Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:30:09 (13771): wrapper (7.7.26015): starting
20:30:09 (13771): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 20:30:09] Arguments: --nthreads 12
[2026-01-08 20:30:09] Threads: 12
[2026-01-08 20:30:09] Checking for CVMFS
[2026-01-08 20:30:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:30:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:30:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:30:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:30:10] 2.11.2.0 723 180331 95732 154926 3 58 11165780 20275201 1 130560 0 69886936 99.900 10344050 36026 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 20:30:10] CVMFS is ok
[2026-01-08 20:30:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:30:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:30:10] Further information can be found at the LHC@home message board.
[2026-01-08 20:30:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:30:10] Checking for apptainer binary...
[2026-01-08 20:30:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:30:10] Running /usr/bin/apptainer --version
[2026-01-08 20:30:10] apptainer version 1.3.2-1.el7
[2026-01-08 20:30:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:30:11] c-205-1.aglt2.org
[2026-01-08 20:30:11] apptainer works
[2026-01-08 20:30:11] Set ATHENA_PROC_NUMBER=12
[2026-01-08 20:30:11] Set ATHENA_CORE_NUMBER=12
[2026-01-08 20:30:11] Starting ATLAS job with PandaID=6963156269
[2026-01-08 20:30:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 22:12:43]  *** The last 200 lines of the pilot log: ***
[2026-01-08 22:12:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-08 22:12:43]  replicas=None
[2026-01-08 22:12:43]  scope=mc23_13p6TeV
[2026-01-08 22:12:43]  status=None
[2026-01-08 22:12:43]  status_code=0
[2026-01-08 22:12:43]  storage_token=
[2026-01-08 22:12:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963156269/log.47898826._031446.job.log.tgz.1
[2026-01-08 22:12:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/55/log.47898826._031446.job.log.tgz.1
[2026-01-08 22:12:43]  workdir=None
[2026-01-08 22:12:43] ]
[2026-01-08 22:12:43] 2026-01-09 03:11:35,181 | INFO     | transferring file log.47898826._031446.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963156269/log.47898826._031446.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-08 22:12:43] 2026-01-09 03:11:35,181 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963156269/log.47898826._031446.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._031446.job
[2026-01-08 22:12:43] 2026-01-09 03:11:35,203 | INFO     | adding to output.list: log.47898826._031446.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/55/log.47898826._031446.job.log.tg
[2026-01-08 22:12:43] 2026-01-09 03:11:35,204 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 22:12:43] 2026-01-09 03:11:35,204 | INFO     | summary of transferred files:
[2026-01-08 22:12:43] 2026-01-09 03:11:35,204 | INFO     |  -- lfn=log.47898826._031446.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 22:12:43] 2026-01-09 03:11:35,204 | INFO     | stage-out finished correctly
[2026-01-08 22:12:43] 2026-01-09 03:11:35,375 | INFO     | monitor loop #449: job 0:6963156269 is in state 'finished'
[2026-01-08 22:12:43] 2026-01-09 03:11:35,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:12:43] 2026-01-09 03:11:35,423 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 22:12:43] 2026-01-09 03:11:35,665 | INFO     | PID=17446 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 22:12:43] 2026-01-09 03:11:36,666 | INFO     | time since job start (6070s) is within the limit (349056.0s)
[2026-01-08 22:12:43] 2026-01-09 03:11:37,879 | INFO     | monitor loop #450: job 0:6963156269 is in state 'finished'
[2026-01-08 22:12:43] 2026-01-09 03:11:37,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:12:43] 2026-01-09 03:11:37,934 | INFO     | job 6963156269 has state=finished
