Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:58:04 (32438): wrapper (7.7.26015): starting
07:58:04 (32438): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:58:04] Arguments: --nthreads 8
[2026-01-09 07:58:04] Threads: 8
[2026-01-09 07:58:04] Checking for CVMFS
[2026-01-09 07:58:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:58:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:58:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:58:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:58:04] 2.11.2.0 21292 35067 128188 154934 3 56 24844744 25165824 0 130560 0 7733178 99.576 11322192 5198 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 07:58:04] CVMFS is ok
[2026-01-09 07:58:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:58:04] Checking for apptainer binary...
[2026-01-09 07:58:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:58:04] Running /usr/bin/apptainer --version
[2026-01-09 07:58:04] apptainer version 1.3.2-1.el7
[2026-01-09 07:58:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:58:06] cg-vwn383.simple-grid.lan
[2026-01-09 07:58:06] apptainer works
[2026-01-09 07:58:06] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:58:06] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:58:06] Starting ATLAS job with PandaID=6963153394
[2026-01-09 07:58:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:44:43]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:44:43] 2026-01-09 09:44:25,077 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 10:44:43] 2026-01-09 09:44:25,078 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 10:44:43] 2026-01-09 09:44:25,080 | INFO     | using path: /var/lib/boinc/slots/25/PanDA_Pilot-6963153394/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,081 | INFO     | extracted standard info from prmon json
[2026-01-09 10:44:43] 2026-01-09 09:44:25,081 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:44:43] 2026-01-09 09:44:25,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:44:43] 2026-01-09 09:44:25,082 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:44:43] 2026-01-09 09:44:25,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:44:43] 2026-01-09 09:44:25,086 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:44:43] 2026-01-09 09:44:25,086 | INFO     | sum of square deviations: 1342841922.0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,087 | INFO     | sum of deviations: 20163168079.0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,088 | INFO     | mean x: 1767946874.0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,088 | INFO     | mean y: 2458640.5521472394
[2026-01-09 10:44:43] 2026-01-09 09:44:25,088 | INFO     | intersect: -26543785851.213604
[2026-01-09 10:44:43] 2026-01-09 09:44:25,088 | INFO     | chi2: 2.3148994935005627
[2026-01-09 10:44:43] 2026-01-09 09:44:25,089 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 10:44:43] 2026-01-09 09:44:25,090 | INFO     | sum of deviations: 30629316004.5
[2026-01-09 10:44:43] 2026-01-09 09:44:25,090 | INFO     | mean x: 1767946721.5
[2026-01-09 10:44:43] 2026-01-09 09:44:25,090 | INFO     | mean y: 2471596.841772152
[2026-01-09 10:44:43] 2026-01-09 09:44:25,090 | INFO     | intersect: -44274120236.71803
[2026-01-09 10:44:43] 2026-01-09 09:44:25,091 | INFO     | chi2: 1.439400405875029
[2026-01-09 10:44:43] 2026-01-09 09:44:25,091 | INFO     | current chi2=1.439400405875029 (change=37.82017707825469 %)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,091 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,092 | INFO     | sum of deviations: 29447358807.000004
[2026-01-09 10:44:43] 2026-01-09 09:44:25,092 | INFO     | mean x: 1767946569.0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,092 | INFO     | mean y: 2469995.248366013
[2026-01-09 10:44:43] 2026-01-09 09:44:25,093 | INFO     | intersect: -46876851804.87981
[2026-01-09 10:44:43] 2026-01-09 09:44:25,093 | INFO     | chi2: 1.4399332244742302
[2026-01-09 10:44:43] 2026-01-09 09:44:25,093 | INFO     | current chi2=1.4399332244742302 (change=-0.03701670480476093 %)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,093 | INFO     | right removable region: 152
[2026-01-09 10:44:43] 2026-01-09 09:44:25,093 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 10:44:43] 2026-01-09 09:44:25,095 | INFO     | sum of deviations: -3437430367.499998
[2026-01-09 10:44:43] 2026-01-09 09:44:25,095 | INFO     | mean x: 1767947026.5
[2026-01-09 10:44:43] 2026-01-09 09:44:25,095 | INFO     | mean y: 2488226.2721518986
[2026-01-09 10:44:43] 2026-01-09 09:44:25,095 | INFO     | intersect: 4971509655.687576
[2026-01-09 10:44:43] 2026-01-09 09:44:25,095 | INFO     | chi2: 0.926925623429155
[2026-01-09 10:44:43] 2026-01-09 09:44:25,096 | INFO     | current chi2=0.926925623429155 (change=59.958277841796516 %)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,096 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,097 | INFO     | sum of deviations: -6203084082.999999
[2026-01-09 10:44:43] 2026-01-09 09:44:25,097 | INFO     | mean x: 1767947179.0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,098 | INFO     | mean y: 2491966.3986928104
