Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:55:56 (25767): wrapper (7.7.26015): starting
06:55:56 (25767): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:55:56] Arguments: --nthreads 8
[2026-01-09 06:55:56] Threads: 8
[2026-01-09 06:55:56] Checking for CVMFS
[2026-01-09 06:55:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:55:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:55:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:55:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:55:57] 2.11.2.0 15174 35005 95792 154933 0 57 13018839 25165824 0 130560 0 16123038 99.882 7409772 3723 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 06:55:57] CVMFS is ok
[2026-01-09 06:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:55:57] Checking for apptainer binary...
[2026-01-09 06:55:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:55:57] Running /usr/bin/apptainer --version
[2026-01-09 06:55:57] apptainer version 1.3.2-1.el7
[2026-01-09 06:55:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:55:58] cg-vwn376.simple-grid.lan
[2026-01-09 06:55:58] apptainer works
[2026-01-09 06:55:58] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:55:58] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:55:58] Starting ATLAS job with PandaID=6963155762
[2026-01-09 06:55:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:40:38]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:40:38] 2026-01-09 08:39:49,768 | INFO     | monitor loop #671: job 0:6963155762 is in state 'finished'
[2026-01-09 09:40:38] 2026-01-09 08:39:49,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:40:38] 2026-01-09 08:39:50,920 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 09:40:38] 2026-01-09 08:39:50,921 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 09:40:38] 2026-01-09 08:39:50,923 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6963155762/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:40:38] 2026-01-09 08:39:50,924 | INFO     | extracted standard info from prmon json
[2026-01-09 09:40:38] 2026-01-09 08:39:50,924 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:40:38] 2026-01-09 08:39:50,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:40:38] 2026-01-09 08:39:50,925 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:40:38] 2026-01-09 08:39:50,925 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:40:38] 2026-01-09 08:39:50,929 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:40:38] 2026-01-09 08:39:50,929 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 09:40:38] 2026-01-09 08:39:50,931 | INFO     | sum of deviations: 5861745528.999996
[2026-01-09 09:40:38] 2026-01-09 08:39:50,931 | INFO     | mean x: 1767943090.0
[2026-01-09 09:40:38] 2026-01-09 08:39:50,931 | INFO     | mean y: 2475192.51552795
[2026-01-09 09:40:38] 2026-01-09 08:39:50,931 | INFO     | intersect: -8006112670.590737
[2026-01-09 09:40:38] 2026-01-09 08:39:50,931 | INFO     | chi2: 2.3214338420966345
[2026-01-09 09:40:38] 2026-01-09 08:39:50,932 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 09:40:38] 2026-01-09 08:39:50,933 | INFO     | sum of deviations: 16045346365.000002
[2026-01-09 09:40:38] 2026-01-09 08:39:50,933 | INFO     | mean x: 1767942937.5
[2026-01-09 09:40:38] 2026-01-09 08:39:50,933 | INFO     | mean y: 2488132.564102564
[2026-01-09 09:40:38] 2026-01-09 08:39:50,933 | INFO     | intersect: -24095621015.287853
[2026-01-09 09:40:38] 2026-01-09 08:39:50,934 | INFO     | chi2: 1.557215823112497
[2026-01-09 09:40:38] 2026-01-09 08:39:50,934 | INFO     | current chi2=1.557215823112497 (change=32.92008607464443 %)
[2026-01-09 09:40:38] 2026-01-09 08:39:50,934 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 09:40:38] 2026-01-09 08:39:50,935 | INFO     | sum of deviations: 15402327796.999979
[2026-01-09 09:40:38] 2026-01-09 08:39:50,935 | INFO     | mean x: 1767942785.0
[2026-01-09 09:40:38] 2026-01-09 08:39:50,935 | INFO     | mean y: 2487237.8278145697
[2026-01-09 09:40:38] 2026-01-09 08:39:50,935 | INFO     | intersect: -25504804519.16853
[2026-01-09 09:40:38] 2026-01-09 08:39:50,936 | INFO     | chi2: 1.5589615354231634
[2026-01-09 09:40:38] 2026-01-09 08:39:50,936 | INFO     | current chi2=1.5589615354231634 (change=-0.11210471180398619 %)
[2026-01-09 09:40:38] 2026-01-09 08:39:50,936 | INFO     | right removable region: 150
[2026-01-09 09:40:38] 2026-01-09 08:39:50,936 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 09:40:38] 2026-01-09 08:39:50,937 | INFO     | sum of deviations: -17857700193.5
[2026-01-09 09:40:38] 2026-01-09 08:39:50,938 | INFO     | mean x: 1767943242.5
[2026-01-09 09:40:38] 2026-01-09 08:39:50,938 | INFO     | mean y: 2505685.1346153845
[2026-01-09 09:40:38] 2026-01-09 08:39:50,938 | INFO     | intersect: 26822548882.93339
[2026-01-09 09:40:38] 2026-01-09 08:39:50,938 | INFO     | chi2: 0.8854368909712581
[2026-01-09 09:40:38] 2026-01-09 08:39:50,938 | INFO     | current chi2=0.8854368909712581 (change=61.8581897569149 %)
[2026-01-09 09:40:38] 2026-01-09 08:39:50,939 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 09:40:38] 2026-01-09 08:39:50,940 | INFO     | sum of deviations: -17209072218.0
[2026-01-09 09:40:38] 2026-01-09 08:39:50,940 | INFO     | mean x: 1767943395.0
[2026-01-09 09:40:38] 2026-01-09 08:39:50,940 | INFO     | mean y: 2504708.2450331124
[2026-01-09 09:40:38] 2026-01-09 08:39:50,940 | INFO     | intersect: 28501896694.44743
[2026-01-09 09:40:38] 2026-01-09 08:39:50,940 | INFO     | chi2: 0.8705562763272294
[2026-01-09 09:40:38] 2026-01-09 08:39:50,941 | INFO     | current chi2=0.8705562763272294 (change=1.6805957370610292 %)
[2026-01-09 09:40:38] 2026-01-09 08:39:50,941 | INFO     | left removable region: 20
[2026-01-09 09:40:38] 2026-01-09 08:39:50,941 | INFO     | sum of square deviations: 681212772.5
[2026-01-09 09:40:38] 2026-01-09 08:39:50,942 | INFO     | sum of deviations: 2108969348.0
[2026-01-09 09:40:38] 2026-01-09 08:39:50,942 | INFO     | mean x: 1767943364.5
[2026-01-09 09:40:38] 2026-01-09 08:39:50,942 | INFO     | mean y: 2503737.3384615383
[2026-01-09 09:40:38] 2026-01-09 08:39:50,942 | INFO     | intersect: -5470879198.578952
[2026-01-09 09:40:38] 2026-01-09 08:39:50,943 | INFO     | chi2: 0.0001518099585895563
[2026-01-09 09:40:38] 2026-01-09 08:39:50,943 | INFO     | current memory leak: 3.10 B/s (using 130 data points, chi2=0.00)
[2026-01-09 09:40:38] 2026-01-09 08:39:50,943 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 09:40:38] 2026-01-09 08:39:50,943 | INFO     | ..............................
[2026-01-09 09:40:38] 2026-01-09 08:39:50,944 | INFO     | . Timing measurements:
[2026-01-09 09:40:38] 2026-01-09 08:39:50,944 | INFO     | . get job = 0 s
[2026-01-09 09:40:38] 2026-01-09 08:39:50,944 | INFO     | . initial setup = 1 s
[2026-01-09 09:40:38] 2026-01-09 08:39:50,944 | INFO     | . payload setup = 8 s
[2026-01-09 09:40:38] 2026-01-09 08:39:50,944 | INFO     | . stage-in = 0 s
[2026-01-09 09:40:38] 2026-01-09 08:39:50,944 | INFO     | . payload execution = 9777 s
[2026-01-09 09:40:38] 2026-01-09 08:39:50,944 | INFO     | . stage-out = 1 s
[2026-01-09 09:40:38] 2026-01-09 08:39:50,944 | INFO     | . log creation = 0 s
[2026-01-09 09:40:38] 2026-01-09 08:39:50,944 | INFO     | ..............................
[2026-01-09 09:40:38] 2026-01-09 08:39:51,060 | INFO     | 
[2026-01-09 09:40:38] 2026-01-09 08:39:51,060 | INFO     | job summary report
[2026-01-09 09:40:38] 2026-01-09 08:39:51,060 | INFO     | --------------------------------------------------
[2026-01-09 09:40:38] 2026-01-09 08:39:51,060 | INFO     | PanDA job id: 6963155762
[2026-01-09 09:40:38] 2026-01-09 08:39:51,061 | INFO     | task id: 47898826
[2026-01-09 09:40:38] 2026-01-09 08:39:51,061 | INFO     | errors: (none)
[2026-01-09 09:40:38] 2026-01-09 08:39:51,061 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:40:38] 2026-01-09 08:39:51,061 | INFO     | pilot state: finished 
[2026-01-09 09:40:38] 2026-01-09 08:39:51,061 | INFO     | transexitcode: 0
[2026-01-09 09:40:38] 2026-01-09 08:39:51,061 | INFO     | exeerrorcode: 0
[2026-01-09 09:40:38] 2026-01-09 08:39:51,061 | INFO     | exeerrordiag: 
[2026-01-09 09:40:38] 2026-01-09 08:39:51,061 | INFO     | exitcode: 0
[2026-01-09 09:40:38] 2026-01-09 08:39:51,061 | INFO     | exitmsg: OK
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | cpuconsumptiontime: 73328 s
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | nevents: 400
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | neventsw: 0
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | pid: 3546
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | pgrp: 3546
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | corecount: 8
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | event service: False
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | sizes: {0: 2283801, 1: 2284000, 6: 2284262, 11: 2284290, 9789: 2312589, 9790: 2321589, 9791: 2321773, 9798: 2321967}
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | --------------------------------------------------
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | 
[2026-01-09 09:40:38] 2026-01-09 08:39:51,062 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-09 09:40:38] 2026-01-09 08:39:51,102 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,102 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,102 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,102 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,102 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,103 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,103 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,103 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,103 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,103 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,104 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,104 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,104 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:40:38] 2026-01-09 08:39:51,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,104 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:40:38] 2026-01-09 08:39:51,104 | INFO     | job 6963155762 has completed (purged errors)
[2026-01-09 09:40:38] 2026-01-09 08:39:51,105 | INFO     | overall cleanup function is called
[2026-01-09 09:40:38] 2026-01-09 08:39:52,113 | INFO     | --- collectZombieJob: --- 10, [3546]
[2026-01-09 09:40:38] 2026-01-09 08:39:52,113 | INFO     | zombie collector waiting for pid 3546
[2026-01-09 09:40:38] 2026-01-09 08:39:52,113 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:40:38] 2026-01-09 08:39:52,113 | INFO     | collected zombie processes
[2026-01-09 09:40:38] 2026-01-09 08:39:52,113 | INFO     | will attempt to kill all subprocesses of pid=3546
[2026-01-09 09:40:38] 2026-01-09 08:39:52,177 | INFO     | process IDs to be killed: [3546] (in reverse order)
[2026-01-09 09:40:38] 2026-01-09 08:39:52,227 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:40:38] 2026-01-09 08:39:52,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:40:38] 2026-01-09 08:39:52,230 | INFO     | did not find any defunct processes belonging to 3546
[2026-01-09 09:40:38] 2026-01-09 08:39:52,232 | INFO     | did not find any defunct processes belonging to 3546
[2026-01-09 09:40:38] 2026-01-09 08:39:52,232 | INFO     | ready for new job
[2026-01-09 09:40:38] 2026-01-09 08:39:52,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:40:38] 2026-01-09 08:39:52,234 | INFO     | ***************************************
[2026-01-09 09:40:38] 2026-01-09 08:39:52,234 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:40:38] 2026-01-09 08:39:52,234 | INFO     | ***************************************
[2026-01-09 09:40:38] 2026-01-09 08:39:52,235 | INFO     | 
[2026-01-09 09:40:38] 2026-01-09 08:39:52,235 | INFO     | pilot is running in a VM
[2026-01-09 09:40:38] 2026-01-09 08:39:52,235 | INFO     | architecture information:
[2026-01-09 09:40:38] 2026-01-09 08:39:52,236 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:40:38] 2026-01-09 08:39:52,264 | INFO     | cat /etc/os-release:
[2026-01-09 09:40:38] NAME="CentOS Linux"
[2026-01-09 09:40:38] VERSION="7 (Core)"
[2026-01-09 09:40:38] ID="centos"
[2026-01-09 09:40:38] ID_LIKE="rhel fedora"
[2026-01-09 09:40:38] VERSION_ID="7"
[2026-01-09 09:40:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:40:38] ANSI_COLOR="0;31"
[2026-01-09 09:40:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:40:38] HOME_URL="https://www.centos.org/"
[2026-01-09 09:40:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:40:38] 
[2026-01-09 09:40:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:40:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:40:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:40:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:40:38] 
[2026-01-09 09:40:38] 2026-01-09 08:39:52,264 | INFO     | ***************************************
[2026-01-09 09:40:38] 2026-01-09 08:39:52,767 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-09 09:40:38] 2026-01-09 08:39:52,800 | INFO     | sufficient remaining disk space (498114494464 B)
[2026-01-09 09:40:38] 2026-01-09 08:39:52,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:40:38] 2026-01-09 08:39:52,800 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:40:38] 2026-01-09 08:39:52,801 | INFO     | update_server=False
[2026-01-09 09:40:38] 2026-01-09 08:39:52,801 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:40:38] 2026-01-09 08:39:52,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:40:38] 2026-01-09 08:39:53,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:40:38] 2026-01-09 08:39:53,276 | INFO     | aborting loop
[2026-01-09 09:40:38] 2026-01-09 08:39:53,505 | INFO     | all data control threads have been joined
[2026-01-09 09:40:38] 2026-01-09 08:39:53,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:40:38] 2026-01-09 08:39:53,617 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:40:38] 2026-01-09 08:39:53,806 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:53,807 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:54,046 | INFO     | all payload control threads have been joined
[2026-01-09 09:40:38] 2026-01-09 08:39:54,059 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:54,222 | INFO     | all job control threads have been joined
[2026-01-09 09:40:38] 2026-01-09 08:39:54,281 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:54,511 | INFO     | [data] control thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:54,528 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:54,633 | INFO     | [job] validate thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:54,688 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:54,738 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:54,915 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:54,994 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:55,046 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:55,052 | INFO     | [payload] control thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:55,228 | INFO     | [job] control thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:55,514 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:39:57,624 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:40:38] 2026-01-09 08:40:22,851 | INFO     | PID=29495 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:40:38] 2026-01-09 08:40:22,852 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:40:38] 2026-01-09 08:40:22,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:40:38] 2026-01-09 08:40:22,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:40:38] 2026-01-09 08:40:31,288 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:40:38] 2026-01-09 08:40:33,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301708846912)>', '<ExcThread(monitor, started 140301104555776)>']
[2026-01-09 09:40:38] 2026-01-09 08:40:33,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:40:38] 2026-01-09 08:40:33,910 | INFO     | [monitor] control thread has ended
[2026-01-09 09:40:38] 2026-01-09 08:40:38,222 | INFO     | all workflow threads have been joined
[2026-01-09 09:40:38] 2026-01-09 08:40:38,222 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:40:38] 2026-01-09 08:40:38,222 | INFO     | traces error code: 0
[2026-01-09 09:40:38] 2026-01-09 08:40:38,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:40:38] 2026-01-09 08:40:38,377 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:40:38] 2026-01-09 08:40:38,382 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:40:38] 2026-01-09 08:40:38,389 [wrapper] pilotpid: 29495
[2026-01-09 09:40:38] 2026-01-09 08:40:38,397 [wrapper] Pilot exit status: 0
[2026-01-09 09:40:38] 2026-01-09 08:40:38,419 [wrapper] pandaids: 6963155762
[2026-01-09 09:40:38] 2026-01-09 08:40:38,458 [wrapper] cleanup supervisor_pilot 20073 29496
[2026-01-09 09:40:38] 2026-01-09 08:40:38,464 [wrapper] Test setup, not cleaning
[2026-01-09 09:40:38] 2026-01-09 08:40:38,470 [wrapper] apfmon messages muted
[2026-01-09 09:40:38] 2026-01-09 08:40:38,476 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:40:38] 2026-01-09 08:40:38,482 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:40:38]  *** Error codes and diagnostics ***
[2026-01-09 09:40:38]     "exeErrorCode": 0,
[2026-01-09 09:40:38]     "exeErrorDiag": "",
[2026-01-09 09:40:38]     "pilotErrorCode": 0,
[2026-01-09 09:40:38]     "pilotErrorDiag": "",
[2026-01-09 09:40:38]  *** Listing of results directory ***
[2026-01-09 09:40:38] total 442788
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 09:40:38] -rwx------. 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:40:38] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:55 run_atlas
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:55 job.xml
[2026-01-09 09:40:38] -rw-r--r--. 2 boinc boinc 226172258 Jan  9 06:55 EVNT.47898824._001200.pool.root.1
[2026-01-09 09:40:38] drwxrwx--x. 2 boinc boinc        68 Jan  9 06:55 shared
[2026-01-09 09:40:38] -rw-r--r--. 2 boinc boinc    592395 Jan  9 06:55 input.tar.gz
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc      6392 Jan  9 06:55 init_data.xml
[2026-01-09 09:40:38] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:55 start_atlas.sh
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:55 boinc_lockfile
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc      2520 Jan  9 06:55 pandaJob.out
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc    989771 Jan  9 06:56 agis_schedconf.cvmfs.json
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc   1516240 Jan  9 06:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:40:38] drwx------. 5 boinc boinc      4096 Jan  9 06:56 pilot3
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc 219923709 Jan  9 09:38 HITS.47898826._030984.pool.root.1
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc       530 Jan  9 09:39 boinc_task_state.xml
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc      1013 Jan  9 09:39 memory_monitor_summary.json
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc    391360 Jan  9 09:39 log.47898826._030984.job.log.tgz.1
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc      7765 Jan  9 09:39 heartbeat.json
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:40 boinc_mmap_file
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc        27 Jan  9 09:40 wrapper_checkpoint.txt
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc        95 Jan  9 09:40 pilot_heartbeat.json
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc      4810 Jan  9 09:40 pilotlog.txt
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc   1316027 Jan  9 09:40 log.47898826._030984.job.log.1
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc       357 Jan  9 09:40 output.list
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:40 runtime_log
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc   1730560 Jan  9 09:40 result.tar.gz
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc      8832 Jan  9 09:40 runtime_log.err
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc       652 Jan  9 09:40 jStLDmYZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFKlKDmYcUMVo.diag
[2026-01-09 09:40:38] -rw-r--r--. 1 boinc boinc     20751 Jan  9 09:40 stderr.txt
[2026-01-09 09:40:38] HITS file was successfully produced:
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc 219923709 Jan  9 09:38 shared/HITS.pool.root.1
[2026-01-09 09:40:38]  *** Contents of shared directory: ***
[2026-01-09 09:40:38] total 437932
[2026-01-09 09:40:38] -rw-r--r--. 2 boinc boinc 226172258 Jan  9 06:55 ATLAS.root_0
[2026-01-09 09:40:38] -rw-r--r--. 2 boinc boinc    592395 Jan  9 06:55 input.tar.gz
[2026-01-09 09:40:38] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:55 start_atlas.sh
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc 219923709 Jan  9 09:38 HITS.pool.root.1
[2026-01-09 09:40:38] -rw-------. 1 boinc boinc   1730560 Jan  9 09:40 result.tar.gz
09:40:40 (25767): run_atlas exited; CPU time 73394.512484
09:40:40 (25767): called boinc_finish(0)

</stderr_txt>
]]>

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