Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:40:18 (2431909): wrapper (7.7.26015): starting
21:40:18 (2431909): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 21:40:18] Arguments: --nthreads 8
[2026-01-08 21:40:18] Threads: 8
[2026-01-08 21:40:18] Checking for CVMFS
[2026-01-08 21:40:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:40:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:40:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:40:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:40:18] 2.13.3.0 12537 92820 392328 154927 0 334 32357751 40960000 12806 16776704 43 375686369 99.601 394336819 37506 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 21:40:18] CVMFS is ok
[2026-01-08 21:40:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 21:40:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 21:40:18] Further information can be found at the LHC@home message board.
[2026-01-08 21:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:40:18] Checking for apptainer binary...
[2026-01-08 21:40:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:40:18] Running /usr/bin/apptainer --version
[2026-01-08 21:40:18] apptainer version 1.4.5-2.el9
[2026-01-08 21:40:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:40:19] c7-11-14.aglt2.org
[2026-01-08 21:40:19] apptainer works
[2026-01-08 21:40:19] Set ATHENA_PROC_NUMBER=8
[2026-01-08 21:40:19] Set ATHENA_CORE_NUMBER=8
[2026-01-08 21:40:19] Starting ATLAS job with PandaID=6963146672
[2026-01-08 21:40:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:21:35]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:21:35] 2026-01-09 10:20:59,827 | INFO     | time since job start (27624s) is within the limit (349056.0s)
[2026-01-09 05:21:35] 2026-01-09 10:21:00,948 | INFO     | monitor loop #1657: job 0:6963146672 is in state 'finished'
[2026-01-09 05:21:35] 2026-01-09 10:21:00,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:21:35] 2026-01-09 10:21:01,836 | INFO     | time since job start (27626s) is within the limit (349056.0s)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,455 | INFO     | monitor loop #1658: job 0:6963146672 is in state 'finished'
[2026-01-09 05:21:35] 2026-01-09 10:21:03,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,588 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 05:21:35] 2026-01-09 10:21:03,592 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.869187500001
[2026-01-09 05:21:35] 2026-01-09 10:21:03,601 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963146672/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,602 | INFO     | extracted standard info from prmon json
[2026-01-09 05:21:35] 2026-01-09 10:21:03,602 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:21:35] 2026-01-09 10:21:03,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:21:35] 2026-01-09 10:21:03,602 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:21:35] 2026-01-09 10:21:03,602 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:21:35] 2026-01-09 10:21:03,608 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:21:35] 2026-01-09 10:21:03,608 | INFO     | sum of square deviations: 28632166222.18372
[2026-01-09 05:21:35] 2026-01-09 10:21:03,612 | INFO     | sum of deviations: -1154221355.9624221
[2026-01-09 05:21:35] 2026-01-09 10:21:03,612 | INFO     | mean x: 1767940245.2146018
[2026-01-09 05:21:35] 2026-01-09 10:21:03,612 | INFO     | mean y: 2522298.2367256638
[2026-01-09 05:21:35] 2026-01-09 10:21:03,612 | INFO     | intersect: 73791596.2443321
[2026-01-09 05:21:35] 2026-01-09 10:21:03,613 | INFO     | chi2: 1.7965328320298586
[2026-01-09 05:21:35] 2026-01-09 10:21:03,613 | INFO     | sum of square deviations: 27692415348.48333