[2026-01-08 22:12:43] 2026-01-09 03:11:37,935 | INFO     | preparing for final server update for job 6963156269 in state='finished'
[2026-01-08 22:12:43] 2026-01-09 03:11:37,935 | INFO     | this job has now completed (state=finished)
[2026-01-08 22:12:43] 2026-01-09 03:11:37,935 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 22:12:43] 2026-01-09 03:11:37,936 | INFO     | log transfer has been attempted: DONE
[2026-01-08 22:12:43] 2026-01-09 03:11:37,936 | INFO     | job 6963156269 has finished - writing final server update
[2026-01-08 22:12:43] 2026-01-09 03:11:37,936 | INFO     | total number of processed events: 400 (read)
[2026-01-08 22:12:43] 2026-01-09 03:11:37,937 | INFO     | executing command: lscpu
[2026-01-08 22:12:43] 2026-01-09 03:11:37,960 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 22:12:43] 2026-01-09 03:11:38,672 | INFO     | time since job start (6072s) is within the limit (349056.0s)
[2026-01-08 22:12:43] 2026-01-09 03:11:40,382 | INFO     | monitor loop #451: job 0:6963156269 is in state 'finished'
[2026-01-08 22:12:43] 2026-01-09 03:11:40,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 22:12:43] 2026-01-09 03:11:40,678 | INFO     | time since job start (6074s) is within the limit (349056.0s)
[2026-01-08 22:12:43] 2026-01-09 03:11:42,679 | INFO     | time since job start (6076s) is within the limit (349056.0s)
[2026-01-08 22:12:43] 2026-01-09 03:11:42,782 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 22:12:43] 2026-01-09 03:11:42,786 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-08 22:12:43] 2026-01-09 03:11:42,788 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963156269/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 22:12:43] 2026-01-09 03:11:42,788 | INFO     | extracted standard info from prmon json
[2026-01-08 22:12:43] 2026-01-09 03:11:42,788 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 22:12:43] 2026-01-09 03:11:42,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 22:12:43] 2026-01-09 03:11:42,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 22:12:43] 2026-01-09 03:11:42,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 22:12:43] 2026-01-09 03:11:42,791 | INFO     | fitting pss+swap vs Time
[2026-01-08 22:12:43] 2026-01-09 03:11:42,791 | INFO     | sum of square deviations: 241429643.0
[2026-01-08 22:12:43] 2026-01-09 03:11:42,791 | INFO     | sum of deviations: -15937316127.5
[2026-01-08 22:12:43] 2026-01-09 03:11:42,792 | INFO     | mean x: 1767925336.5
[2026-01-08 22:12:43] 2026-01-09 03:11:42,792 | INFO     | mean y: 2788626.554347826
[2026-01-08 22:12:43] 2026-01-09 03:11:42,792 | INFO     | intersect: 116707533857.93141
[2026-01-08 22:12:43] 2026-01-09 03:11:42,792 | INFO     | chi2: 0.07462197084118695
[2026-01-08 22:12:43] 2026-01-09 03:11:42,792 | INFO     | current memory leak: -66.01 B/s (using 92 data points, chi2=0.07)
[2026-01-08 22:12:43] 2026-01-09 03:11:42,792 | INFO     | could have reported an average CPU frequency of 2131 MHz (7 samples)
[2026-01-08 22:12:43] 2026-01-09 03:11:42,793 | INFO     | ..............................
[2026-01-08 22:12:43] 2026-01-09 03:11:42,793 | INFO     | . Timing measurements:
[2026-01-08 22:12:43] 2026-01-09 03:11:42,793 | INFO     | . get job = 0 s
[2026-01-08 22:12:43] 2026-01-09 03:11:42,793 | INFO     | . initial setup = 2 s
[2026-01-08 22:12:43] 2026-01-09 03:11:42,793 | INFO     | . payload setup = 7 s
[2026-01-08 22:12:43] 2026-01-09 03:11:42,793 | INFO     | . stage-in = 0 s
[2026-01-08 22:12:43] 2026-01-09 03:11:42,793 | INFO     | . payload execution = 6039 s
[2026-01-08 22:12:43] 2026-01-09 03:11:42,793 | INFO     | . stage-out = 0 s
[2026-01-08 22:12:43] 2026-01-09 03:11:42,793 | INFO     | . log creation = 0 s
[2026-01-08 22:12:43] 2026-01-09 03:11:42,794 | INFO     | ..............................
