Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:10:24 (28902): wrapper (7.7.26015): starting
07:10:24 (28902): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:10:24] Arguments: --nthreads 8
[2026-01-09 07:10:24] Threads: 8
[2026-01-09 07:10:24] Checking for CVMFS
[2026-01-09 07:10:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:10:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:10:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:10:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:10:25] 2.11.2.0 20999 35036 94800 154933 0 57 14264120 25165825 0 130560 0 15120399 99.788 9529508 3004 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 07:10:25] CVMFS is ok
[2026-01-09 07:10:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:10:25] Checking for apptainer binary...
[2026-01-09 07:10:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:10:25] Running /usr/bin/apptainer --version
[2026-01-09 07:10:25] apptainer version 1.3.2-1.el7
[2026-01-09 07:10:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:10:26] cg-vwn368.simple-grid.lan
[2026-01-09 07:10:26] apptainer works
[2026-01-09 07:10:26] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:10:26] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:10:26] Starting ATLAS job with PandaID=6963154050
[2026-01-09 07:10:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:59:08]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:59:08] 2026-01-09 08:58:06,084 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 09:59:08] 2026-01-09 08:58:06,086 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963154050/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:59:08] 2026-01-09 08:58:06,087 | INFO     | extracted standard info from prmon json
[2026-01-09 09:59:08] 2026-01-09 08:58:06,087 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:59:08] 2026-01-09 08:58:06,087 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:59:08] 2026-01-09 08:58:06,087 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:59:08] 2026-01-09 08:58:06,087 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:59:08] 2026-01-09 08:58:06,091 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:59:08] 2026-01-09 08:58:06,092 | INFO     | sum of square deviations: 1367709365.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,093 | INFO     | sum of deviations: 23263786763.499996
[2026-01-09 09:59:08] 2026-01-09 08:58:06,093 | INFO     | mean x: 1767944053.5
[2026-01-09 09:59:08] 2026-01-09 08:58:06,093 | INFO     | mean y: 2491251.701219512
[2026-01-09 09:59:08] 2026-01-09 08:58:06,093 | INFO     | intersect: -30069009699.39582
[2026-01-09 09:59:08] 2026-01-09 08:58:06,094 | INFO     | chi2: 1.53569489995843
[2026-01-09 09:59:08] 2026-01-09 08:58:06,094 | INFO     | sum of square deviations: 1246386160.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,095 | INFO     | sum of deviations: 22568115039.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,095 | INFO     | mean x: 1767943901.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,095 | INFO     | mean y: 2490377.0754716983
[2026-01-09 09:59:08] 2026-01-09 08:58:06,095 | INFO     | intersect: -32009387338.468506
[2026-01-09 09:59:08] 2026-01-09 08:58:06,095 | INFO     | chi2: 1.5369161056475658
[2026-01-09 09:59:08] 2026-01-09 08:58:06,095 | INFO     | current chi2=1.5369161056475658 (change=-0.07952137427616121 %)
[2026-01-09 09:59:08] 2026-01-09 08:58:06,095 | INFO     | right removable region: 158
[2026-01-09 09:59:08] 2026-01-09 08:58:06,096 | INFO     | sum of square deviations: 1246386160.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,097 | INFO     | sum of deviations: -3156755002.000002
[2026-01-09 09:59:08] 2026-01-09 08:58:06,097 | INFO     | mean x: 1767944206.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,097 | INFO     | mean y: 2524075.823899371
[2026-01-09 09:59:08] 2026-01-09 08:58:06,097 | INFO     | intersect: 4480242855.650066
[2026-01-09 09:59:08] 2026-01-09 08:58:06,097 | INFO     | chi2: 0.05413631166220609
[2026-01-09 09:59:08] 2026-01-09 08:58:06,098 | INFO     | current chi2=0.05413631166220609 (change=96.47480032240314 %)
[2026-01-09 09:59:08] 2026-01-09 08:58:06,098 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 09:59:08] 2026-01-09 08:58:06,099 | INFO     | sum of deviations: -6928620340.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,099 | INFO     | mean x: 1767944358.5
[2026-01-09 09:59:08] 2026-01-09 08:58:06,099 | INFO     | mean y: 2529050.5194805195
[2026-01-09 09:59:08] 2026-01-09 08:58:06,099 | INFO     | intersect: 10819186671.305729
[2026-01-09 09:59:08] 2026-01-09 08:58:06,099 | INFO     | chi2: 0.01322969186436255
[2026-01-09 09:59:08] 2026-01-09 08:58:06,099 | INFO     | current chi2=0.01322969186436255 (change=75.5622585688664 %)
[2026-01-09 09:59:08] 2026-01-09 08:58:06,100 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,101 | INFO     | sum of deviations: -6769161582.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,101 | INFO     | mean x: 1767944511.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,101 | INFO     | mean y: 2528816.724832215
[2026-01-09 09:59:08] 2026-01-09 08:58:06,101 | INFO     | intersect: 11670244672.203686
[2026-01-09 09:59:08] 2026-01-09 08:58:06,101 | INFO     | chi2: 0.012762255460210028
[2026-01-09 09:59:08] 2026-01-09 08:58:06,101 | INFO     | current chi2=0.012762255460210028 (change=3.533237273739366 %)
[2026-01-09 09:59:08] 2026-01-09 08:58:06,101 | INFO     | left removable region: 30
[2026-01-09 09:59:08] 2026-01-09 08:58:06,101 | INFO     | sum of square deviations: 650252192.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,102 | INFO     | sum of deviations: -4152746166.0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,102 | INFO     | mean x: 1767944785.5
[2026-01-09 09:59:08] 2026-01-09 08:58:06,102 | INFO     | mean y: 2524974.75
[2026-01-09 09:59:08] 2026-01-09 08:58:06,102 | INFO     | intersect: 11293261122.98711
[2026-01-09 09:59:08] 2026-01-09 08:58:06,103 | INFO     | chi2: 0.011977557601777081
[2026-01-09 09:59:08] 2026-01-09 08:58:06,103 | INFO     | current memory leak: -6.39 B/s (using 128 data points, chi2=0.01)
[2026-01-09 09:59:08] 2026-01-09 08:58:06,103 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 09:59:08] 2026-01-09 08:58:06,103 | INFO     | ..............................
[2026-01-09 09:59:08] 2026-01-09 08:58:06,104 | INFO     | . Timing measurements:
[2026-01-09 09:59:08] 2026-01-09 08:58:06,104 | INFO     | . get job = 0 s
[2026-01-09 09:59:08] 2026-01-09 08:58:06,104 | INFO     | . initial setup = 2 s
[2026-01-09 09:59:08] 2026-01-09 08:58:06,104 | INFO     | . payload setup = 9 s
[2026-01-09 09:59:08] 2026-01-09 08:58:06,104 | INFO     | . stage-in = 0 s
[2026-01-09 09:59:08] 2026-01-09 08:58:06,104 | INFO     | . payload execution = 10001 s
[2026-01-09 09:59:08] 2026-01-09 08:58:06,104 | INFO     | . stage-out = 1 s
[2026-01-09 09:59:08] 2026-01-09 08:58:06,104 | INFO     | . log creation = 0 s
[2026-01-09 09:59:08] 2026-01-09 08:58:06,104 | INFO     | ..............................
[2026-01-09 09:59:08] 2026-01-09 08:58:06,217 | INFO     | 
[2026-01-09 09:59:08] 2026-01-09 08:58:06,217 | INFO     | job summary report
[2026-01-09 09:59:08] 2026-01-09 08:58:06,217 | INFO     | --------------------------------------------------
[2026-01-09 09:59:08] 2026-01-09 08:58:06,217 | INFO     | PanDA job id: 6963154050
[2026-01-09 09:59:08] 2026-01-09 08:58:06,217 | INFO     | task id: 47898826
[2026-01-09 09:59:08] 2026-01-09 08:58:06,217 | INFO     | errors: (none)
[2026-01-09 09:59:08] 2026-01-09 08:58:06,218 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:59:08] 2026-01-09 08:58:06,218 | INFO     | pilot state: finished 
[2026-01-09 09:59:08] 2026-01-09 08:58:06,218 | INFO     | transexitcode: 0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,218 | INFO     | exeerrorcode: 0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,218 | INFO     | exeerrordiag: 
[2026-01-09 09:59:08] 2026-01-09 08:58:06,218 | INFO     | exitcode: 0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,218 | INFO     | exitmsg: OK
[2026-01-09 09:59:08] 2026-01-09 08:58:06,218 | INFO     | cpuconsumptiontime: 74982 s
[2026-01-09 09:59:08] 2026-01-09 08:58:06,218 | INFO     | nevents: 400
[2026-01-09 09:59:08] 2026-01-09 08:58:06,219 | INFO     | neventsw: 0
[2026-01-09 09:59:08] 2026-01-09 08:58:06,219 | INFO     | pid: 6657
[2026-01-09 09:59:08] 2026-01-09 08:58:06,219 | INFO     | pgrp: 6657
[2026-01-09 09:59:08] 2026-01-09 08:58:06,219 | INFO     | corecount: 8
[2026-01-09 09:59:08] 2026-01-09 08:58:06,219 | INFO     | event service: False
[2026-01-09 09:59:08] 2026-01-09 08:58:06,219 | INFO     | sizes: {0: 2283800, 1: 2283999, 7: 2284261, 12: 2284289, 10014: 2312875, 10015: 2321873, 10017: 2322057, 10024: 2322315}
[2026-01-09 09:59:08] 2026-01-09 08:58:06,219 | INFO     | --------------------------------------------------
[2026-01-09 09:59:08] 2026-01-09 08:58:06,219 | INFO     | 
[2026-01-09 09:59:08] 2026-01-09 08:58:06,219 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 09:59:08] 2026-01-09 08:58:06,257 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,258 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,258 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,258 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,258 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,258 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,258 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,258 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,259 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,259 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,259 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,259 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,260 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:59:08] 2026-01-09 08:58:06,260 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,260 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:59:08] 2026-01-09 08:58:06,260 | INFO     | job 6963154050 has completed (purged errors)
[2026-01-09 09:59:08] 2026-01-09 08:58:06,260 | INFO     | overall cleanup function is called
[2026-01-09 09:59:08] 2026-01-09 08:58:07,269 | INFO     | --- collectZombieJob: --- 10, [6657]
[2026-01-09 09:59:08] 2026-01-09 08:58:07,269 | INFO     | zombie collector waiting for pid 6657
[2026-01-09 09:59:08] 2026-01-09 08:58:07,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:59:08] 2026-01-09 08:58:07,269 | INFO     | collected zombie processes
[2026-01-09 09:59:08] 2026-01-09 08:58:07,269 | INFO     | will attempt to kill all subprocesses of pid=6657
[2026-01-09 09:59:08] 2026-01-09 08:58:07,332 | INFO     | process IDs to be killed: [6657] (in reverse order)
[2026-01-09 09:59:08] 2026-01-09 08:58:07,391 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:59:08] 2026-01-09 08:58:07,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:59:08] 2026-01-09 08:58:07,394 | INFO     | did not find any defunct processes belonging to 6657
[2026-01-09 09:59:08] 2026-01-09 08:58:07,395 | INFO     | did not find any defunct processes belonging to 6657
[2026-01-09 09:59:08] 2026-01-09 08:58:07,396 | INFO     | ready for new job
[2026-01-09 09:59:08] 2026-01-09 08:58:07,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:59:08] 2026-01-09 08:58:07,398 | INFO     | ***************************************
[2026-01-09 09:59:08] 2026-01-09 08:58:07,398 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:59:08] 2026-01-09 08:58:07,398 | INFO     | ***************************************
[2026-01-09 09:59:08] 2026-01-09 08:58:07,398 | INFO     | 
[2026-01-09 09:59:08] 2026-01-09 08:58:07,399 | INFO     | pilot is running in a VM
[2026-01-09 09:59:08] 2026-01-09 08:58:07,399 | INFO     | architecture information:
[2026-01-09 09:59:08] 2026-01-09 08:58:07,399 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:59:08] 2026-01-09 08:58:07,422 | INFO     | cat /etc/os-release:
[2026-01-09 09:59:08] NAME="CentOS Linux"
[2026-01-09 09:59:08] VERSION="7 (Core)"
[2026-01-09 09:59:08] ID="centos"
[2026-01-09 09:59:08] ID_LIKE="rhel fedora"
[2026-01-09 09:59:08] VERSION_ID="7"
[2026-01-09 09:59:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:59:08] ANSI_COLOR="0;31"
[2026-01-09 09:59:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:59:08] HOME_URL="https://www.centos.org/"
[2026-01-09 09:59:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:59:08] 
[2026-01-09 09:59:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:59:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:59:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:59:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:59:08] 
[2026-01-09 09:59:08] 2026-01-09 08:58:07,423 | INFO     | ***************************************
[2026-01-09 09:59:08] 2026-01-09 08:58:07,926 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 09:59:08] 2026-01-09 08:58:07,948 | INFO     | sufficient remaining disk space (498120785920 B)
[2026-01-09 09:59:08] 2026-01-09 08:58:07,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:59:08] 2026-01-09 08:58:07,949 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:59:08] 2026-01-09 08:58:07,949 | INFO     | update_server=False
[2026-01-09 09:59:08] 2026-01-09 08:58:07,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:59:08] 2026-01-09 08:58:07,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:59:08] 2026-01-09 08:58:08,368 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:59:08] 2026-01-09 08:58:08,386 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 09:59:08] 2026-01-09 08:58:08,387 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 09:59:08] 2026-01-09 08:58:08,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:59:08] 2026-01-09 08:58:08,387 | INFO     | will abort loop
[2026-01-09 09:59:08] 2026-01-09 08:58:08,428 | INFO     | all payload control threads have been joined
[2026-01-09 09:59:08] 2026-01-09 08:58:08,916 | INFO     | all data control threads have been joined
[2026-01-09 09:59:08] 2026-01-09 08:58:08,952 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:08,955 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:09,054 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:09,127 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:09,245 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:09,393 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:09,433 | INFO     | [payload] control thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:09,490 | INFO     | all job control threads have been joined
[2026-01-09 09:59:08] 2026-01-09 08:58:09,517 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:09,922 | INFO     | [data] control thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:10,013 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:10,062 | INFO     | [job] validate thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:10,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:59:08] 2026-01-09 08:58:10,374 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:10,478 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:10,496 | INFO     | [job] control thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:14,097 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:18,293 | INFO     | job.realtimelogging is not enabled
[2026-01-09 09:59:08] 2026-01-09 08:58:19,299 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:59:08] 2026-01-09 08:58:38,698 | INFO     | PID=32621 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:59:08] 2026-01-09 08:58:38,698 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:59:08] 2026-01-09 08:58:38,698 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:59:08] 2026-01-09 08:58:38,698 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:59:08] 2026-01-09 08:59:01,623 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:59:08] 2026-01-09 08:59:03,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825775777600)>', '<ExcThread(monitor, started 139825210455808)>']
[2026-01-09 09:59:08] 2026-01-09 08:59:03,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:59:08] 2026-01-09 08:59:03,827 | INFO     | [monitor] control thread has ended
[2026-01-09 09:59:08] 2026-01-09 08:59:08,213 | INFO     | all workflow threads have been joined
[2026-01-09 09:59:08] 2026-01-09 08:59:08,213 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:59:08] 2026-01-09 08:59:08,213 | INFO     | traces error code: 0
[2026-01-09 09:59:08] 2026-01-09 08:59:08,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:59:08] 2026-01-09 08:59:08,381 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:59:08] 2026-01-09 08:59:08,389 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:59:08] 2026-01-09 08:59:08,395 [wrapper] pilotpid: 32621
[2026-01-09 09:59:08] 2026-01-09 08:59:08,400 [wrapper] Pilot exit status: 0
[2026-01-09 09:59:08] 2026-01-09 08:59:08,428 [wrapper] pandaids: 6963154050
[2026-01-09 09:59:08] 2026-01-09 08:59:08,471 [wrapper] cleanup supervisor_pilot 25578 32622
[2026-01-09 09:59:08] 2026-01-09 08:59:08,478 [wrapper] Test setup, not cleaning
[2026-01-09 09:59:08] 2026-01-09 08:59:08,483 [wrapper] apfmon messages muted
[2026-01-09 09:59:08] 2026-01-09 08:59:08,489 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:59:08] 2026-01-09 08:59:08,493 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:59:08]  *** Error codes and diagnostics ***
[2026-01-09 09:59:08]     "exeErrorCode": 0,
[2026-01-09 09:59:08]     "exeErrorDiag": "",
[2026-01-09 09:59:08]     "pilotErrorCode": 0,
[2026-01-09 09:59:08]     "pilotErrorDiag": "",
[2026-01-09 09:59:08]  *** Listing of results directory ***
[2026-01-09 09:59:08] total 446072
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 09:59:08] -rwx------. 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc       100 Jan  9 07:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:59:08] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 07:10 run_atlas
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc       105 Jan  9 07:10 job.xml
[2026-01-09 09:59:08] -rw-r--r--. 2 boinc boinc 226333359 Jan  9 07:10 EVNT.47898824._001179.pool.root.1
[2026-01-09 09:59:08] -rw-r--r--. 2 boinc boinc    592400 Jan  9 07:10 input.tar.gz
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc      6389 Jan  9 07:10 init_data.xml
[2026-01-09 09:59:08] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:10 start_atlas.sh
[2026-01-09 09:59:08] drwxrwx--x. 2 boinc boinc        68 Jan  9 07:10 shared
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc         0 Jan  9 07:10 boinc_lockfile
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc      2520 Jan  9 07:10 pandaJob.out
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc    989771 Jan  9 07:10 agis_schedconf.cvmfs.json
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc   1516240 Jan  9 07:10 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:59:08] drwx------. 5 boinc boinc      4096 Jan  9 07:10 pilot3
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc 223035248 Jan  9 09:57 HITS.47898826._030466.pool.root.1
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc       531 Jan  9 09:57 boinc_task_state.xml
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc        95 Jan  9 09:57 pilot_heartbeat.json
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc      1017 Jan  9 09:57 memory_monitor_summary.json
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc    405813 Jan  9 09:57 log.47898826._030466.job.log.tgz.1
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc      7780 Jan  9 09:58 heartbeat.json
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:58 boinc_mmap_file
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc        28 Jan  9 09:58 wrapper_checkpoint.txt
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc      5067 Jan  9 09:59 pilotlog.txt
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc   1350470 Jan  9 09:59 log.47898826._030466.job.log.1
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc       357 Jan  9 09:59 output.list
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:59 runtime_log
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc   1771520 Jan  9 09:59 result.tar.gz
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc       655 Jan  9 09:59 wXBNDmMZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBIlKDmGlLRbm.diag
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc      8817 Jan  9 09:59 runtime_log.err
[2026-01-09 09:59:08] -rw-r--r--. 1 boinc boinc     20718 Jan  9 09:59 stderr.txt
[2026-01-09 09:59:08] HITS file was successfully produced:
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc 223035248 Jan  9 09:57 shared/HITS.pool.root.1
[2026-01-09 09:59:08]  *** Contents of shared directory: ***
[2026-01-09 09:59:08] total 441168
[2026-01-09 09:59:08] -rw-r--r--. 2 boinc boinc 226333359 Jan  9 07:10 ATLAS.root_0
[2026-01-09 09:59:08] -rw-r--r--. 2 boinc boinc    592400 Jan  9 07:10 input.tar.gz
[2026-01-09 09:59:08] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:10 start_atlas.sh
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc 223035248 Jan  9 09:57 HITS.pool.root.1
[2026-01-09 09:59:08] -rw-------. 1 boinc boinc   1771520 Jan  9 09:59 result.tar.gz
09:59:09 (28902): run_atlas exited; CPU time 75045.670233
09:59:09 (28902): called boinc_finish(0)

</stderr_txt>
]]>

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