Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:38:15 (1439811): wrapper (7.7.26015): starting
20:38:15 (1439811): wrapper: running run_atlas (--nthreads 10)
[2026-01-08 20:38:15] Arguments: --nthreads 10
[2026-01-08 20:38:15] Threads: 10
[2026-01-08 20:38:15] Checking for CVMFS
[2026-01-08 20:38:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:38:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:38:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:38:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:38:18] 2.13.3.0 6317 20859 185196 154926 0 606 36238965 39288833 7858 16776704 0 6733898 99.417 12251824 41390 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 20:38:18] CVMFS is ok
[2026-01-08 20:38:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:38:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:38:18] Further information can be found at the LHC@home message board.
[2026-01-08 20:38:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:38:18] Checking for apptainer binary...
[2026-01-08 20:38:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:38:18] Running /usr/bin/apptainer --version
[2026-01-08 20:38:18] apptainer version 1.4.5-2.el9
[2026-01-08 20:38:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:38:18] c-211-18.aglt2.org
[2026-01-08 20:38:18] apptainer works
[2026-01-08 20:38:18] Set ATHENA_PROC_NUMBER=10
[2026-01-08 20:38:18] Set ATHENA_CORE_NUMBER=10
[2026-01-08 20:38:19] Starting ATLAS job with PandaID=6963155918
[2026-01-08 20:38:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:45:09]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:45:09] 2026-01-10 02:44:01,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:45:09] 2026-01-10 02:44:02,213 | INFO     | time since job start (90313s) is within the limit (349056.0s)
[2026-01-09 21:45:09] 2026-01-10 02:44:04,221 | INFO     | time since job start (90315s) is within the limit (349056.0s)
[2026-01-09 21:45:09] 2026-01-10 02:44:04,321 | INFO     | monitor loop #4463: job 0:6963155918 is in state 'finished'
[2026-01-09 21:45:09] 2026-01-10 02:44:04,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:45:09] 2026-01-10 02:44:06,164 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 21:45:09] 2026-01-10 02:44:06,172 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9986500000005
[2026-01-09 21:45:09] 2026-01-10 02:44:06,180 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963155918/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:45:09] 2026-01-10 02:44:06,181 | INFO     | extracted standard info from prmon json
[2026-01-09 21:45:09] 2026-01-10 02:44:06,181 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:45:09] 2026-01-10 02:44:06,182 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:45:09] 2026-01-10 02:44:06,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:45:09] 2026-01-10 02:44:06,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:45:09] 2026-01-10 02:44:06,246 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:45:09] 2026-01-10 02:44:06,258 | INFO     | sum of square deviations: 1003180591286.4132
[2026-01-09 21:45:09] 2026-01-10 02:44:06,286 | INFO     | time since job start (90317s) is within the limit (349056.0s)
[2026-01-09 21:45:09] 2026-01-10 02:44:06,429 | INFO     | sum of deviations: 389822980770.3988
[2026-01-09 21:45:09] 2026-01-10 02:44:06,429 | INFO     | mean x: 1767967873.2461123
[2026-01-09 21:45:09] 2026-01-10 02:44:06,429 | INFO     | mean y: 2603612.721433401
[2026-01-09 21:45:09] 2026-01-10 02:44:06,430 | INFO     | intersect: -684405797.3901838
[2026-01-09 21:45:09] 2026-01-10 02:44:06,440 | INFO     | chi2: 3.083351918449906
[2026-01-09 21:45:09] 2026-01-10 02:44:06,442 | INFO     | sum of square deviations: 993041087008.6256
[2026-01-09 21:45:09] 2026-01-10 02:44:06,634 | INFO     | sum of deviations: 483758894319.7388
[2026-01-09 21:45:09] 2026-01-10 02:44:06,635 | INFO     | mean x: 1767967720.7496607
[2026-01-09 21:45:09] 2026-01-10 02:44:06,635 | INFO     | mean y: 2605021.476255088
[2026-01-09 21:45:09] 2026-01-10 02:44:06,635 | INFO     | intersect: -858658546.5390487
[2026-01-09 21:45:09] 2026-01-10 02:44:06,645 | INFO     | chi2: 2.3867008223800905
[2026-01-09 21:45:09] 2026-01-10 02:44:06,646 | INFO     | current chi2=2.3867008223800905 (change=22.593953414829237 %)
[2026-01-09 21:45:09] 2026-01-10 02:44:06,646 | INFO     | right removable region: 1473
[2026-01-09 21:45:09] 2026-01-10 02:44:06,656 | INFO     | sum of square deviations: 993040323045.6196
[2026-01-09 21:45:09] 2026-01-10 02:44:06,848 | INFO     | monitor loop #4464: job 0:6963155918 is in state 'finished'
[2026-01-09 21:45:09] 2026-01-10 02:44:06,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:45:09] 2026-01-10 02:44:06,848 | INFO     | sum of deviations: 49968636890.54196
[2026-01-09 21:45:09] 2026-01-10 02:44:06,849 | INFO     | mean x: 1767968025.748304
[2026-01-09 21:45:09] 2026-01-10 02:44:06,849 | INFO     | mean y: 2608719.316824966
[2026-01-09 21:45:09] 2026-01-10 02:44:06,849 | INFO     | intersect: -86353380.47159109
[2026-01-09 21:45:09] 2026-01-10 02:44:06,851 | INFO     | chi2: 1.0314194043338212
[2026-01-09 21:45:09] 2026-01-10 02:44:06,851 | INFO     | current chi2=1.0314194043338212 (change=66.54876149030868 %)
[2026-01-09 21:45:09] 2026-01-10 02:44:06,859 | INFO     | sum of square deviations: 982968884708.3062
[2026-01-09 21:45:09] 2026-01-10 02:44:07,066 | INFO     | sum of deviations: -5281469450.469757
[2026-01-09 21:45:09] 2026-01-10 02:44:07,066 | INFO     | mean x: 1767968178.2484684
[2026-01-09 21:45:09] 2026-01-10 02:44:07,067 | INFO     | mean y: 2609555.1245745406
[2026-01-09 21:45:09] 2026-01-10 02:44:07,067 | INFO     | intersect: 12108807.916887319
[2026-01-09 21:45:09] 2026-01-10 02:44:07,069 | INFO     | chi2: 0.9767499552520835
[2026-01-09 21:45:09] 2026-01-10 02:44:07,069 | INFO     | current chi2=0.9767499552520835 (change=5.3004092081288565 %)
[2026-01-09 21:45:09] 2026-01-10 02:44:07,069 | INFO     | left removable region: 20
[2026-01-09 21:45:09] 2026-01-10 02:44:07,075 | INFO     | sum of square deviations: 951198984003.3092
[2026-01-09 21:45:09] 2026-01-10 02:44:07,200 | INFO     | sum of deviations: 129154568058.15009
[2026-01-09 21:45:09] 2026-01-10 02:44:07,200 | INFO     | mean x: 1767968300.2512045
[2026-01-09 21:45:09] 2026-01-10 02:44:07,201 | INFO     | mean y: 2610352.0571231935
[2026-01-09 21:45:09] 2026-01-10 02:44:07,201 | INFO     | intersect: -237445814.94846702
[2026-01-09 21:45:09] 2026-01-10 02:44:07,203 | INFO     | chi2: 0.2239701197650963
[2026-01-09 21:45:09] 2026-01-10 02:44:07,203 | INFO     | current memory leak: 0.14 B/s (using 1453 data points, chi2=0.22)
[2026-01-09 21:45:09] 2026-01-10 02:44:07,209 | INFO     | could have reported an average CPU frequency of 2899 MHz (52 samples)
[2026-01-09 21:45:09] 2026-01-10 02:44:07,209 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2026-01-09 21:45:09] 2026-01-10 02:44:07,209 | INFO     | ..............................
[2026-01-09 21:45:09] 2026-01-10 02:44:07,209 | INFO     | . Timing measurements:
[2026-01-09 21:45:09] 2026-01-10 02:44:07,210 | INFO     | . get job = 1 s
[2026-01-09 21:45:09] 2026-01-10 02:44:07,210 | INFO     | . initial setup = 4 s
[2026-01-09 21:45:09] 2026-01-10 02:44:07,210 | INFO     | . payload setup = 11 s
[2026-01-09 21:45:09] 2026-01-10 02:44:07,210 | INFO     | . stage-in = 1 s
[2026-01-09 21:45:09] 2026-01-10 02:44:07,210 | INFO     | . payload execution = 90227 s
[2026-01-09 21:45:09] 2026-01-10 02:44:07,210 | INFO     | . stage-out = 5 s
[2026-01-09 21:45:09] 2026-01-10 02:44:07,211 | INFO     | . log creation = 1 s
[2026-01-09 21:45:09] 2026-01-10 02:44:07,211 | INFO     | ..............................
[2026-01-09 21:45:09] 2026-01-10 02:44:07,879 | INFO     | 
[2026-01-09 21:45:09] 2026-01-10 02:44:07,879 | INFO     | job summary report
[2026-01-09 21:45:09] 2026-01-10 02:44:07,880 | INFO     | --------------------------------------------------
[2026-01-09 21:45:09] 2026-01-10 02:44:07,880 | INFO     | PanDA job id: 6963155918
[2026-01-09 21:45:09] 2026-01-10 02:44:07,880 | INFO     | task id: 47898826
[2026-01-09 21:45:09] 2026-01-10 02:44:07,880 | INFO     | errors: (none)
[2026-01-09 21:45:09] 2026-01-10 02:44:07,880 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:45:09] 2026-01-10 02:44:07,880 | INFO     | pilot state: finished 
[2026-01-09 21:45:09] 2026-01-10 02:44:07,881 | INFO     | transexitcode: 0
[2026-01-09 21:45:09] 2026-01-10 02:44:07,881 | INFO     | exeerrorcode: 0
[2026-01-09 21:45:09] 2026-01-10 02:44:07,881 | INFO     | exeerrordiag: 
[2026-01-09 21:45:09] 2026-01-10 02:44:07,881 | INFO     | exitcode: 0
[2026-01-09 21:45:09] 2026-01-10 02:44:07,881 | INFO     | exitmsg: OK
[2026-01-09 21:45:09] 2026-01-10 02:44:07,881 | INFO     | cpuconsumptiontime: 108102 s
[2026-01-09 21:45:09] 2026-01-10 02:44:07,881 | INFO     | nevents: 400
[2026-01-09 21:45:09] 2026-01-10 02:44:07,882 | INFO     | neventsw: 0
[2026-01-09 21:45:09] 2026-01-10 02:44:07,882 | INFO     | pid: 1452325
[2026-01-09 21:45:09] 2026-01-10 02:44:07,882 | INFO     | pgrp: 1452325
[2026-01-09 21:45:09] 2026-01-10 02:44:07,882 | INFO     | corecount: 10
[2026-01-09 21:45:09] 2026-01-10 02:44:07,882 | INFO     | event service: False
[2026-01-09 21:45:09] 2026-01-10 02:44:07,882 | INFO     | sizes: {0: 2283742, 1: 2283997, 2: 2283997, 14: 2284025, 15: 2284315, 24: 2284343, 90244: 2347920, 90245: 2347919, 90252: 2356973, 90255: 2357029, 90283: 2357223}
[2026-01-09 21:45:09] 2026-01-10 02:44:07,883 | INFO     | --------------------------------------------------
[2026-01-09 21:45:09] 2026-01-10 02:44:07,883 | INFO     | 
[2026-01-09 21:45:09] 2026-01-10 02:44:07,883 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:45:09] 2026-01-10 02:44:07,931 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,932 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,932 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,932 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,939 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:45:09] 2026-01-10 02:44:07,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,939 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:45:09] 2026-01-10 02:44:07,939 | INFO     | job 6963155918 has completed (purged errors)
[2026-01-09 21:45:09] 2026-01-10 02:44:07,939 | INFO     | overall cleanup function is called
[2026-01-09 21:45:09] 2026-01-10 02:44:08,951 | INFO     | --- collectZombieJob: --- 10, [1452325]
[2026-01-09 21:45:09] 2026-01-10 02:44:08,951 | INFO     | zombie collector waiting for pid 1452325
[2026-01-09 21:45:09] 2026-01-10 02:44:08,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:45:09] 2026-01-10 02:44:08,951 | INFO     | collected zombie processes
[2026-01-09 21:45:09] 2026-01-10 02:44:08,952 | INFO     | will attempt to kill all subprocesses of pid=1452325
[2026-01-09 21:45:09] 2026-01-10 02:44:09,531 | INFO     | process IDs to be killed: [1452325] (in reverse order)
[2026-01-09 21:45:09] 2026-01-10 02:44:09,738 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:45:09] 2026-01-10 02:44:09,738 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:45:09] 2026-01-10 02:44:09,765 | INFO     | did not find any defunct processes belonging to 1452325
[2026-01-09 21:45:09] 2026-01-10 02:44:09,794 | INFO     | did not find any defunct processes belonging to 1452325
[2026-01-09 21:45:09] 2026-01-10 02:44:09,795 | INFO     | ready for new job
[2026-01-09 21:45:09] 2026-01-10 02:44:09,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:45:09] 2026-01-10 02:44:09,810 | INFO     | ***************************************
[2026-01-09 21:45:09] 2026-01-10 02:44:09,810 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:45:09] 2026-01-10 02:44:09,810 | INFO     | ***************************************
[2026-01-09 21:45:09] 2026-01-10 02:44:09,811 | INFO     | 
[2026-01-09 21:45:09] 2026-01-10 02:44:09,813 | INFO     | architecture information:
[2026-01-09 21:45:09] 2026-01-10 02:44:09,813 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:45:09] 2026-01-10 02:44:09,841 | INFO     | cat /etc/os-release:
[2026-01-09 21:45:09] NAME="CentOS Linux"
[2026-01-09 21:45:09] VERSION="7 (Core)"
[2026-01-09 21:45:09] ID="centos"
[2026-01-09 21:45:09] ID_LIKE="rhel fedora"
[2026-01-09 21:45:09] VERSION_ID="7"
[2026-01-09 21:45:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:45:09] ANSI_COLOR="0;31"
[2026-01-09 21:45:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:45:09] HOME_URL="https://www.centos.org/"
[2026-01-09 21:45:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:45:09] 
[2026-01-09 21:45:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:45:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:45:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:45:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:45:09] 
[2026-01-09 21:45:09] 2026-01-10 02:44:09,841 | INFO     | ***************************************
[2026-01-09 21:45:09] 2026-01-10 02:44:10,345 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:45:09] 2026-01-10 02:44:10,473 | INFO     | sufficient remaining disk space (52572454912 B)
[2026-01-09 21:45:09] 2026-01-10 02:44:10,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:45:09] 2026-01-10 02:44:10,474 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:45:09] 2026-01-10 02:44:10,474 | INFO     | update_server=False
[2026-01-09 21:45:09] 2026-01-10 02:44:10,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:45:09] 2026-01-10 02:44:10,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:45:09] 2026-01-10 02:44:10,474 | INFO     | aborting loop
[2026-01-09 21:45:09] 2026-01-10 02:44:10,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:45:09] 2026-01-10 02:44:10,642 | INFO     | all data control threads have been joined
[2026-01-09 21:45:09] 2026-01-10 02:44:11,145 | INFO     | all job control threads have been joined
[2026-01-09 21:45:09] 2026-01-10 02:44:11,479 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:11,483 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:11,524 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:11,650 | INFO     | [data] control thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:11,856 | INFO     | all payload control threads have been joined
[2026-01-09 21:45:09] 2026-01-10 02:44:11,980 | INFO     | [job] validate thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:12,044 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:12,151 | INFO     | [job] control thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:12,486 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:12,530 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:12,538 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:12,615 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:12,681 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:12,862 | INFO     | [payload] control thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:12,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:45:09] 2026-01-10 02:44:12,923 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:13,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:45:09] 2026-01-10 02:44:13,900 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:17,077 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:45:09] 2026-01-10 02:44:39,818 | INFO     | PID=1445563 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:45:09] 2026-01-10 02:44:39,818 | INFO     | .. there are 8 such processes running
[2026-01-09 21:45:09] 2026-01-10 02:44:39,824 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:45:09] 2026-01-10 02:44:39,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:45:09] 2026-01-10 02:44:39,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:45:09] 2026-01-10 02:45:00,977 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:45:09] 2026-01-10 02:45:02,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661392516928)>', '<ExcThread(monitor, started 139660844062464)>']
[2026-01-09 21:45:09] 2026-01-10 02:45:02,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:45:09] 2026-01-10 02:45:02,987 | INFO     | [monitor] control thread has ended
[2026-01-09 21:45:09] 2026-01-10 02:45:07,465 | INFO     | all workflow threads have been joined
[2026-01-09 21:45:09] 2026-01-10 02:45:07,465 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:45:09] 2026-01-10 02:45:07,465 | INFO     | traces error code: 0
[2026-01-09 21:45:09] 2026-01-10 02:45:07,466 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:45:09] 2026-01-10 02:45:08,809 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:45:09] 2026-01-10 02:45:08,818 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:45:09] 2026-01-10 02:45:08,821 [wrapper] pilotpid: 1445563
[2026-01-09 21:45:09] 2026-01-10 02:45:08,824 [wrapper] Pilot exit status: 0
[2026-01-09 21:45:09] 2026-01-10 02:45:08,958 [wrapper] pandaids: 6963155918
[2026-01-09 21:45:09] 2026-01-10 02:45:09,040 [wrapper] cleanup supervisor_pilot 3925041 1445564
[2026-01-09 21:45:09] 2026-01-10 02:45:09,043 [wrapper] Test setup, not cleaning
[2026-01-09 21:45:09] 2026-01-10 02:45:09,047 [wrapper] apfmon messages muted
[2026-01-09 21:45:09] 2026-01-10 02:45:09,049 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:45:09] 2026-01-10 02:45:09,052 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:45:09]  *** Error codes and diagnostics ***
[2026-01-09 21:45:09]     "exeErrorCode": 0,
[2026-01-09 21:45:09]     "exeErrorDiag": "",
[2026-01-09 21:45:09]     "pilotErrorCode": 0,
[2026-01-09 21:45:09]     "pilotErrorDiag": "",
[2026-01-09 21:45:09]  *** Listing of results directory ***
[2026-01-09 21:45:09] total 462288
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 21:45:09] -rwx------. 1 boincer umatlas     36322 Jan  8 14:09 runpilot2-wrapper.sh
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:11 queuedata.json
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas       100 Jan  8 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:45:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 20:38 run_atlas
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas       105 Jan  8 20:38 job.xml
[2026-01-09 21:45:09] -rw-r--r--. 2 boincer umatlas 225099948 Jan  8 20:38 EVNT.47898824._000885.pool.root.1
[2026-01-09 21:45:09] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:38 start_atlas.sh
[2026-01-09 21:45:09] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 20:38 shared
[2026-01-09 21:45:09] -rw-r--r--. 2 boincer umatlas    592397 Jan  8 20:38 input.tar.gz
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas         0 Jan  8 20:38 boinc_lockfile
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 20:38 pandaJob.out
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas        57 Jan  8 20:38 setup.sh.local
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas    989821 Jan  8 20:38 agis_schedconf.cvmfs.json
[2026-01-09 21:45:09] drwx------. 5 boincer umatlas      4096 Jan  8 20:38 pilot3
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas      6525 Jan  9 21:39 init_data.xml
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas 221895737 Jan  9 21:41 HITS.47898826._031139.pool.root.1
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas       532 Jan  9 21:42 boinc_task_state.xml
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas      1039 Jan  9 21:43 memory_monitor_summary.json
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:43 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas   1339417 Jan  9 21:43 log.47898826._031139.job.log.tgz.1
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas      7822 Jan  9 21:44 heartbeat.json
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas        95 Jan  9 21:44 pilot_heartbeat.json
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas      4823 Jan  9 21:45 pilotlog.txt
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas   9893375 Jan  9 21:45 log.47898826._031139.job.log.1
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:45 boinc_mmap_file
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas        29 Jan  9 21:45 wrapper_checkpoint.txt
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas       357 Jan  9 21:45 output.list
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:45 runtime_log
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas  11253760 Jan  9 21:45 result.tar.gz
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas      9345 Jan  9 21:45 runtime_log.err
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas       660 Jan  9 21:45 L1BNDmaZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm66fKDmXZeebm.diag
[2026-01-09 21:45:09] -rw-r--r--. 1 boincer umatlas     21475 Jan  9 21:45 stderr.txt
[2026-01-09 21:45:09] HITS file was successfully produced:
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas 221895737 Jan  9 21:41 shared/HITS.pool.root.1
[2026-01-09 21:45:09]  *** Contents of shared directory: ***
[2026-01-09 21:45:09] total 448116
[2026-01-09 21:45:09] -rw-r--r--. 2 boincer umatlas 225099948 Jan  8 20:38 ATLAS.root_0
[2026-01-09 21:45:09] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:38 start_atlas.sh
[2026-01-09 21:45:09] -rw-r--r--. 2 boincer umatlas    592397 Jan  8 20:38 input.tar.gz
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas 221895737 Jan  9 21:41 HITS.pool.root.1
[2026-01-09 21:45:09] -rw-------. 1 boincer umatlas  11253760 Jan  9 21:45 result.tar.gz
21:45:11 (1439811): run_atlas exited; CPU time 111082.879168
21:45:11 (1439811): called boinc_finish(0)

</stderr_txt>
]]>

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