[2026-01-08 22:12:43] 2026-01-09 03:11:42,873 | INFO     | 
[2026-01-08 22:12:43] 2026-01-09 03:11:42,874 | INFO     | job summary report
[2026-01-08 22:12:43] 2026-01-09 03:11:42,874 | INFO     | --------------------------------------------------
[2026-01-08 22:12:43] 2026-01-09 03:11:42,874 | INFO     | PanDA job id: 6963156269
[2026-01-08 22:12:43] 2026-01-09 03:11:42,874 | INFO     | task id: 47898826
[2026-01-08 22:12:43] 2026-01-09 03:11:42,874 | INFO     | errors: (none)
[2026-01-08 22:12:43] 2026-01-09 03:11:42,875 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 22:12:43] 2026-01-09 03:11:42,875 | INFO     | pilot state: finished 
[2026-01-08 22:12:43] 2026-01-09 03:11:42,875 | INFO     | transexitcode: 0
[2026-01-08 22:12:43] 2026-01-09 03:11:42,875 | INFO     | exeerrorcode: 0
[2026-01-08 22:12:43] 2026-01-09 03:11:42,875 | INFO     | exeerrordiag: 
[2026-01-08 22:12:43] 2026-01-09 03:11:42,875 | INFO     | exitcode: 0
[2026-01-08 22:12:43] 2026-01-09 03:11:42,875 | INFO     | exitmsg: OK
[2026-01-08 22:12:43] 2026-01-09 03:11:42,876 | INFO     | cpuconsumptiontime: 66694 s
[2026-01-08 22:12:43] 2026-01-09 03:11:42,876 | INFO     | nevents: 400
[2026-01-08 22:12:43] 2026-01-09 03:11:42,876 | INFO     | neventsw: 0
[2026-01-08 22:12:43] 2026-01-09 03:11:42,876 | INFO     | pid: 23905
[2026-01-08 22:12:43] 2026-01-09 03:11:42,876 | INFO     | pgrp: 23905
[2026-01-08 22:12:43] 2026-01-09 03:11:42,876 | INFO     | corecount: 12
[2026-01-08 22:12:43] 2026-01-09 03:11:42,876 | INFO     | event service: False
[2026-01-08 22:12:43] 2026-01-09 03:11:42,877 | INFO     | sizes: {0: 2283798, 1: 2283997, 6: 2284259, 11: 2284287, 6050: 2311037, 6052: 2320035, 6053: 2320219, 6060: 2320413}
[2026-01-08 22:12:43] 2026-01-09 03:11:42,877 | INFO     | --------------------------------------------------
[2026-01-08 22:12:43] 2026-01-09 03:11:42,877 | INFO     | 
[2026-01-08 22:12:43] 2026-01-09 03:11:42,877 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 22:12:43] 2026-01-09 03:11:42,899 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,900 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,900 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,900 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,902 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 22:12:43] 2026-01-09 03:11:42,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 22:12:43] 2026-01-09 03:11:42,903 | INFO     | job 6963156269 has completed (purged errors)
[2026-01-08 22:12:43] 2026-01-09 03:11:42,903 | INFO     | overall cleanup function is called
[2026-01-08 22:12:43] 2026-01-09 03:11:43,908 | INFO     | --- collectZombieJob: --- 10, [23905]
[2026-01-08 22:12:43] 2026-01-09 03:11:43,908 | INFO     | zombie collector waiting for pid 23905
[2026-01-08 22:12:43] 2026-01-09 03:11:43,908 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 22:12:43] 2026-01-09 03:11:43,908 | INFO     | collected zombie processes
[2026-01-08 22:12:43] 2026-01-09 03:11:43,908 | INFO     | will attempt to kill all subprocesses of pid=23905
[2026-01-08 22:12:43] 2026-01-09 03:11:43,999 | INFO     | process IDs to be killed: [23905] (in reverse order)
[2026-01-08 22:12:43] 2026-01-09 03:11:44,051 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 22:12:43] 2026-01-09 03:11:44,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 22:12:43] 2026-01-09 03:11:44,054 | INFO     | did not find any defunct processes belonging to 23905
[2026-01-08 22:12:43] 2026-01-09 03:11:44,057 | INFO     | did not find any defunct processes belonging to 23905
[2026-01-08 22:12:43] 2026-01-09 03:11:44,057 | INFO     | ready for new job
[2026-01-08 22:12:43] 2026-01-09 03:11:44,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 22:12:43] 2026-01-09 03:11:44,058 | INFO     | ***************************************
[2026-01-08 22:12:43] 2026-01-09 03:11:44,058 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 22:12:43] 2026-01-09 03:11:44,058 | INFO     | ***************************************
[2026-01-08 22:12:43] 2026-01-09 03:11:44,058 | INFO     | 
[2026-01-08 22:12:43] 2026-01-09 03:11:44,059 | INFO     | architecture information:
[2026-01-08 22:12:43] 2026-01-09 03:11:44,059 | INFO     | executing command: cat /etc/os-release
[2026-01-08 22:12:43] 2026-01-09 03:11:44,074 | INFO     | cat /etc/os-release:
[2026-01-08 22:12:43] NAME="CentOS Linux"
[2026-01-08 22:12:43] VERSION="7 (Core)"
[2026-01-08 22:12:43] ID="centos"
[2026-01-08 22:12:43] ID_LIKE="rhel fedora"
[2026-01-08 22:12:43] VERSION_ID="7"
[2026-01-08 22:12:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 22:12:43] ANSI_COLOR="0;31"
[2026-01-08 22:12:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 22:12:43] HOME_URL="https://www.centos.org/"