[2026-01-09 05:21:35] 2026-01-09 10:21:03,617 | INFO     | sum of deviations: -1891768024.1946301
[2026-01-09 05:21:35] 2026-01-09 10:21:03,617 | INFO     | mean x: 1767940092.7181208
[2026-01-09 05:21:35] 2026-01-09 10:21:03,617 | INFO     | mean y: 2522178.5302013424
[2026-01-09 05:21:35] 2026-01-09 10:21:03,617 | INFO     | intersect: 123296495.03556915
[2026-01-09 05:21:35] 2026-01-09 10:21:03,618 | INFO     | chi2: 1.7960764736461152
[2026-01-09 05:21:35] 2026-01-09 10:21:03,618 | INFO     | current chi2=1.7960764736461152 (change=0.02540217332002401 %)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,618 | INFO     | right removable region: 446
[2026-01-09 05:21:35] 2026-01-09 10:21:03,618 | INFO     | sum of square deviations: 27692273339.601852
[2026-01-09 05:21:35] 2026-01-09 10:21:03,622 | INFO     | sum of deviations: -63069687486.43397
[2026-01-09 05:21:35] 2026-01-09 10:21:03,622 | INFO     | mean x: 1767940397.722595
[2026-01-09 05:21:35] 2026-01-09 10:21:03,622 | INFO     | mean y: 2532281.270693512
[2026-01-09 05:21:35] 2026-01-09 10:21:03,622 | INFO     | intersect: 4029050689.910993
[2026-01-09 05:21:35] 2026-01-09 10:21:03,623 | INFO     | chi2: 0.39751929239847483
[2026-01-09 05:21:35] 2026-01-09 10:21:03,623 | INFO     | current chi2=0.39751929239847483 (change=77.87297369069913 %)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,623 | INFO     | sum of square deviations: 26773280490.271606
[2026-01-09 05:21:35] 2026-01-09 10:21:03,627 | INFO     | sum of deviations: -40302477028.40718
[2026-01-09 05:21:35] 2026-01-09 10:21:03,627 | INFO     | mean x: 1767940550.2217195
[2026-01-09 05:21:35] 2026-01-09 10:21:03,627 | INFO     | mean y: 2528501.6674208143
[2026-01-09 05:21:35] 2026-01-09 10:21:03,627 | INFO     | intersect: 2663852855.953808
[2026-01-09 05:21:35] 2026-01-09 10:21:03,627 | INFO     | chi2: 0.32687165731944695
[2026-01-09 05:21:35] 2026-01-09 10:21:03,627 | INFO     | current chi2=0.32687165731944695 (change=17.772127398589358 %)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,627 | INFO     | left removable region: 20
[2026-01-09 05:21:35] 2026-01-09 10:21:03,628 | INFO     | sum of square deviations: 23969531444.913208
[2026-01-09 05:21:35] 2026-01-09 10:21:03,631 | INFO     | sum of deviations: 9523345610.359163
[2026-01-09 05:21:35] 2026-01-09 10:21:03,631 | INFO     | mean x: 1767940672.2276995
[2026-01-09 05:21:35] 2026-01-09 10:21:03,631 | INFO     | mean y: 2519578.2746478873
[2026-01-09 05:21:35] 2026-01-09 10:21:03,631 | INFO     | intersect: -699901746.853431
[2026-01-09 05:21:35] 2026-01-09 10:21:03,632 | INFO     | chi2: 0.11357642750724295
[2026-01-09 05:21:35] 2026-01-09 10:21:03,632 | INFO     | current memory leak: 0.40 B/s (using 426 data points, chi2=0.11)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,632 | INFO     | could have reported an average CPU frequency of 3290 MHz (19 samples)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,633 | INFO     | ..............................
[2026-01-09 05:21:35] 2026-01-09 10:21:03,633 | INFO     | . Timing measurements:
[2026-01-09 05:21:35] 2026-01-09 10:21:03,633 | INFO     | . get job = 0 s
[2026-01-09 05:21:35] 2026-01-09 10:21:03,633 | INFO     | . initial setup = 2 s
[2026-01-09 05:21:35] 2026-01-09 10:21:03,633 | INFO     | . payload setup = 15 s
[2026-01-09 05:21:35] 2026-01-09 10:21:03,633 | INFO     | . stage-in = 0 s
[2026-01-09 05:21:35] 2026-01-09 10:21:03,633 | INFO     | . payload execution = 27576 s
[2026-01-09 05:21:35] 2026-01-09 10:21:03,633 | INFO     | . stage-out = 2 s
[2026-01-09 05:21:35] 2026-01-09 10:21:03,633 | INFO     | . log creation = 0 s
[2026-01-09 05:21:35] 2026-01-09 10:21:03,633 | INFO     | ..............................
