Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:43:20 (3593674): wrapper (7.7.26015): starting
16:43:20 (3593674): wrapper: running run_atlas (--nthreads 2)
[2026-01-09 16:43:20] Arguments: --nthreads 2
[2026-01-09 16:43:20] Threads: 2
[2026-01-09 16:43:20] Checking for CVMFS
[2026-01-09 16:43:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:43:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:43:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:43:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:43:21] 2.9.2.0 3288549 1280 55780 154948 3 57 19803543 36864001 0 130560 0 607509 99.986 46379 3229 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 16:43:21] CVMFS is ok
[2026-01-09 16:43:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:43:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:43:21] Further information can be found at the LHC@home message board.
[2026-01-09 16:43:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:43:21] Checking for apptainer binary...
[2026-01-09 16:43:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:43:21] Running /usr/bin/apptainer --version
[2026-01-09 16:43:21] apptainer version 1.4.1-1.1
[2026-01-09 16:43:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:43:21] thA369
[2026-01-09 16:43:21] apptainer works
[2026-01-09 16:43:21] Set ATHENA_PROC_NUMBER=2
[2026-01-09 16:43:21] Set ATHENA_CORE_NUMBER=2
[2026-01-09 16:43:21] Starting ATLAS job with PandaID=6963155610
[2026-01-09 16:43:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:43:56]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:43:56] 2026-01-09 18:42:51,285 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:51,304 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:51,477 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:51,531 | INFO     | [payload] control thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:51,647 | INFO     | [job] control thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:51,752 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:51,817 | INFO     | [data] control thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:51,984 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:52,212 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:52,285 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:52,445 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:52,598 | INFO     | [job] validate thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:52,632 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:52,711 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:42:53,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:43:56] 2026-01-09 18:42:57,082 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:43:56] 2026-01-09 18:43:20,532 | INFO     | PID=3597388 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:43:56] 2026-01-09 18:43:20,532 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:43:56] 2026-01-09 18:43:20,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:43:56] 2026-01-09 18:43:20,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:43:56] 2026-01-09 18:43:31,705 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-01-09 19:43:56] 2026-01-09 18:43:50,083 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:43:56] 2026-01-09 18:43:50,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462248650560)>', '<ExcThread(monitor, started 140461385701120)>']
[2026-01-09 19:43:56] 2026-01-09 18:43:51,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:43:56] 2026-01-09 18:43:51,684 | INFO     | [monitor] control thread has ended
[2026-01-09 19:43:56] 2026-01-09 18:43:55,918 | INFO     | all workflow threads have been joined
[2026-01-09 19:43:56] 2026-01-09 18:43:55,919 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:43:56] 2026-01-09 18:43:55,919 | INFO     | traces error code: 0
[2026-01-09 19:43:56] 2026-01-09 18:43:55,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:43:56] 2026-01-09 18:43:55,968 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:43:56] 2026-01-09 18:43:55,970 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:43:56] 2026-01-09 18:43:55,972 [wrapper] pilotpid: 3597388
[2026-01-09 19:43:56] 2026-01-09 18:43:55,974 [wrapper] Pilot exit status: 0
[2026-01-09 19:43:56] 2026-01-09 18:43:55,980 [wrapper] pandaids: 6963155610
[2026-01-09 19:43:56] 2026-01-09 18:43:56,002 [wrapper] cleanup supervisor_pilot 3632158 3597389