[2026-01-08 22:12:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 22:12:43] 
[2026-01-08 22:12:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 22:12:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 22:12:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 22:12:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 22:12:43] 
[2026-01-08 22:12:43] 2026-01-09 03:11:44,075 | INFO     | ***************************************
[2026-01-08 22:12:43] 2026-01-09 03:11:44,578 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 22:12:43] 2026-01-09 03:11:44,594 | INFO     | sufficient remaining disk space (29442965504 B)
[2026-01-08 22:12:43] 2026-01-09 03:11:44,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 22:12:43] 2026-01-09 03:11:44,594 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 22:12:43] 2026-01-09 03:11:44,594 | INFO     | update_server=False
[2026-01-08 22:12:43] 2026-01-09 03:11:44,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 22:12:43] 2026-01-09 03:11:44,595 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-08 22:12:43] 2026-01-09 03:11:44,595 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 22:12:43] 2026-01-09 03:11:44,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 22:12:43] 2026-01-09 03:11:44,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:12:43] 2026-01-09 03:11:44,596 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:12:43] 2026-01-09 03:11:44,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 22:12:43] 2026-01-09 03:11:44,596 | INFO     | aborting loop
[2026-01-08 22:12:43] 2026-01-09 03:11:44,659 | INFO     | all payload control threads have been joined
[2026-01-08 22:12:43] 2026-01-09 03:11:45,586 | INFO     | all data control threads have been joined
[2026-01-08 22:12:43] 2026-01-09 03:11:45,600 | INFO     | [job] retrieve thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:45,602 | INFO     | [job] queue monitor thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:45,602 | INFO     | [job] job monitor thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:45,661 | INFO     | [payload] control thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:45,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 22:12:43] 2026-01-09 03:11:45,888 | INFO     | [job] validate thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:46,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 22:12:43] 2026-01-09 03:11:46,034 | INFO     | all job control threads have been joined
[2026-01-08 22:12:43] 2026-01-09 03:11:46,237 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:46,382 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:46,389 | INFO     | [payload] failed_post thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:46,410 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:46,592 | INFO     | [data] control thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:46,998 | INFO     | [data] copytool_in thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:47,039 | INFO     | [job] control thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:47,139 | INFO     | [payload] validate_post thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:47,805 | INFO     | [data] copytool_out thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:50,014 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:11:55,538 | INFO     | job.realtimelogging is not enabled
[2026-01-08 22:12:43] 2026-01-09 03:11:56,543 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 22:12:43] 2026-01-09 03:12:36,126 | INFO     | [monitor] cgroup control has ended
[2026-01-08 22:12:43] 2026-01-09 03:12:37,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140434364884800)>', '<ExcThread(monitor, started 140433460020992)>']
[2026-01-08 22:12:43] 2026-01-09 03:12:38,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 22:12:43] 2026-01-09 03:12:38,852 | INFO     | [monitor] control thread has ended
[2026-01-08 22:12:43] 2026-01-09 03:12:42,910 | INFO     | all workflow threads have been joined
[2026-01-08 22:12:43] 2026-01-09 03:12:42,910 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 22:12:43] 2026-01-09 03:12:42,911 | INFO     | traces error code: 0
[2026-01-08 22:12:43] 2026-01-09 03:12:42,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 22:12:43] 2026-01-09 03:12:43,000 [wrapper] ==== pilot stdout END ====
[2026-01-08 22:12:43] 2026-01-09 03:12:43,004 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 22:12:43] 2026-01-09 03:12:43,008 [wrapper] pilotpid: 17446
[2026-01-08 22:12:43] 2026-01-09 03:12:43,012 [wrapper] Pilot exit status: 0
[2026-01-08 22:12:43] 2026-01-09 03:12:43,028 [wrapper] pandaids: 6963156269
[2026-01-08 22:12:43] 2026-01-09 03:12:43,074 [wrapper] cleanup supervisor_pilot  6157 17447
