Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:48:53 (1976620): wrapper (7.7.26015): starting
17:48:53 (1976620): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 17:48:53] Arguments: --nthreads 12
[2026-01-08 17:48:53] Threads: 12
[2026-01-08 17:48:53] Checking for CVMFS
[2026-01-08 17:48:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 17:48:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 17:48:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 17:48:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 17:48:53] 2.11.5.0 1774115 55937 133864 154926 1 518 36913397 45568001 18445 130560 0 352362411 99.780 227798981 18110 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 17:48:53] CVMFS is ok
[2026-01-08 17:48:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 17:48:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 17:48:54] Further information can be found at the LHC@home message board.
[2026-01-08 17:48:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 17:48:54] Checking for apptainer binary...
[2026-01-08 17:48:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 17:48:54] Running /usr/bin/apptainer --version
[2026-01-08 17:48:54] apptainer version 1.4.1-1.el9
[2026-01-08 17:48:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 17:48:54] wns0089.triumf.lcg
[2026-01-08 17:48:54] apptainer works
[2026-01-08 17:48:54] Set ATHENA_PROC_NUMBER=12
[2026-01-08 17:48:54] Set ATHENA_CORE_NUMBER=12
[2026-01-08 17:48:54] Starting ATLAS job with PandaID=6963155467
[2026-01-08 17:48:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:53:17]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | WARNING  | wrong length of table data, x=[1767923390.0], y=[1511.0] (must be same and length>=4)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | could have reported an average CPU frequency of 2692 MHz (4 samples)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | ..............................
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . Timing measurements:
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . get job = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . initial setup = 2 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . payload setup = 6 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . stage-in = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . payload execution = 31 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . stage-out = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . log creation = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | ..............................
[2026-01-08 17:53:17] 2026-01-09 01:52:16,700 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 17:53:17] 2026-01-09 01:52:16,700 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963155467/pilotlog.txt
[2026-01-08 17:53:17] 2026-01-09 01:52:16,770 | INFO     | time since job start (185s) is within the limit (349056.0s)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,781 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 17:53:17] - Log from pilotlog.txt -
[2026-01-08 17:53:17] 2026-01-09 01:52:16,698 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:53:17] 2026-01-09 01:52:16,698 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:53:17] 2026-01-09 01:52:16,698 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:53:17] 2026-01-09 01:52:16,698 | WARNING  | found no stored workdir sizes
[2026-01-08 17:53:17] 2026-01-09 01:52:16,698 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | WARNING  | wrong length of table data, x=[1767923390.0], y=[1511.0] (must be same and length>=4)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | could have reported an average CPU frequency of 2692 MHz (4 samples)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | ..............................
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . Timing measurements:
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . get job = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . initial setup = 2 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . payload setup = 6 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . stage-in = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . payload execution = 31 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . stage-out = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . log creation = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | ..............................
[2026-01-08 17:53:17] 2026-01-09 01:52:16,700 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 17:53:17] 2026-01-09 01:52:16,700 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963155467/pilotlog.txt
[2026-01-08 17:53:17] 2026-01-09 01:52:16,770 | INFO     | time since job start (185s) is within the limit (349056.0s)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,781 | WARNING  | 
[2026-01-08 17:53:17] [begin log extracts]
[2026-01-08 17:53:17] - Log from pilotlog.txt -
[2026-01-08 17:53:17] 2026-01-09 01:52:16,698 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:53:17] 2026-01-09 01:52:16,698 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:53:17] 2026-01-09 01:52:16,698 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:53:17] 2026-01-09 01:52:16,698 | WARNING  | found no stored workdir sizes
[2026-01-08 17:53:17] 2026-01-09 01:52:16,698 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | WARNING  | wrong length of table data, x=[1767923390.0], y=[1511.0] (must be same and length>=4)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | could have reported an average CPU frequency of 2692 MHz (4 samples)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | ..............................
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . Timing measurements:
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . get job = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . initial setup = 2 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . payload setup = 6 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . stage-in = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . payload execution = 31 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . stage-out = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | . log creation = 0 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,699 | INFO     | ..............................
[2026-01-08 17:53:17] 2026-01-09 01:52:16,700 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 17:53:17] 2026-01-09 01:52:16,700 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963155467/pilotlog.txt
[2026-01-08 17:53:17] 2026-01-09 01:52:16,770 | INFO     | time since job start (185s) is within the limit (349056.0s)
[2026-01-08 17:53:17] [end log extracts]
[2026-01-08 17:53:17] 2026-01-09 01:52:16,782 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,782 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 17:53:17] 2026-01-09 01:52:16,885 | INFO     | 
[2026-01-08 17:53:17] 2026-01-09 01:52:16,885 | INFO     | job summary report
[2026-01-08 17:53:17] 2026-01-09 01:52:16,885 | INFO     | --------------------------------------------------
[2026-01-08 17:53:17] 2026-01-09 01:52:16,885 | INFO     | PanDA job id: 6963155467
[2026-01-08 17:53:17] 2026-01-09 01:52:16,885 | INFO     | task id: 47898826
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 17:50:05,149 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | pilot state: failed 
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | transexitcode: 65
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | exeerrorcode: 65
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | exitcode: 65
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | cpuconsumptiontime: 18 s
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | nevents: 0
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | neventsw: 0
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | pid: 1991079
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | pgrp: 1991079
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | corecount: 12
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | event service: False
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | sizes: {0: 2283968, 9: 2284230, 11: 2284258, 42: 2311799, 166: 2311937}
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | --------------------------------------------------
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | 
[2026-01-08 17:53:17] 2026-01-09 01:52:16,886 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 17:53:17] 2026-01-09 01:52:17,014 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,016 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:53:17] 2026-01-09 01:52:17,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,016 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:53:17] 2026-01-09 01:52:17,016 | INFO     | job 6963155467 has completed (purged errors)
[2026-01-08 17:53:17] 2026-01-09 01:52:17,016 | INFO     | overall cleanup function is called
[2026-01-08 17:53:17] 2026-01-09 01:52:18,027 | INFO     | --- collectZombieJob: --- 10, [1991079]
[2026-01-08 17:53:17] 2026-01-09 01:52:18,027 | INFO     | zombie collector waiting for pid 1991079
[2026-01-08 17:53:17] 2026-01-09 01:52:18,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:53:17] 2026-01-09 01:52:18,028 | INFO     | collected zombie processes
[2026-01-08 17:53:17] 2026-01-09 01:52:18,028 | INFO     | will attempt to kill all subprocesses of pid=1991079
[2026-01-08 17:53:17] 2026-01-09 01:52:18,615 | INFO     | process IDs to be killed: [1991079] (in reverse order)
[2026-01-08 17:53:17] 2026-01-09 01:52:18,819 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:53:17] 2026-01-09 01:52:18,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:53:17] 2026-01-09 01:52:18,856 | INFO     | did not find any defunct processes belonging to 1991079
[2026-01-08 17:53:17] 2026-01-09 01:52:18,867 | INFO     | did not find any defunct processes belonging to 1991079
[2026-01-08 17:53:17] 2026-01-09 01:52:18,868 | INFO     | ready for new job
[2026-01-08 17:53:17] 2026-01-09 01:52:18,868 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:53:17] 2026-01-09 01:52:18,870 | INFO     | ***************************************
[2026-01-08 17:53:17] 2026-01-09 01:52:18,870 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:53:17] 2026-01-09 01:52:18,870 | INFO     | ***************************************
[2026-01-08 17:53:17] 2026-01-09 01:52:18,870 | INFO     | 
[2026-01-08 17:53:17] 2026-01-09 01:52:18,872 | INFO     | architecture information:
[2026-01-08 17:53:17] 2026-01-09 01:52:18,877 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:53:17] 2026-01-09 01:52:18,947 | INFO     | cat /etc/os-release:
[2026-01-08 17:53:17] NAME="CentOS Linux"
[2026-01-08 17:53:17] VERSION="7 (Core)"
[2026-01-08 17:53:17] ID="centos"
[2026-01-08 17:53:17] ID_LIKE="rhel fedora"
[2026-01-08 17:53:17] VERSION_ID="7"
[2026-01-08 17:53:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:53:17] ANSI_COLOR="0;31"
[2026-01-08 17:53:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:53:17] HOME_URL="https://www.centos.org/"
[2026-01-08 17:53:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:53:17] 
[2026-01-08 17:53:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:53:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:53:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:53:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:53:17] 
[2026-01-08 17:53:17] 2026-01-09 01:52:18,947 | INFO     | ***************************************
[2026-01-08 17:53:17] 2026-01-09 01:52:19,451 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 17:53:17] 2026-01-09 01:52:19,551 | INFO     | sufficient remaining disk space (1463016226816 B)
[2026-01-08 17:53:17] 2026-01-09 01:52:19,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:53:17] 2026-01-09 01:52:19,552 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:53:17] 2026-01-09 01:52:19,552 | INFO     | update_server=False
[2026-01-08 17:53:17] 2026-01-09 01:52:19,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:53:17] 2026-01-09 01:52:19,552 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:53:17] 2026-01-09 01:52:19,807 | INFO     | all payload control threads have been joined
[2026-01-08 17:53:17] 2026-01-09 01:52:20,025 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 17:53:17] 2026-01-09 01:52:20,025 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 17:53:17] 2026-01-09 01:52:20,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:53:17] 2026-01-09 01:52:20,025 | INFO     | will abort loop
[2026-01-08 17:53:17] 2026-01-09 01:52:20,408 | INFO     | all data control threads have been joined
[2026-01-08 17:53:17] 2026-01-09 01:52:20,557 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:20,651 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:20,813 | INFO     | [payload] control thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:20,882 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:20,895 | INFO     | all job control threads have been joined
[2026-01-08 17:53:17] 2026-01-09 01:52:20,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:53:17] 2026-01-09 01:52:20,962 | INFO     | [job] validate thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:21,030 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:21,124 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:21,305 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:21,359 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:21,414 | INFO     | [data] control thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:21,559 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:21,653 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:21,731 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:21,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:53:17] 2026-01-09 01:52:21,904 | INFO     | [job] control thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:22,884 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:24,921 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:53:17] 2026-01-09 01:52:50,186 | INFO     | PID=1984207 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 17:53:17] 2026-01-09 01:52:50,186 | INFO     | .. there are 46 such processes running
[2026-01-08 17:53:17] 2026-01-09 01:52:50,186 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:53:17] 2026-01-09 01:52:50,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:53:17] 2026-01-09 01:52:50,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:53:17] 2026-01-09 01:53:11,427 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:53:17] 2026-01-09 01:53:12,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223783667520)>', '<ExcThread(monitor, started 140223166019328)>']
[2026-01-08 17:53:17] 2026-01-09 01:53:13,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:53:17] 2026-01-09 01:53:13,315 | INFO     | [monitor] control thread has ended
[2026-01-08 17:53:17] 2026-01-09 01:53:17,425 | INFO     | all workflow threads have been joined
[2026-01-08 17:53:17] 2026-01-09 01:53:17,425 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:53:17] 2026-01-09 01:53:17,426 | INFO     | traces error code: 0
[2026-01-08 17:53:17] 2026-01-09 01:53:17,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:53:17] 2026-01-09 01:53:17,578 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:53:17] 2026-01-09 01:53:17,580 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:53:17] 2026-01-09 01:53:17,582 [wrapper] pilotpid: 1984207
[2026-01-08 17:53:17] 2026-01-09 01:53:17,584 [wrapper] Pilot exit status: 0
[2026-01-08 17:53:17] 2026-01-09 01:53:17,590 [wrapper] pandaids: 6963155467
[2026-01-08 17:53:17] 2026-01-09 01:53:17,647 [wrapper] cleanup supervisor_pilot 1984213 1984208
[2026-01-08 17:53:17] 2026-01-09 01:53:17,649 [wrapper] Test setup, not cleaning
[2026-01-08 17:53:17] 2026-01-09 01:53:17,651 [wrapper] apfmon messages muted
[2026-01-08 17:53:17] 2026-01-09 01:53:17,652 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:53:17] 2026-01-09 01:53:17,654 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:53:17]  *** Error codes and diagnostics ***
[2026-01-08 17:53:17]     "exeErrorCode": 65,
[2026-01-08 17:53:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 17:53:17]     "pilotErrorCode": 1305,
[2026-01-08 17:53:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 17:53:17]  *** Listing of results directory ***
[2026-01-08 17:53:17] total 227008
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc    579449 Jan  8 11:06 pilot3.tar.gz
[2026-01-08 17:53:17] -rwx------. 1 boinc boinc     36322 Jan  8 11:09 runpilot2-wrapper.sh
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc      5112 Jan  8 11:11 queuedata.json
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc       100 Jan  8 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:53:17] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 17:48 run_atlas
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc       105 Jan  8 17:48 job.xml
[2026-01-08 17:53:17] -rw-r--r--. 2 boinc boinc 228331574 Jan  8 17:48 EVNT.47898824._001189.pool.root.1
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc      6595 Jan  8 17:48 init_data.xml
[2026-01-08 17:53:17] drwxrwx--x. 2 boinc boinc      4096 Jan  8 17:48 shared
[2026-01-08 17:53:17] -rw-r--r--. 2 boinc boinc    592396 Jan  8 17:48 input.tar.gz
[2026-01-08 17:53:17] -rw-r--r--. 2 boinc boinc     15847 Jan  8 17:48 start_atlas.sh
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc         0 Jan  8 17:48 boinc_lockfile
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc      2520 Jan  8 17:48 pandaJob.out
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc    989821 Jan  8 17:49 agis_schedconf.cvmfs.json
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc   1516240 Jan  8 17:49 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:53:17] drwx------. 5 boinc boinc      4096 Jan  8 17:49 pilot3
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc       522 Jan  8 17:50 boinc_task_state.xml
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc       989 Jan  8 17:50 memory_monitor_summary.json
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc     21170 Jan  8 17:50 log.47898826._030717.job.log.tgz.1
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc        95 Jan  8 17:52 pilot_heartbeat.json
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc      8404 Jan  8 17:52 heartbeat.json
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc      8192 Jan  8 17:53 boinc_mmap_file
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc        22 Jan  8 17:53 wrapper_checkpoint.txt
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc      5009 Jan  8 17:53 pilotlog.txt
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc     84352 Jan  8 17:53 log.47898826._030717.job.log.1
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc       188 Jan  8 17:53 output.list
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc       620 Jan  8 17:53 runtime_log
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc    122880 Jan  8 17:53 result.tar.gz
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc      8636 Jan  8 17:53 runtime_log.err
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc       645 Jan  8 17:53 nMXKDmPZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmS5fKDmNwfcBn.diag
[2026-01-08 17:53:17] -rw-r--r--. 1 boinc boinc     21689 Jan  8 17:53 stderr.txt
[2026-01-08 17:53:17] No HITS result produced
[2026-01-08 17:53:17]  *** Contents of shared directory: ***
[2026-01-08 17:53:17] total 223704
[2026-01-08 17:53:17] -rw-r--r--. 2 boinc boinc 228331574 Jan  8 17:48 ATLAS.root_0
[2026-01-08 17:53:17] -rw-r--r--. 2 boinc boinc    592396 Jan  8 17:48 input.tar.gz
[2026-01-08 17:53:17] -rw-r--r--. 2 boinc boinc     15847 Jan  8 17:48 start_atlas.sh
[2026-01-08 17:53:17] -rw-------. 1 boinc boinc    122880 Jan  8 17:53 result.tar.gz
17:53:19 (1976620): run_atlas exited; CPU time 25.017314
17:53:19 (1976620): called boinc_finish(0)

</stderr_txt>
]]>

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