[2026-01-09 10:44:43] 2026-01-09 09:44:25,098 | INFO     | intersect: 9877621247.787579
[2026-01-09 10:44:43] 2026-01-09 09:44:25,098 | INFO     | chi2: 0.9045487548095195
[2026-01-09 10:44:43] 2026-01-09 09:44:25,098 | INFO     | current chi2=0.9045487548095195 (change=2.4140953765904576 %)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,098 | INFO     | left removable region: 20
[2026-01-09 10:44:43] 2026-01-09 09:44:25,099 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,100 | INFO     | sum of deviations: 3058672248.0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,100 | INFO     | mean x: 1767947148.5
[2026-01-09 10:44:43] 2026-01-09 09:44:25,100 | INFO     | mean y: 2508161.984848485
[2026-01-09 10:44:43] 2026-01-09 09:44:25,100 | INFO     | intersect: -7580245174.343534
[2026-01-09 10:44:43] 2026-01-09 09:44:25,100 | INFO     | chi2: 0.001011787545601475
[2026-01-09 10:44:43] 2026-01-09 09:44:25,101 | INFO     | current memory leak: 4.29 B/s (using 132 data points, chi2=0.00)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,101 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,101 | INFO     | ..............................
[2026-01-09 10:44:43] 2026-01-09 09:44:25,101 | INFO     | . Timing measurements:
[2026-01-09 10:44:43] 2026-01-09 09:44:25,101 | INFO     | . get job = 0 s
[2026-01-09 10:44:43] 2026-01-09 09:44:25,102 | INFO     | . initial setup = 1 s
[2026-01-09 10:44:43] 2026-01-09 09:44:25,102 | INFO     | . payload setup = 7 s
[2026-01-09 10:44:43] 2026-01-09 09:44:25,102 | INFO     | . stage-in = 0 s
[2026-01-09 10:44:43] 2026-01-09 09:44:25,102 | INFO     | . payload execution = 9926 s
[2026-01-09 10:44:43] 2026-01-09 09:44:25,102 | INFO     | . stage-out = 1 s
[2026-01-09 10:44:43] 2026-01-09 09:44:25,102 | INFO     | . log creation = 0 s
[2026-01-09 10:44:43] 2026-01-09 09:44:25,102 | INFO     | ..............................
[2026-01-09 10:44:43] 2026-01-09 09:44:25,243 | INFO     | time since job start (9964s) is within the limit (349056.0s)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,376 | INFO     | 
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | job summary report
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | --------------------------------------------------
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | PanDA job id: 6963153394
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | task id: 47898826
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | errors: (none)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | pilot state: finished 
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | transexitcode: 0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | exeerrorcode: 0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | exeerrordiag: 
[2026-01-09 10:44:43] 2026-01-09 09:44:25,377 | INFO     | exitcode: 0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | exitmsg: OK
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | cpuconsumptiontime: 74755 s
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | nevents: 400
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | neventsw: 0
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | pid: 10208
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | pgrp: 10208
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | corecount: 8
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | event service: False
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | sizes: {0: 2283801, 1: 2284000, 6: 2284262, 12: 2284290, 9938: 2312634, 9939: 2321634, 9940: 2321818, 9947: 2322076}
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | --------------------------------------------------
[2026-01-09 10:44:43] 2026-01-09 09:44:25,378 | INFO     | 
[2026-01-09 10:44:43] 2026-01-09 09:44:25,379 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2026-01-09 10:44:43] 2026-01-09 09:44:25,403 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,404 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,404 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,404 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,405 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,406 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:44:43] 2026-01-09 09:44:25,406 | INFO     | job 6963153394 has completed (purged errors)
[2026-01-09 10:44:43] 2026-01-09 09:44:25,406 | INFO     | overall cleanup function is called
[2026-01-09 10:44:43] 2026-01-09 09:44:26,414 | INFO     | --- collectZombieJob: --- 10, [10208]
[2026-01-09 10:44:43] 2026-01-09 09:44:26,414 | INFO     | zombie collector waiting for pid 10208
[2026-01-09 10:44:43] 2026-01-09 09:44:26,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:44:43] 2026-01-09 09:44:26,415 | INFO     | collected zombie processes
[2026-01-09 10:44:43] 2026-01-09 09:44:26,415 | INFO     | will attempt to kill all subprocesses of pid=10208
[2026-01-09 10:44:43] 2026-01-09 09:44:26,479 | INFO     | process IDs to be killed: [10208] (in reverse order)
[2026-01-09 10:44:43] 2026-01-09 09:44:26,535 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:44:43] 2026-01-09 09:44:26,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:44:43] 2026-01-09 09:44:26,537 | INFO     | did not find any defunct processes belonging to 10208