[2026-01-08 22:12:43] 2026-01-09 03:12:43,078 [wrapper] Test setup, not cleaning
[2026-01-08 22:12:43] 2026-01-09 03:12:43,082 [wrapper] apfmon messages muted
[2026-01-08 22:12:43] 2026-01-09 03:12:43,086 [wrapper] ==== wrapper stdout END ====
[2026-01-08 22:12:43] 2026-01-09 03:12:43,090 [wrapper] ==== wrapper stderr END ====
[2026-01-08 22:12:43]  *** Error codes and diagnostics ***
[2026-01-08 22:12:43]     "exeErrorCode": 0,
[2026-01-08 22:12:43]     "exeErrorDiag": "",
[2026-01-08 22:12:43]     "pilotErrorCode": 0,
[2026-01-08 22:12:43]     "pilotErrorDiag": "",
[2026-01-08 22:12:43]  *** Listing of results directory ***
[2026-01-08 22:12:43] total 434868
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-08 22:12:43] -rwx------ 1 boincer umatlas     36322 Jan  8 14:10 runpilot2-wrapper.sh
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 14:11 queuedata.json
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas       100 Jan  8 20:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 22:12:43] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 20:30 run_atlas
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas       105 Jan  8 20:30 job.xml
[2026-01-08 22:12:43] -rw-r--r-- 2 boincer umatlas 222361591 Jan  8 20:30 EVNT.47898824._000897.pool.root.1
[2026-01-08 22:12:43] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 20:30 start_atlas.sh
[2026-01-08 22:12:43] drwxrwx--x 2 boincer umatlas      4096 Jan  8 20:30 shared
[2026-01-08 22:12:43] -rw-r--r-- 2 boincer umatlas    592392 Jan  8 20:30 input.tar.gz
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas         0 Jan  8 20:30 boinc_lockfile
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 20:30 pandaJob.out
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas        57 Jan  8 20:30 setup.sh.local
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas    989821 Jan  8 20:30 agis_schedconf.cvmfs.json
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas   1516240 Jan  8 20:30 agis_ddmendpoints.agis.ALL.json
[2026-01-08 22:12:43] drwx------ 5 boincer umatlas      4096 Jan  8 20:30 pilot3
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas      5952 Jan  8 22:09 init_data.xml
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas        95 Jan  8 22:10 pilot_heartbeat.json
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas 216461393 Jan  8 22:11 HITS.47898826._031446.pool.root.1
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas       530 Jan  8 22:11 boinc_task_state.xml
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas      1046 Jan  8 22:11 memory_monitor_summary.json
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas    420827 Jan  8 22:11 log.47898826._031446.job.log.tgz.1
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas      7853 Jan  8 22:11 heartbeat.json
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 22:12 boinc_mmap_file
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas        27 Jan  8 22:12 wrapper_checkpoint.txt
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas      4624 Jan  8 22:12 pilotlog.txt
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas    862596 Jan  8 22:12 log.47898826._031446.job.log.1
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas       357 Jan  8 22:12 output.list
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas       620 Jan  8 22:12 runtime_log
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas   1300480 Jan  8 22:12 result.tar.gz
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas      9339 Jan  8 22:12 runtime_log.err
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas       659 Jan  8 22:12 1OJLDmkZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4LlKDmDwDvvn.diag
[2026-01-08 22:12:43] -rw-r--r-- 1 boincer umatlas     21928 Jan  8 22:12 stderr.txt
[2026-01-08 22:12:43] HITS file was successfully produced:
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas 216461393 Jan  8 22:11 shared/HITS.pool.root.1
[2026-01-08 22:12:43]  *** Contents of shared directory: ***
[2026-01-08 22:12:43] total 430416
[2026-01-08 22:12:43] -rw-r--r-- 2 boincer umatlas 222361591 Jan  8 20:30 ATLAS.root_0
[2026-01-08 22:12:43] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 20:30 start_atlas.sh
[2026-01-08 22:12:43] -rw-r--r-- 2 boincer umatlas    592392 Jan  8 20:30 input.tar.gz
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas 216461393 Jan  8 22:11 HITS.pool.root.1
[2026-01-08 22:12:43] -rw------- 1 boincer umatlas   1300480 Jan  8 22:12 result.tar.gz
22:12:44 (13771): run_atlas exited; CPU time 66664.479106
22:12:44 (13771): called boinc_finish(0)

</stderr_txt>
]]>

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