,285 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:41:21] 2026-01-09 08:40:16,285 | INFO     | update_server=False
[2026-01-09 09:41:21] 2026-01-09 08:40:16,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:41:21] 2026-01-09 08:40:16,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:41:21] 2026-01-09 08:40:16,286 | INFO     | aborting loop
[2026-01-09 09:41:21] 2026-01-09 08:40:16,698 | INFO     | all job control threads have been joined
[2026-01-09 09:41:21] 2026-01-09 08:40:16,767 | INFO     | all payload control threads have been joined
[2026-01-09 09:41:21] 2026-01-09 08:40:16,785 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:41:21] 2026-01-09 08:40:16,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:41:21] 2026-01-09 08:40:17,210 | INFO     | all data control threads have been joined
[2026-01-09 09:41:21] 2026-01-09 08:40:17,292 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:17,293 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:17,402 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:17,404 | INFO     | [job] validate thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:17,579 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:17,676 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:17,704 | INFO     | [job] control thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:17,773 | INFO     | [payload] control thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:17,943 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:18,216 | INFO     | [data] control thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:18,263 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:18,381 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:18,791 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:19,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:41:21] 2026-01-09 08:40:20,071 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:20,897 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:27,095 | INFO     | job.realtimelogging is not enabled
[2026-01-09 09:41:21] 2026-01-09 08:40:28,100 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:41:21] 2026-01-09 08:40:45,622 | INFO     | PID=17992 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:41:21] 2026-01-09 08:40:45,623 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:41:21] 2026-01-09 08:40:45,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:41:21] 2026-01-09 08:40:45,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:41:21] 2026-01-09 08:41:15,119 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:41:21] 2026-01-09 08:41:15,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243793483584)>', '<ExcThread(monitor, started 140243214784256)>']
[2026-01-09 09:41:21] 2026-01-09 08:41:15,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:41:21] 2026-01-09 08:41:15,775 | INFO     | [monitor] control thread has ended
[2026-01-09 09:41:21] 2026-01-09 08:41:20,679 | INFO     | all workflow threads have been joined
[2026-01-09 09:41:21] 2026-01-09 08:41:20,679 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:41:21] 2026-01-09 08:41:20,679 | INFO     | traces error code: 0
[2026-01-09 09:41:21] 2026-01-09 08:41:20,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:41:21] 2026-01-09 08:41:20,881 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:41:21] 2026-01-09 08:41:20,890 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:41:21] 2026-01-09 08:41:20,894 [wrapper] pilotpid: 17992
[2026-01-09 09:41:21] 2026-01-09 08:41:20,900 [wrapper] Pilot exit status: 0
[2026-01-09 09:41:21] 2026-01-09 08:41:20,932 [wrapper] pandaids: 6963156270
[2026-01-09 09:41:21] 2026-01-09 08:41:20,971 [wrapper] cleanup supervisor_pilot 11051 17993
[2026-01-09 09:41:21] 2026-01-09 08:41:20,977 [wrapper] Test setup, not cleaning
[2026-01-09 09:41:21] 2026-01-09 08:41:20,981 [wrapper] apfmon messages muted
[2026-01-09 09:41:21] 2026-01-09 08:41:20,984 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:41:21] 2026-01-09 08:41:20,988 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:41:21]  *** Error codes and diagnostics ***
[2026-01-09 09:41:21]     "exeErrorCode": 0,
[2026-01-09 09:41:21]     "exeErrorDiag": "",
[2026-01-09 09:41:21]     "pilotErrorCode": 0,
[2026-01-09 09:41:21]     "pilotErrorDiag": "",
[2026-01-09 09:41:21]  *** Listing of results directory ***
[2026-01-09 09:41:21] total 439124
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 09:41:21] -rwx------. 1 boinc boinc     36322 Jan  8 20:10 runpilot2-wrapper.sh
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:41:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:49 run_atlas
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:49 job.xml
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc      6389 Jan  9 06:49 init_data.xml
[2026-01-09 09:41:21] -rw-r--r--. 2 boinc boinc 222361591 Jan  9 06:49 EVNT.47898824._000897.pool.root.1
[2026-01-09 09:41:21] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:49 start_atlas.sh
[2026-01-09 09:41:21] drwxrwx--x. 2 boinc boinc        68 Jan  9 06:49 shared
[2026-01-09 09:41:21] -rw-r--r--. 2 boinc boinc    592396 Jan  9 06:49 input.tar.gz
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:49 boinc_lockfile
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc      2519 Jan  9 06:49 pandaJob.out
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc    989771 Jan  9 06:49 agis_schedconf.cvmfs.json
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc   1516240 Jan  9 06:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:41:21] drwx------. 5 boinc boinc      4096 Jan  9 06:49 pilot3
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc 219834065 Jan  9 09:39 HITS.47898826._031447.pool.root.1
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc       531 Jan  9 09:39 boinc_task_state.xml
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc      1012 Jan  9 09:40 memory_monitor_summary.json
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc        95 Jan  9 09:40 pilot_heartbeat.json
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc    413517 Jan  9 09:40 log.47898826._031447.job.log.tgz.1
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc      7769 Jan  9 09:40 heartbeat.json
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:40 boinc_mmap_file
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc        28 Jan  9 09:40 wrapper_checkpoint.txt
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc      4881 Jan  9 09:41 pilotlog.txt
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc   1372826 Jan  9 09:41 log.47898826._031447.job.log.1
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc       357 Jan  9 09:41 output.list
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:41 runtime_log
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc   1802240 Jan  9 09:41 result.tar.gz
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc      8817 Jan  9 09:41 runtime_log.err
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc       655 Jan  9 09:41 KbKLDmkZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5LlKDmLHEQan.diag
[2026-01-09 09:41:21] -rw-r--r--. 1 boinc boinc     20690 Jan  9 09:41 stderr.txt
[2026-01-09 09:41:21] HITS file was successfully produced:
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc 219834065 Jan  9 09:39 shared/HITS.pool.root.1
[2026-01-09 09:41:21]  *** Contents of shared directory: ***
[2026-01-09 09:41:21] total 434192
[2026-01-09 09:41:21] -rw-r--r--. 2 boinc boinc 222361591 Jan  9 06:49 ATLAS.root_0
[2026-01-09 09:41:21] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:49 start_atlas.sh
[2026-01-09 09:41:21] -rw-r--r--. 2 boinc boinc    592396 Jan  9 06:49 input.tar.gz
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc 219834065 Jan  9 09:39 HITS.pool.root.1
[2026-01-09 09:41:21] -rw-------. 1 boinc boinc   1802240 Jan  9 09:41 result.tar.gz
09:41:22 (14265): run_atlas exited; CPU time 76017.469150
09:41:22 (14265): called boinc_finish(0)

</stderr_txt>
]]>

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