[2026-01-09 10:44:43] 2026-01-09 09:44:26,539 | INFO     | did not find any defunct processes belonging to 10208
[2026-01-09 10:44:43] 2026-01-09 09:44:26,539 | INFO     | ready for new job
[2026-01-09 10:44:43] 2026-01-09 09:44:26,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:44:43] 2026-01-09 09:44:26,541 | INFO     | ***************************************
[2026-01-09 10:44:43] 2026-01-09 09:44:26,541 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:44:43] 2026-01-09 09:44:26,541 | INFO     | ***************************************
[2026-01-09 10:44:43] 2026-01-09 09:44:26,541 | INFO     | 
[2026-01-09 10:44:43] 2026-01-09 09:44:26,542 | INFO     | pilot is running in a VM
[2026-01-09 10:44:43] 2026-01-09 09:44:26,542 | INFO     | architecture information:
[2026-01-09 10:44:43] 2026-01-09 09:44:26,542 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:44:43] 2026-01-09 09:44:26,560 | INFO     | cat /etc/os-release:
[2026-01-09 10:44:43] NAME="CentOS Linux"
[2026-01-09 10:44:43] VERSION="7 (Core)"
[2026-01-09 10:44:43] ID="centos"
[2026-01-09 10:44:43] ID_LIKE="rhel fedora"
[2026-01-09 10:44:43] VERSION_ID="7"
[2026-01-09 10:44:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:44:43] ANSI_COLOR="0;31"
[2026-01-09 10:44:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:44:43] HOME_URL="https://www.centos.org/"
[2026-01-09 10:44:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:44:43] 
[2026-01-09 10:44:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:44:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:44:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:44:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:44:43] 
[2026-01-09 10:44:43] 2026-01-09 09:44:26,561 | INFO     | ***************************************
[2026-01-09 10:44:43] 2026-01-09 09:44:27,064 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2026-01-09 10:44:43] 2026-01-09 09:44:27,089 | INFO     | sufficient remaining disk space (498107154432 B)
[2026-01-09 10:44:43] 2026-01-09 09:44:27,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:44:43] 2026-01-09 09:44:27,090 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:44:43] 2026-01-09 09:44:27,090 | INFO     | update_server=False
[2026-01-09 10:44:43] 2026-01-09 09:44:27,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:44:43] 2026-01-09 09:44:27,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:44:43] 2026-01-09 09:44:27,091 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 10:44:43] 2026-01-09 09:44:27,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:44:43] 2026-01-09 09:44:27,091 | INFO     | aborting loop
[2026-01-09 10:44:43] 2026-01-09 09:44:27,092 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:44:43] 2026-01-09 09:44:27,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:44:43] 2026-01-09 09:44:27,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:44:43] 2026-01-09 09:44:27,094 | INFO     | all data control threads have been joined
[2026-01-09 10:44:43] 2026-01-09 09:44:27,314 | INFO     | all payload control threads have been joined
[2026-01-09 10:44:43] 2026-01-09 09:44:27,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:44:43] 2026-01-09 09:44:28,096 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:28,096 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:28,098 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:28,099 | INFO     | [data] control thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:28,174 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:28,267 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:28,319 | INFO     | [payload] control thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:28,372 | INFO     | [job] validate thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:28,501 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:28,551 | INFO     | all job control threads have been joined
[2026-01-09 10:44:43] 2026-01-09 09:44:28,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:44:43] 2026-01-09 09:44:28,864 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:29,183 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:29,478 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:29,557 | INFO     | [job] control thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:29,587 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:32,729 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:37,121 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:44:43] 2026-01-09 09:44:37,172 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:44:43] 2026-01-09 09:44:38,126 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:44:43] 2026-01-09 09:44:38,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680380057408)>', '<ExcThread(monitor, started 139679642937088)>']
[2026-01-09 10:44:43] 2026-01-09 09:44:39,155 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:44:43] 2026-01-09 09:44:39,156 | INFO     | [monitor] control thread has ended
[2026-01-09 10:44:43] 2026-01-09 09:44:43,296 | INFO     | all workflow threads have been joined
[2026-01-09 10:44:43] 2026-01-09 09:44:43,296 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:44:43] 2026-01-09 09:44:43,297 | INFO     | traces error code: 0
[2026-01-09 10:44:43] 2026-01-09 09:44:43,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:44:43] 2026-01-09 09:44:43,451 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:44:43] 2026-01-09 09:44:43,455 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:44:43] 2026-01-09 09:44:43,460 [wrapper] pilotpid: 3772
[2026-01-09 10:44:43] 2026-01-09 09:44:43,466 [wrapper] Pilot exit status: 0
[2026-01-09 10:44:43] 2026-01-09 09:44:43,494 [wrapper] pandaids: 6963153394
[2026-01-09 10:44:43] 2026-01-09 09:44:43,529 [wrapper] cleanup supervisor_pilot 29130 3773
[2026-01-09 10:44:43] 2026-01-09 09:44:43,537 [wrapper] Test setup, not cleaning
[2026-01-09 10:44:43] 2026-01-09 09:44:43,541 [wrapper] apfmon messages muted
[2026-01-09 10:44:43] 2026-01-09 09:44:43,545 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:44:43] 2026-01-09 09:44:43,549 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:44:43]  *** Error codes and diagnostics ***
[2026-01-09 10:44:43]     "exeErrorCode": 0,
[2026-01-09 10:44:43]     "exeErrorDiag": "",
[2026-01-09 10:44:43]     "pilotErrorCode": 0,
[2026-01-09 10:44:43]     "pilotErrorDiag": "",
[2026-01-09 10:44:43]  *** Listing of results directory ***
[2026-01-09 10:44:43] total 441412
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 10:44:43] -rwx------. 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc       100 Jan  9 07:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:44:43] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 07:58 run_atlas
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc       105 Jan  9 07:58 job.xml
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc      6391 Jan  9 07:58 init_data.xml
[2026-01-09 10:44:43] -rw-r--r--. 2 boinc boinc 223108470 Jan  9 07:58 EVNT.47898824._001163.pool.root.1
[2026-01-09 10:44:43] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:58 start_atlas.sh
[2026-01-09 10:44:43] drwxrwx--x. 2 boinc boinc        68 Jan  9 07:58 shared
[2026-01-09 10:44:43] -rw-r--r--. 2 boinc boinc    592393 Jan  9 07:58 input.tar.gz
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc         0 Jan  9 07:58 boinc_lockfile
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc      2520 Jan  9 07:58 pandaJob.out
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc    989771 Jan  9 07:58 agis_schedconf.cvmfs.json
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc   1516240 Jan  9 07:58 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:44:43] drwx------. 5 boinc boinc      4096 Jan  9 07:58 pilot3
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc 221512262 Jan  9 10:43 HITS.47898826._030067.pool.root.1
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc       530 Jan  9 10:43 boinc_task_state.xml
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc      1010 Jan  9 10:44 memory_monitor_summary.json
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc    403727 Jan  9 10:44 log.47898826._030067.job.log.tgz.1
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc      8192 Jan  9 10:44 boinc_mmap_file
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc        28 Jan  9 10:44 wrapper_checkpoint.txt
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc      7780 Jan  9 10:44 heartbeat.json
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc        95 Jan  9 10:44 pilot_heartbeat.json
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc      4688 Jan  9 10:44 pilotlog.txt
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc   1341857 Jan  9 10:44 log.47898826._030067.job.log.1
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc       357 Jan  9 10:44 output.list
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc       620 Jan  9 10:44 runtime_log
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc   1761280 Jan  9 10:44 result.tar.gz
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc       653 Jan  9 10:44 Ua4KDmBZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSHlKDmX6bkgn.diag
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc      8832 Jan  9 10:44 runtime_log.err
[2026-01-09 10:44:43] -rw-r--r--. 1 boinc boinc     20635 Jan  9 10:44 stderr.txt
[2026-01-09 10:44:43] HITS file was successfully produced:
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc 221512262 Jan  9 10:43 shared/HITS.pool.root.1
[2026-01-09 10:44:43]  *** Contents of shared directory: ***
[2026-01-09 10:44:43] total 436520
[2026-01-09 10:44:43] -rw-r--r--. 2 boinc boinc 223108470 Jan  9 07:58 ATLAS.root_0
[2026-01-09 10:44:43] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:58 start_atlas.sh
[2026-01-09 10:44:43] -rw-r--r--. 2 boinc boinc    592393 Jan  9 07:58 input.tar.gz
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc 221512262 Jan  9 10:43 HITS.pool.root.1
[2026-01-09 10:44:43] -rw-------. 1 boinc boinc   1761280 Jan  9 10:44 result.tar.gz
10:44:44 (32438): run_atlas exited; CPU time 74826.717824
10:44:44 (32438): called boinc_finish(0)

</stderr_txt>
]]>

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