[2026-01-09 05:21:35] 2026-01-09 10:21:03,709 | INFO     | 
[2026-01-09 05:21:35] 2026-01-09 10:21:03,710 | INFO     | job summary report
[2026-01-09 05:21:35] 2026-01-09 10:21:03,710 | INFO     | --------------------------------------------------
[2026-01-09 05:21:35] 2026-01-09 10:21:03,710 | INFO     | PanDA job id: 6963146672
[2026-01-09 05:21:35] 2026-01-09 10:21:03,710 | INFO     | task id: 47898826
[2026-01-09 05:21:35] 2026-01-09 10:21:03,710 | INFO     | errors: (none)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,710 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:21:35] 2026-01-09 10:21:03,710 | INFO     | pilot state: finished 
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | transexitcode: 0
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | exeerrorcode: 0
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | exeerrordiag: 
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | exitcode: 0
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | exitmsg: OK
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | cpuconsumptiontime: 47666 s
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | nevents: 400
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | neventsw: 0
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | pid: 2442597
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | pgrp: 2442597
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | corecount: 8
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | event service: False
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | sizes: {0: 2283741, 1: 2283996, 9: 2284258, 12: 2284286, 27596: 2321071, 27599: 2330253, 27606: 2330391}
[2026-01-09 05:21:35] 2026-01-09 10:21:03,711 | INFO     | --------------------------------------------------
[2026-01-09 05:21:35] 2026-01-09 10:21:03,712 | INFO     | 
[2026-01-09 05:21:35] 2026-01-09 10:21:03,712 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 05:21:35] 2026-01-09 10:21:03,736 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,736 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,736 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,736 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,736 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,739 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,739 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:21:35] 2026-01-09 10:21:03,739 | INFO     | job 6963146672 has completed (purged errors)
[2026-01-09 05:21:35] 2026-01-09 10:21:03,739 | INFO     | overall cleanup function is called
[2026-01-09 05:21:35] 2026-01-09 10:21:04,748 | INFO     | --- collectZombieJob: --- 10, [2442597]
[2026-01-09 05:21:35] 2026-01-09 10:21:04,752 | INFO     | zombie collector waiting for pid 2442597
[2026-01-09 05:21:35] 2026-01-09 10:21:04,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:21:35] 2026-01-09 10:21:04,752 | INFO     | collected zombie processes
[2026-01-09 05:21:35] 2026-01-09 10:21:04,752 | INFO     | will attempt to kill all subprocesses of pid=2442597
[2026-01-09 05:21:35] 2026-01-09 10:21:05,271 | INFO     | process IDs to be killed: [2442597] (in reverse order)
[2026-01-09 05:21:35] 2026-01-09 10:21:05,371 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:21:35] 2026-01-09 10:21:05,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:21:35] 2026-01-09 10:21:05,384 | INFO     | did not find any defunct processes belonging to 2442597
[2026-01-09 05:21:35] 2026-01-09 10:21:05,400 | INFO     | did not find any defunct processes belonging to 2442597
[2026-01-09 05:21:35] 2026-01-09 10:21:05,400 | INFO     | ready for new job
[2026-01-09 05:21:35] 2026-01-09 10:21:05,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:21:35] 2026-01-09 10:21:05,403 | INFO     | ***************************************
[2026-01-09 05:21:35] 2026-01-09 10:21:05,403 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:21:35] 2026-01-09 10:21:05,403 | INFO     | ***************************************
[2026-01-09 05:21:35] 2026-01-09 10:21:05,403 | INFO     | 
[2026-01-09 05:21:35] 2026-01-09 10:21:05,407 | INFO     | architecture information:
[2026-01-09 05:21:35] 2026-01-09 10:21:05,407 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:21:35] 2026-01-09 10:21:05,425 | INFO     | cat /etc/os-release:
[2026-01-09 05:21:35] NAME="CentOS Linux"
[2026-01-09 05:21:35] VERSION="7 (Core)"
[2026-01-09 05:21:35] ID="centos"
[2026-01-09 05:21:35] ID_LIKE="rhel fedora"
[2026-01-09 05:21:35] VERSION_ID="7"
[2026-01-09 05:21:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:21:35] ANSI_COLOR="0;31"
[2026-01-09 05:21:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:21:35] HOME_URL="https://www.centos.org/"
