Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:53:07 (1002023): wrapper (7.7.26015): starting
06:53:07 (1002023): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 06:53:07] Arguments: --nthreads 12
[2026-01-09 06:53:07] Threads: 12
[2026-01-09 06:53:07] Checking for CVMFS
[2026-01-09 06:53:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:53:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:53:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:53:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:53:08] 2.12.7.0 3936030 2247 75088 154933 3 61 2590889 4097024 923 130560 0 3041301 99.967 251830 21860 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-09 06:53:08] CVMFS is ok
[2026-01-09 06:53:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:53:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:53:08] Further information can be found at the LHC@home message board.
[2026-01-09 06:53:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:53:08] Checking for apptainer binary...
[2026-01-09 06:53:08] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 06:53:08] apptainer is not installed, using version from CVMFS
[2026-01-09 06:53:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:53:08] pckelar4.cern.ch
[2026-01-09 06:53:08] apptainer works
[2026-01-09 06:53:08] Set ATHENA_PROC_NUMBER=12
[2026-01-09 06:53:08] Set ATHENA_CORE_NUMBER=12
[2026-01-09 06:53:08] Starting ATLAS job with PandaID=6963153558
[2026-01-09 06:53:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:27:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:27:46] 2026-01-09 08:27:09,525 | INFO     | total number of processed events: 400 (read)
[2026-01-09 09:27:46] 2026-01-09 08:27:09,526 | INFO     | executing command: lscpu
[2026-01-09 09:27:46] 2026-01-09 08:27:09,562 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 09:27:46] 2026-01-09 08:27:10,465 | INFO     | monitor loop #686: job 0:6963153558 is in state 'finished'
[2026-01-09 09:27:46] 2026-01-09 08:27:10,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:27:46] 2026-01-09 08:27:11,116 | INFO     | time since job start (9233s) is within the limit (349056.0s)
[2026-01-09 09:27:46] 2026-01-09 08:27:12,968 | INFO     | monitor loop #687: job 0:6963153558 is in state 'finished'
[2026-01-09 09:27:46] 2026-01-09 08:27:12,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:27:46] 2026-01-09 08:27:13,121 | INFO     | time since job start (9235s) is within the limit (349056.0s)
[2026-01-09 09:27:46] 2026-01-09 08:27:14,260 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 09:27:46] 2026-01-09 08:27:14,265 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2833.4344166666665
[2026-01-09 09:27:46] 2026-01-09 08:27:14,270 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6963153558/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:27:46] 2026-01-09 08:27:14,271 | INFO     | extracted standard info from prmon json
[2026-01-09 09:27:46] 2026-01-09 08:27:14,271 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:27:46] 2026-01-09 08:27:14,272 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:27:46] 2026-01-09 08:27:14,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:27:46] 2026-01-09 08:27:14,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:27:46] 2026-01-09 08:27:14,277 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:27:46] 2026-01-09 08:27:14,277 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 09:27:46] 2026-01-09 08:27:14,279 | INFO     | sum of deviations: 2382470960.9999976
[2026-01-09 09:27:46] 2026-01-09 08:27:14,279 | INFO     | mean x: 1767942603.0
[2026-01-09 09:27:46] 2026-01-09 08:27:14,279 | INFO     | mean y: 2725050.2450331124
[2026-01-09 09:27:46] 2026-01-09 08:27:14,279 | INFO     | intersect: -3942806849.20318
[2026-01-09 09:27:46] 2026-01-09 08:27:14,280 | INFO     | chi2: 1.4125731925176295
[2026-01-09 09:27:46] 2026-01-09 08:27:14,280 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 09:27:46] 2026-01-09 08:27:14,281 | INFO     | sum of deviations: 2322183532.500002
[2026-01-09 09:27:46] 2026-01-09 08:27:14,281 | INFO     | mean x: 1767942450.5
[2026-01-09 09:27:46] 2026-01-09 08:27:14,282 | INFO     | mean y: 2724960.609589041
[2026-01-09 09:27:46] 2026-01-09 08:27:14,282 | INFO     | intersect: -4251770338.5363407
[2026-01-09 09:27:46] 2026-01-09 08:27:14,282 | INFO     | chi2: 1.4130443616526625
[2026-01-09 09:27:46] 2026-01-09 08:27:14,282 | INFO     | current chi2=1.4130443616526625 (change=-0.03335537850560603 %)
[2026-01-09 09:27:46] 2026-01-09 08:27:14,282 | INFO     | right removable region: 145
[2026-01-09 09:27:46] 2026-01-09 08:27:14,283 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 09:27:46] 2026-01-09 08:27:14,284 | INFO     | sum of deviations: -19437318800.500004
[2026-01-09 09:27:46] 2026-01-09 08:27:14,284 | INFO     | mean x: 1767942755.5
[2026-01-09 09:27:46] 2026-01-09 08:27:14,284 | INFO     | mean y: 2756973.47260274
[2026-01-09 09:27:46] 2026-01-09 08:27:14,285 | INFO     | intersect: 35614066145.98938
[2026-01-09 09:27:46] 2026-01-09 08:27:14,285 | INFO     | chi2: 0.1405849244314002
[2026-01-09 09:27:46] 2026-01-09 08:27:14,285 | INFO     | current chi2=0.1405849244314002 (change=90.04760070656334 %)
[2026-01-09 09:27:46] 2026-01-09 08:27:14,285 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 09:27:46] 2026-01-09 08:27:14,286 | INFO     | sum of deviations: -14423682714.999996
[2026-01-09 09:27:46] 2026-01-09 08:27:14,287 | INFO     | mean x: 1767942908.0
[2026-01-09 09:27:46] 2026-01-09 08:27:14,287 | INFO     | mean y: 2748969.6028368794
[2026-01-09 09:27:46] 2026-01-09 08:27:14,287 | INFO     | intersect: 29340747332.91097
[2026-01-09 09:27:46] 2026-01-09 08:27:14,287 | INFO     | chi2: 0.12720585347610863
[2026-01-09 09:27:46] 2026-01-09 08:27:14,288 | INFO     | current chi2=0.12720585347610863 (change=9.516718104308554 %)
[2026-01-09 09:27:46] 2026-01-09 08:27:14,288 | INFO     | left removable region: 20
[2026-01-09 09:27:46] 2026-01-09 08:27:14,288 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 09:27:46] 2026-01-09 08:27:14,289 | INFO     | sum of deviations: -2022257847.9999998
[2026-01-09 09:27:46] 2026-01-09 08:27:14,289 | INFO     | mean x: 1767943030.0
[2026-01-09 09:27:46] 2026-01-09 08:27:14,289 | INFO     | mean y: 2726860.312
[2026-01-09 09:27:46] 2026-01-09 08:27:14,290 | INFO     | intersect: 5906424794.665407
[2026-01-09 09:27:46] 2026-01-09 08:27:14,290 | INFO     | chi2: 0.04404553188853917
[2026-01-09 09:27:46] 2026-01-09 08:27:14,290 | INFO     | current memory leak: -3.34 B/s (using 125 data points, chi2=0.04)
[2026-01-09 09:27:46] 2026-01-09 08:27:14,291 | INFO     | could have reported an average CPU frequency of 2814 MHz (9 samples)
[2026-01-09 09:27:46] 2026-01-09 08:27:14,291 | INFO     | ..............................
[2026-01-09 09:27:46] 2026-01-09 08:27:14,291 | INFO     | . Timing measurements:
[2026-01-09 09:27:46] 2026-01-09 08:27:14,291 | INFO     | . get job = 0 s
[2026-01-09 09:27:46] 2026-01-09 08:27:14,291 | INFO     | . initial setup = 1 s
[2026-01-09 09:27:46] 2026-01-09 08:27:14,291 | INFO     | . payload setup = 8 s
[2026-01-09 09:27:46] 2026-01-09 08:27:14,292 | INFO     | . stage-in = 0 s
[2026-01-09 09:27:46] 2026-01-09 08:27:14,292 | INFO     | . payload execution = 9193 s
[2026-01-09 09:27:46] 2026-01-09 08:27:14,292 | INFO     | . stage-out = 1 s
[2026-01-09 09:27:46] 2026-01-09 08:27:14,292 | INFO     | . log creation = 0 s
[2026-01-09 09:27:46] 2026-01-09 08:27:14,292 | INFO     | ..............................
[2026-01-09 09:27:46] 2026-01-09 08:27:14,447 | INFO     | 
[2026-01-09 09:27:46] 2026-01-09 08:27:14,447 | INFO     | job summary report
[2026-01-09 09:27:46] 2026-01-09 08:27:14,447 | INFO     | --------------------------------------------------
[2026-01-09 09:27:46] 2026-01-09 08:27:14,447 | INFO     | PanDA job id: 6963153558
[2026-01-09 09:27:46] 2026-01-09 08:27:14,447 | INFO     | task id: 47898826
[2026-01-09 09:27:46] 2026-01-09 08:27:14,448 | INFO     | errors: (none)
[2026-01-09 09:27:46] 2026-01-09 08:27:14,448 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:27:46] 2026-01-09 08:27:14,448 | INFO     | pilot state: finished 
[2026-01-09 09:27:46] 2026-01-09 08:27:14,448 | INFO     | transexitcode: 0
[2026-01-09 09:27:46] 2026-01-09 08:27:14,448 | INFO     | exeerrorcode: 0
[2026-01-09 09:27:46] 2026-01-09 08:27:14,448 | INFO     | exeerrordiag: 
[2026-01-09 09:27:46] 2026-01-09 08:27:14,449 | INFO     | exitcode: 0
[2026-01-09 09:27:46] 2026-01-09 08:27:14,449 | INFO     | exitmsg: OK
[2026-01-09 09:27:46] 2026-01-09 08:27:14,449 | INFO     | cpuconsumptiontime: 104103 s
[2026-01-09 09:27:46] 2026-01-09 08:27:14,449 | INFO     | nevents: 400
[2026-01-09 09:27:46] 2026-01-09 08:27:14,449 | INFO     | neventsw: 0
[2026-01-09 09:27:46] 2026-01-09 08:27:14,449 | INFO     | pid: 1013431
[2026-01-09 09:27:46] 2026-01-09 08:27:14,449 | INFO     | pgrp: 1013431
[2026-01-09 09:27:46] 2026-01-09 08:27:14,450 | INFO     | corecount: 12
[2026-01-09 09:27:46] 2026-01-09 08:27:14,450 | INFO     | event service: False
[2026-01-09 09:27:46] 2026-01-09 08:27:14,450 | INFO     | sizes: {0: 2283143, 1: 2283999, 2: 2283999, 6: 2284289, 12: 2284317, 9206: 2312855, 9209: 2321853, 9212: 2321909, 9219: 2322167}
[2026-01-09 09:27:46] 2026-01-09 08:27:14,450 | INFO     | --------------------------------------------------
[2026-01-09 09:27:46] 2026-01-09 08:27:14,450 | INFO     | 
[2026-01-09 09:27:46] 2026-01-09 08:27:14,450 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-09 09:27:46] 2026-01-09 08:27:14,470 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,470 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,470 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,470 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,473 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:27:46] 2026-01-09 08:27:14,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,473 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:27:46] 2026-01-09 08:27:14,473 | INFO     | job 6963153558 has completed (purged errors)
[2026-01-09 09:27:46] 2026-01-09 08:27:14,474 | INFO     | overall cleanup function is called
[2026-01-09 09:27:46] 2026-01-09 08:27:15,483 | INFO     | --- collectZombieJob: --- 10, [1013431]
[2026-01-09 09:27:46] 2026-01-09 08:27:15,483 | INFO     | zombie collector waiting for pid 1013431
[2026-01-09 09:27:46] 2026-01-09 08:27:15,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:27:46] 2026-01-09 08:27:15,484 | INFO     | collected zombie processes
[2026-01-09 09:27:46] 2026-01-09 08:27:15,484 | INFO     | will attempt to kill all subprocesses of pid=1013431
[2026-01-09 09:27:46] 2026-01-09 08:27:15,664 | INFO     | process IDs to be killed: [1013431] (in reverse order)
[2026-01-09 09:27:46] 2026-01-09 08:27:15,723 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:27:46] 2026-01-09 08:27:15,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:27:46] 2026-01-09 08:27:15,729 | INFO     | did not find any defunct processes belonging to 1013431
[2026-01-09 09:27:46] 2026-01-09 08:27:15,735 | INFO     | did not find any defunct processes belonging to 1013431
[2026-01-09 09:27:46] 2026-01-09 08:27:15,735 | INFO     | ready for new job
[2026-01-09 09:27:46] 2026-01-09 08:27:15,735 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:27:46] 2026-01-09 08:27:15,737 | INFO     | ***************************************
[2026-01-09 09:27:46] 2026-01-09 08:27:15,737 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:27:46] 2026-01-09 08:27:15,738 | INFO     | ***************************************
[2026-01-09 09:27:46] 2026-01-09 08:27:15,738 | INFO     | 
[2026-01-09 09:27:46] 2026-01-09 08:27:15,739 | INFO     | architecture information:
[2026-01-09 09:27:46] 2026-01-09 08:27:15,740 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:27:46] 2026-01-09 08:27:15,754 | INFO     | cat /etc/os-release:
[2026-01-09 09:27:46] NAME="CentOS Linux"
[2026-01-09 09:27:46] VERSION="7 (Core)"
[2026-01-09 09:27:46] ID="centos"
[2026-01-09 09:27:46] ID_LIKE="rhel fedora"
[2026-01-09 09:27:46] VERSION_ID="7"
[2026-01-09 09:27:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:27:46] ANSI_COLOR="0;31"
[2026-01-09 09:27:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:27:46] HOME_URL="https://www.centos.org/"
[2026-01-09 09:27:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:27:46] 
[2026-01-09 09:27:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:27:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:27:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:27:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:27:46] 
[2026-01-09 09:27:46] 2026-01-09 08:27:15,755 | INFO     | ***************************************
[2026-01-09 09:27:46] 2026-01-09 08:27:16,258 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-09 09:27:46] 2026-01-09 08:27:16,276 | INFO     | sufficient remaining disk space (779808145408 B)
[2026-01-09 09:27:46] 2026-01-09 08:27:16,276 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:27:46] 2026-01-09 08:27:16,277 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:27:46] 2026-01-09 08:27:16,277 | INFO     | update_server=False
[2026-01-09 09:27:46] 2026-01-09 08:27:16,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:27:46] 2026-01-09 08:27:16,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:27:46] 2026-01-09 08:27:16,385 | INFO     | all payload control threads have been joined
[2026-01-09 09:27:46] 2026-01-09 08:27:16,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:27:46] 2026-01-09 08:27:16,477 | INFO     | aborting loop
[2026-01-09 09:27:46] 2026-01-09 08:27:16,602 | INFO     | all job control threads have been joined
[2026-01-09 09:27:46] 2026-01-09 08:27:16,884 | INFO     | all data control threads have been joined
[2026-01-09 09:27:46] 2026-01-09 08:27:17,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:27:46] 2026-01-09 08:27:17,283 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,283 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,391 | INFO     | [payload] control thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,435 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,482 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,527 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,608 | INFO     | [job] control thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,856 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,888 | INFO     | [data] control thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,943 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,944 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:17,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:27:46] 2026-01-09 08:27:18,085 | INFO     | [job] validate thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:18,570 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:18,735 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:19,119 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:21,998 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:27:46] 2026-01-09 08:27:32,979 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:27:46] 2026-01-09 08:27:33,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076083304256)>', '<ExcThread(monitor, started 140075677488896)>']
[2026-01-09 09:27:46] 2026-01-09 08:27:38,257 | INFO     | all workflow threads have been joined
[2026-01-09 09:27:46] 2026-01-09 08:27:38,258 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:27:46] 2026-01-09 08:27:38,258 | INFO     | traces error code: 0
[2026-01-09 09:27:46] 2026-01-09 08:27:38,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:27:46] 2026-01-09 08:27:46,412 | INFO     | PID=1005857 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 09:27:46] 2026-01-09 08:27:46,413 | INFO     | .. there are 2 such processes running
[2026-01-09 09:27:46] 2026-01-09 08:27:46,414 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:27:46] 2026-01-09 08:27:46,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:27:46] 2026-01-09 08:27:46,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:27:46] 2026-01-09 08:27:46,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:27:46] 2026-01-09 08:27:46,414 | INFO     | [monitor] control thread has ended
[2026-01-09 09:27:46] 2026-01-09 08:27:46,525 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:27:46] 2026-01-09 08:27:46,528 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:27:46] 2026-01-09 08:27:46,531 [wrapper] pilotpid: 1005857
[2026-01-09 09:27:46] 2026-01-09 08:27:46,533 [wrapper] Pilot exit status: 0
[2026-01-09 09:27:46] 2026-01-09 08:27:46,543 [wrapper] pandaids: 6963153558
[2026-01-09 09:27:46] 2026-01-09 08:27:46,578 [wrapper] cleanup supervisor_pilot 1085293 1005858
[2026-01-09 09:27:46] 2026-01-09 08:27:46,581 [wrapper] Test setup, not cleaning
[2026-01-09 09:27:46] 2026-01-09 08:27:46,583 [wrapper] apfmon messages muted
[2026-01-09 09:27:46] 2026-01-09 08:27:46,586 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:27:46] 2026-01-09 08:27:46,589 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:27:46]  *** Error codes and diagnostics ***
[2026-01-09 09:27:46]     "exeErrorCode": 0,
[2026-01-09 09:27:46]     "exeErrorDiag": "",
[2026-01-09 09:27:46]     "pilotErrorCode": 0,
[2026-01-09 09:27:46]     "pilotErrorDiag": "",
[2026-01-09 09:27:46]  *** Listing of results directory ***
[2026-01-09 09:27:46] total 442500
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 09:27:46] -rwx------. 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:27:46] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:53 run_atlas
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:53 job.xml
[2026-01-09 09:27:46] -rw-r--r--. 2 boinc boinc 224930050 Jan  9 06:53 EVNT.47898824._001170.pool.root.1
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc      6290 Jan  9 06:53 init_data.xml
[2026-01-09 09:27:46] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:53 start_atlas.sh
[2026-01-09 09:27:46] drwxrwx--x. 2 boinc boinc      4096 Jan  9 06:53 shared
[2026-01-09 09:27:46] -rw-r--r--. 2 boinc boinc    592398 Jan  9 06:53 input.tar.gz
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:53 boinc_lockfile
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc      2520 Jan  9 06:53 pandaJob.out
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc    989771 Jan  9 06:53 agis_schedconf.cvmfs.json
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc   1516240 Jan  9 06:53 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:27:46] drwx------. 5 boinc boinc      4096 Jan  9 06:53 pilot3
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc 220719346 Jan  9 09:26 HITS.47898826._030231.pool.root.1
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc       530 Jan  9 09:26 boinc_task_state.xml
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc      1022 Jan  9 09:26 memory_monitor_summary.json
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc    449250 Jan  9 09:27 log.47898826._030231.job.log.tgz.1
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc      7793 Jan  9 09:27 heartbeat.json
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:27 boinc_mmap_file
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc        28 Jan  9 09:27 wrapper_checkpoint.txt
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc        95 Jan  9 09:27 pilot_heartbeat.json
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc       822 Jan  9 09:27 pilotlog.txt
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc   1328725 Jan  9 09:27 log.47898826._030231.job.log.1
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc       357 Jan  9 09:27 output.list
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:27 runtime_log
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc   1802240 Jan  9 09:27 result.tar.gz
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc       660 Jan  9 09:27 RXRNDmCZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmL4fKDmRsFGom.diag
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc      8841 Jan  9 09:27 runtime_log.err
[2026-01-09 09:27:46] -rw-r--r--. 1 boinc boinc     21490 Jan  9 09:27 stderr.txt
[2026-01-09 09:27:46] HITS file was successfully produced:
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc 220719346 Jan  9 09:26 shared/HITS.pool.root.1
[2026-01-09 09:27:46]  *** Contents of shared directory: ***
[2026-01-09 09:27:46] total 437572
[2026-01-09 09:27:46] -rw-r--r--. 2 boinc boinc 224930050 Jan  9 06:53 ATLAS.root_0
[2026-01-09 09:27:46] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:53 start_atlas.sh
[2026-01-09 09:27:46] -rw-r--r--. 2 boinc boinc    592398 Jan  9 06:53 input.tar.gz
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc 220719346 Jan  9 09:26 HITS.pool.root.1
[2026-01-09 09:27:46] -rw-------. 1 boinc boinc   1802240 Jan  9 09:27 result.tar.gz
09:27:47 (1002023): run_atlas exited; CPU time 104285.090590
09:27:47 (1002023): called boinc_finish(0)

</stderr_txt>
]]>

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