[2026-01-09 19:43:56] 2026-01-09 18:43:56,004 [wrapper] Test setup, not cleaning
[2026-01-09 19:43:56] 2026-01-09 18:43:56,006 [wrapper] apfmon messages muted
[2026-01-09 19:43:56] 2026-01-09 18:43:56,008 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:43:56] 2026-01-09 18:43:56,011 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:43:56]  *** Error codes and diagnostics ***
[2026-01-09 19:43:56]     "exeErrorCode": 0,
[2026-01-09 19:43:56]     "exeErrorDiag": "",
[2026-01-09 19:43:56]     "pilotErrorCode": 0,
[2026-01-09 19:43:56]     "pilotErrorDiag": "",
[2026-01-09 19:43:56]  *** Listing of results directory ***
[2026-01-09 19:43:56] total 439140
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 19:43:56] -rwx------ 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc       100 Jan  9 16:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:43:56] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 16:43 run_atlas
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc       105 Jan  9 16:43 job.xml
[2026-01-09 19:43:56] -rw-r--r-- 2 boinc boinc 223926495 Jan  9 16:43 EVNT.47898824._001194.pool.root.1
[2026-01-09 19:43:56] drwxrwx--x 2 boinc boinc      4096 Jan  9 16:43 shared
[2026-01-09 19:43:56] -rw-r--r-- 2 boinc boinc    592399 Jan  9 16:43 input.tar.gz
[2026-01-09 19:43:56] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:43 start_atlas.sh
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:43 boinc_setup_complete
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc      6205 Jan  9 16:43 init_data.xml
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:43 boinc_lockfile
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc      2520 Jan  9 16:43 pandaJob.out
[2026-01-09 19:43:56] -rw------- 1 boinc boinc    989377 Jan  9 16:43 agis_schedconf.cvmfs.json
[2026-01-09 19:43:56] -rw------- 1 boinc boinc   1516240 Jan  9 16:43 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:43:56] drwx------ 5 boinc boinc      4096 Jan  9 16:43 pilot3
[2026-01-09 19:43:56] -rw------- 1 boinc boinc 218185397 Jan  9 19:42 HITS.47898826._030832.pool.root.1
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc       531 Jan  9 19:42 boinc_task_state.xml
[2026-01-09 19:43:56] -rw------- 1 boinc boinc      1017 Jan  9 19:42 memory_monitor_summary.json
[2026-01-09 19:43:56] -rw------- 1 boinc boinc    314194 Jan  9 19:42 log.47898826._030832.job.log.tgz.1
[2026-01-09 19:43:56] -rw------- 1 boinc boinc        95 Jan  9 19:42 pilot_heartbeat.json
[2026-01-09 19:43:56] -rw------- 1 boinc boinc      7756 Jan  9 19:42 heartbeat.json
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc        28 Jan  9 19:43 wrapper_checkpoint.txt
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc      8192 Jan  9 19:43 boinc_mmap_file
[2026-01-09 19:43:56] -rw------- 1 boinc boinc      4938 Jan  9 19:43 pilotlog.txt
[2026-01-09 19:43:56] -rw------- 1 boinc boinc   1519683 Jan  9 19:43 log.47898826._030832.job.log.1
[2026-01-09 19:43:56] -rw------- 1 boinc boinc       357 Jan  9 19:43 output.list
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc       620 Jan  9 19:43 runtime_log
[2026-01-09 19:43:56] -rw------- 1 boinc boinc   1853440 Jan  9 19:43 result.tar.gz
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc      8898 Jan  9 19:43 runtime_log.err
[2026-01-09 19:43:56] -rw------- 1 boinc boinc       662 Jan  9 19:43 7fpLDmPZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmK6fKDmQ13sGm.diag
[2026-01-09 19:43:56] -rw-r--r-- 1 boinc boinc      6432 Jan  9 19:43 stderr.txt
[2026-01-09 19:43:56] HITS file was successfully produced:
[2026-01-09 19:43:56] -rw------- 1 boinc boinc 218185397 Jan  9 19:42 shared/HITS.pool.root.1
[2026-01-09 19:43:56]  *** Contents of shared directory: ***
[2026-01-09 19:43:56] total 434168
[2026-01-09 19:43:56] -rw-r--r-- 2 boinc boinc 223926495 Jan  9 16:43 ATLAS.root_0
[2026-01-09 19:43:56] -rw-r--r-- 2 boinc boinc    592399 Jan  9 16:43 input.tar.gz
[2026-01-09 19:43:56] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:43 start_atlas.sh
[2026-01-09 19:43:56] -rw------- 1 boinc boinc 218185397 Jan  9 19:42 HITS.pool.root.1
[2026-01-09 19:43:56] -rw------- 1 boinc boinc   1853440 Jan  9 19:43 result.tar.gz
19:43:57 (3593674): run_atlas exited; CPU time 21185.301220
19:43:57 (3593674): called boinc_finish(0)

</stderr_txt>
]]>

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