[2026-01-09 05:21:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:21:35] 
[2026-01-09 05:21:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:21:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:21:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:21:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:21:35] 
[2026-01-09 05:21:35] 2026-01-09 10:21:05,426 | INFO     | ***************************************
[2026-01-09 05:21:35] 2026-01-09 10:21:05,930 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 05:21:35] 2026-01-09 10:21:05,950 | INFO     | sufficient remaining disk space (84333821952 B)
[2026-01-09 05:21:35] 2026-01-09 10:21:05,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:21:35] 2026-01-09 10:21:05,951 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:21:35] 2026-01-09 10:21:05,951 | INFO     | update_server=False
[2026-01-09 05:21:35] 2026-01-09 10:21:05,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:21:35] 2026-01-09 10:21:05,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:21:35] 2026-01-09 10:21:05,959 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 05:21:35] 2026-01-09 10:21:05,959 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 05:21:35] 2026-01-09 10:21:05,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:21:35] 2026-01-09 10:21:05,959 | INFO     | will abort loop
[2026-01-09 05:21:35] 2026-01-09 10:21:06,368 | INFO     | all data control threads have been joined
[2026-01-09 05:21:35] 2026-01-09 10:21:06,389 | INFO     | all job control threads have been joined
[2026-01-09 05:21:35] 2026-01-09 10:21:06,509 | INFO     | all payload control threads have been joined
[2026-01-09 05:21:35] 2026-01-09 10:21:06,957 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:06,964 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:07,085 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:07,364 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:07,373 | INFO     | [data] control thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:07,395 | INFO     | [job] control thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:07,515 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:07,515 | INFO     | [payload] control thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:07,572 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:07,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:21:35] 2026-01-09 10:21:07,957 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:07,993 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:08,163 | INFO     | [job] validate thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:08,218 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:08,324 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:08,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:21:35] 2026-01-09 10:21:09,727 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:11,965 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:21:35] 2026-01-09 10:21:23,700 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:21:35] 2026-01-09 10:21:25,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055490520896)>', '<ExcThread(monitor, started 140054722770688)>']
[2026-01-09 05:21:35] 2026-01-09 10:21:30,460 | INFO     | all workflow threads have been joined
[2026-01-09 05:21:35] 2026-01-09 10:21:30,460 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:21:35] 2026-01-09 10:21:30,461 | INFO     | traces error code: 0
[2026-01-09 05:21:35] 2026-01-09 10:21:30,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:21:35] 2026-01-09 10:21:35,376 | INFO     | PID=2435586 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 05:21:35] 2026-01-09 10:21:35,377 | INFO     | .. there are 12 such processes running
[2026-01-09 05:21:35] 2026-01-09 10:21:35,377 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:21:35] 2026-01-09 10:21:35,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:21:35] 2026-01-09 10:21:35,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:21:35] 2026-01-09 10:21:35,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:21:35] 2026-01-09 10:21:35,378 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 05:21:35] 2026-01-09 10:21:35,378 | INFO     | [monitor] control thread has ended
[2026-01-09 05:21:35] 2026-01-09 10:21:35,481 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:21:35] 2026-01-09 10:21:35,484 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:21:35] 2026-01-09 10:21:35,486 [wrapper] pilotpid: 2435586
[2026-01-09 05:21:35] 2026-01-09 10:21:35,489 [wrapper] Pilot exit status: 0
[2026-01-09 05:21:35] 2026-01-09 10:21:35,503 [wrapper] pandaids: 6963146672
[2026-01-09 05:21:35] 2026-01-09 10:21:35,580 [wrapper] cleanup supervisor_pilot 3549733 2435587
[2026-01-09 05:21:35] 2026-01-09 10:21:35,583 [wrapper] Test setup, not cleaning
[2026-01-09 05:21:35] 2026-01-09 10:21:35,586 [wrapper] apfmon messages muted
[2026-01-09 05:21:35] 2026-01-09 10:21:35,589 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:21:35] 2026-01-09 10:21:35,592 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:21:35]  *** Error codes and diagnostics ***
[2026-01-09 05:21:35]     "exeErrorCode": 0,
[2026-01-09 05:21:35]     "exeErrorDiag": "",
[2026-01-09 05:21:35]     "pilotErrorCode": 0,
[2026-01-09 05:21:35]     "pilotErrorDiag": "",
[2026-01-09 05:21:35]  *** Listing of results directory ***
[2026-01-09 05:21:35] total 443796
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 05:21:35] -rwx------. 1 boincer umatlas     36322 Jan  8 10:03 runpilot2-wrapper.sh
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:04 queuedata.json
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas       100 Jan  8 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:21:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 21:40 run_atlas
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas       105 Jan  8 21:40 job.xml
[2026-01-09 05:21:35] -rw-r--r--. 2 boincer umatlas 225764971 Jan  8 21:40 EVNT.47898824._001065.pool.root.1
[2026-01-09 05:21:35] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 21:40 start_atlas.sh
[2026-01-09 05:21:35] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 21:40 shared
[2026-01-09 05:21:35] -rw-r--r--. 2 boincer umatlas    592398 Jan  8 21:40 input.tar.gz
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas         0 Jan  8 21:40 boinc_lockfile
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 21:40 pandaJob.out
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas        57 Jan  8 21:40 setup.sh.local
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas    989763 Jan  8 21:40 agis_schedconf.cvmfs.json
[2026-01-09 05:21:35] drwx------. 5 boincer umatlas      4096 Jan  8 21:40 pilot3
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas      6903 Jan  9 05:11 init_data.xml
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas 216672447 Jan  9 05:20 HITS.47898826._026999.pool.root.1
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas       530 Jan  9 05:20 boinc_task_state.xml
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas      1030 Jan  9 05:20 memory_monitor_summary.json
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas   1516240 Jan  9 05:20 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas    608499 Jan  9 05:20 log.47898826._026999.job.log.tgz.1
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas      7770 Jan  9 05:21 heartbeat.json
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 05:21 boinc_mmap_file
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas        28 Jan  9 05:21 wrapper_checkpoint.txt
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas        95 Jan  9 05:21 pilot_heartbeat.json
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas       893 Jan  9 05:21 pilotlog.txt
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas   3438518 Jan  9 05:21 log.47898826._026999.job.log.1
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas       357 Jan  9 05:21 output.list
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas       620 Jan  9 05:21 runtime_log
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas   4065280 Jan  9 05:21 result.tar.gz
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas       657 Jan  9 05:21 XHTLDmGj6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEhkKDmkLCaan.diag
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 05:21 runtime_log.err
[2026-01-09 05:21:35] -rw-r--r--. 1 boincer umatlas     21352 Jan  9 05:21 stderr.txt
[2026-01-09 05:21:35] HITS file was successfully produced:
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas 216672447 Jan  9 05:20 shared/HITS.pool.root.1
[2026-01-09 05:21:35]  *** Contents of shared directory: ***
[2026-01-09 05:21:35] total 436648
[2026-01-09 05:21:35] -rw-r--r--. 2 boincer umatlas 225764971 Jan  8 21:40 ATLAS.root_0
[2026-01-09 05:21:35] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 21:40 start_atlas.sh
[2026-01-09 05:21:35] -rw-r--r--. 2 boincer umatlas    592398 Jan  8 21:40 input.tar.gz
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas 216672447 Jan  9 05:20 HITS.pool.root.1
[2026-01-09 05:21:35] -rw-------. 1 boincer umatlas   4065280 Jan  9 05:21 result.tar.gz
05:21:37 (2431909): run_atlas exited; CPU time 48178.892078
05:21:37 (2431909): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN