Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:48:31 (850691): wrapper (7.7.26015): starting
20:48:31 (850691): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 20:48:32] Arguments: --nthreads 9
[2026-01-08 20:48:32] Threads: 9
[2026-01-08 20:48:32] Checking for CVMFS
[2026-01-08 20:48:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:48:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:48:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:48:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:48:53] 2.13.3.0 7069 22902 253200 154926 0 299 39351524 40960000 13418 16776704 0 34039695 99.828 45613665 31308 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 20:48:53] CVMFS is ok
[2026-01-08 20:48:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:48:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:48:53] Further information can be found at the LHC@home message board.
[2026-01-08 20:48:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:48:53] Checking for apptainer binary...
[2026-01-08 20:48:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:48:53] Running /usr/bin/apptainer --version
[2026-01-08 20:48:53] apptainer version 1.4.5-2.el9
[2026-01-08 20:48:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:48:54] c-210-35-3.aglt2.org
[2026-01-08 20:48:54] apptainer works
[2026-01-08 20:48:54] Set ATHENA_PROC_NUMBER=9
[2026-01-08 20:48:54] Set ATHENA_CORE_NUMBER=9
[2026-01-08 20:48:54] Starting ATLAS job with PandaID=6963153354
[2026-01-08 20:48:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:48:49]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:48:49] 2026-01-09 10:47:56,316 | INFO     | time since job start (32295s) is within the limit (349056.0s)
[2026-01-09 05:48:49] 2026-01-09 10:47:57,441 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 05:48:49] 2026-01-09 10:47:57,449 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2806.9000000000005
[2026-01-09 05:48:49] 2026-01-09 10:47:57,503 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963153354/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:48:49] 2026-01-09 10:47:57,504 | INFO     | extracted standard info from prmon json
[2026-01-09 05:48:49] 2026-01-09 10:47:57,504 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:48:49] 2026-01-09 10:47:57,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:48:49] 2026-01-09 10:47:57,513 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:48:49] 2026-01-09 10:47:57,513 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:48:49] 2026-01-09 10:47:57,557 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:48:49] 2026-01-09 10:47:57,572 | INFO     | sum of square deviations: 45386669884.3263
[2026-01-09 05:48:49] 2026-01-09 10:47:57,617 | INFO     | sum of deviations: -60802598968.59578
[2026-01-09 05:48:49] 2026-01-09 10:47:57,617 | INFO     | mean x: 1767939514.0834916
[2026-01-09 05:48:49] 2026-01-09 10:47:57,617 | INFO     | mean y: 2560462.1499051233
[2026-01-09 05:48:49] 2026-01-09 10:47:57,617 | INFO     | intersect: 2370994135.50638
[2026-01-09 05:48:49] 2026-01-09 10:47:57,618 | INFO     | chi2: 3.335918421303176
[2026-01-09 05:48:49] 2026-01-09 10:47:57,644 | INFO     | sum of square deviations: 44107243710.0863
[2026-01-09 05:48:49] 2026-01-09 10:47:57,683 | INFO     | sum of deviations: 6200772899.080471
[2026-01-09 05:48:49] 2026-01-09 10:47:57,683 | INFO     | mean x: 1767939361.591954
[2026-01-09 05:48:49] 2026-01-09 10:47:57,683 | INFO     | mean y: 2568401.685823755
[2026-01-09 05:48:49] 2026-01-09 10:47:57,683 | INFO     | intersect: -245975591.51024455
[2026-01-09 05:48:49] 2026-01-09 10:47:57,684 | INFO     | chi2: 1.9593555323743495
[2026-01-09 05:48:49] 2026-01-09 10:47:57,684 | INFO     | current chi2=1.9593555323743495 (change=41.26488466079073 %)
[2026-01-09 05:48:49] 2026-01-09 10:47:57,721 | INFO     | sum of square deviations: 42852001536.356094
[2026-01-09 05:48:49] 2026-01-09 10:47:57,760 | INFO     | sum of deviations: 5676994817.587988
[2026-01-09 05:48:49] 2026-01-09 10:47:57,761 | INFO     | mean x: 1767939209.0947776
[2026-01-09 05:48:49] 2026-01-09 10:47:57,761 | INFO     | mean y: 2568338.0696324953
[2026-01-09 05:48:49] 2026-01-09 10:47:57,761 | INFO     | intersect: -231646666.3176542
[2026-01-09 05:48:49] 2026-01-09 10:47:57,761 | INFO     | chi2: 1.959213288193665
[2026-01-09 05:48:49] 2026-01-09 10:47:57,762 | INFO     | current chi2=1.959213288193665 (change=0.007259743233636306 %)
[2026-01-09 05:48:49] 2026-01-09 10:47:57,762 | INFO     | right removable region: 516
[2026-01-09 05:48:49] 2026-01-09 10:47:57,762 | INFO     | sum of square deviations: 44106927545.90059
[2026-01-09 05:48:49] 2026-01-09 10:47:57,842 | INFO     | sum of deviations: -155236264706.31027
[2026-01-09 05:48:49] 2026-01-09 10:47:57,842 | INFO     | mean x: 1767939666.5938697
[2026-01-09 05:48:49] 2026-01-09 10:47:57,843 | INFO     | mean y: 2571673.9655172415
[2026-01-09 05:48:49] 2026-01-09 10:47:57,843 | INFO     | intersect: 6224912819.413537
[2026-01-09 05:48:49] 2026-01-09 10:47:57,843 | INFO     | chi2: 1.7074224801713396
[2026-01-09 05:48:49] 2026-01-09 10:47:57,843 | INFO     | current chi2=1.7074224801713396 (change=48.81701934712374 %)
[2026-01-09 05:48:49] 2026-01-09 10:47:57,844 | INFO     | sum of square deviations: 42851496331.56672
[2026-01-09 05:48:49] 2026-01-09 10:47:57,943 | INFO     | sum of deviations: -150988975029.8162
[2026-01-09 05:48:49] 2026-01-09 10:47:57,943 | INFO     | mean x: 1767939819.1025145
[2026-01-09 05:48:49] 2026-01-09 10:47:57,943 | INFO     | mean y: 2571152.166344294
[2026-01-09 05:48:49] 2026-01-09 10:47:57,944 | INFO     | intersect: 6231978385.351931
[2026-01-09 05:48:49] 2026-01-09 10:47:57,944 | INFO     | chi2: 1.694523488848609
[2026-01-09 05:48:49] 2026-01-09 10:47:57,944 | INFO     | current chi2=1.694523488848609 (change=0.755465707669272 %)
[2026-01-09 05:48:49] 2026-01-09 10:47:57,944 | INFO     | left removable region: 20
[2026-01-09 05:48:49] 2026-01-09 10:47:57,945 | INFO     | sum of square deviations: 37839264423.21766
[2026-01-09 05:48:49] 2026-01-09 10:47:57,968 | INFO     | sum of deviations: -29936096455.072567
[2026-01-09 05:48:49] 2026-01-09 10:47:57,968 | INFO     | mean x: 1767939788.6169355
[2026-01-09 05:48:49] 2026-01-09 10:47:58,005 | INFO     | mean y: 2572337.794354839
[2026-01-09 05:48:49] 2026-01-09 10:47:58,005 | INFO     | intersect: 1401257456.163701
[2026-01-09 05:48:49] 2026-01-09 10:47:58,006 | INFO     | chi2: 0.1398625861498757
[2026-01-09 05:48:49] 2026-01-09 10:47:58,006 | INFO     | current memory leak: -0.79 B/s (using 496 data points, chi2=0.14)
[2026-01-09 05:48:49] 2026-01-09 10:47:58,007 | INFO     | could have reported an average CPU frequency of 2887 MHz (21 samples)
[2026-01-09 05:48:49] 2026-01-09 10:47:58,007 | INFO     | ..............................
[2026-01-09 05:48:49] 2026-01-09 10:47:58,007 | INFO     | . Timing measurements:
[2026-01-09 05:48:49] 2026-01-09 10:47:58,007 | INFO     | . get job = 0 s
[2026-01-09 05:48:49] 2026-01-09 10:47:58,007 | INFO     | . initial setup = 6 s
[2026-01-09 05:48:49] 2026-01-09 10:47:58,007 | INFO     | . payload setup = 27 s
[2026-01-09 05:48:49] 2026-01-09 10:47:58,008 | INFO     | . stage-in = 0 s
[2026-01-09 05:48:49] 2026-01-09 10:47:58,008 | INFO     | . payload execution = 32160 s
[2026-01-09 05:48:49] 2026-01-09 10:47:58,008 | INFO     | . stage-out = 5 s
[2026-01-09 05:48:49] 2026-01-09 10:47:58,008 | INFO     | . log creation = 0 s
[2026-01-09 05:48:49] 2026-01-09 10:47:58,008 | INFO     | ..............................
[2026-01-09 05:48:49] 2026-01-09 10:47:58,287 | INFO     | 
[2026-01-09 05:48:49] 2026-01-09 10:47:58,287 | INFO     | job summary report
[2026-01-09 05:48:49] 2026-01-09 10:47:58,287 | INFO     | --------------------------------------------------
[2026-01-09 05:48:49] 2026-01-09 10:47:58,287 | INFO     | PanDA job id: 6963153354
[2026-01-09 05:48:49] 2026-01-09 10:47:58,287 | INFO     | task id: 47898826
[2026-01-09 05:48:49] 2026-01-09 10:47:58,287 | INFO     | errors: (none)
[2026-01-09 05:48:49] 2026-01-09 10:47:58,287 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:48:49] 2026-01-09 10:47:58,287 | INFO     | pilot state: finished 
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | transexitcode: 0
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | exeerrorcode: 0
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | exeerrordiag: 
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | exitcode: 0
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | exitmsg: OK
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | cpuconsumptiontime: 57894 s
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | nevents: 400
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | neventsw: 0
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | pid: 864699
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | pgrp: 864699
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | corecount: 9
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | event service: False
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | sizes: {0: 2283744, 1: 2283828, 2: 2284027, 13: 2284027, 16: 2284345, 25: 2284373, 32192: 2322936, 32194: 2322935, 32200: 2332017, 32203: 2332073, 32252: 2332267}
[2026-01-09 05:48:49] 2026-01-09 10:47:58,288 | INFO     | --------------------------------------------------
[2026-01-09 05:48:49] 2026-01-09 10:47:58,289 | INFO     | 
[2026-01-09 05:48:49] 2026-01-09 10:47:58,289 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 05:48:49] 2026-01-09 10:47:58,337 | INFO     | time since job start (32297s) is within the limit (349056.0s)
[2026-01-09 05:48:49] 2026-01-09 10:47:58,401 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,401 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,401 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,401 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,401 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,401 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,401 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,402 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:48:49] 2026-01-09 10:47:58,403 | INFO     | job 6963153354 has completed (purged errors)
[2026-01-09 05:48:49] 2026-01-09 10:47:58,403 | INFO     | overall cleanup function is called
[2026-01-09 05:48:49] 2026-01-09 10:47:59,440 | INFO     | --- collectZombieJob: --- 10, [864699]
[2026-01-09 05:48:49] 2026-01-09 10:47:59,440 | INFO     | zombie collector waiting for pid 864699
[2026-01-09 05:48:49] 2026-01-09 10:47:59,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:48:49] 2026-01-09 10:47:59,440 | INFO     | collected zombie processes
[2026-01-09 05:48:49] 2026-01-09 10:47:59,440 | INFO     | will attempt to kill all subprocesses of pid=864699
[2026-01-09 05:48:49] 2026-01-09 10:48:02,261 | INFO     | process IDs to be killed: [864699] (in reverse order)
[2026-01-09 05:48:49] 2026-01-09 10:48:03,506 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:48:49] 2026-01-09 10:48:03,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:48:49] 2026-01-09 10:48:03,646 | INFO     | did not find any defunct processes belonging to 864699
[2026-01-09 05:48:49] 2026-01-09 10:48:03,799 | INFO     | did not find any defunct processes belonging to 864699
[2026-01-09 05:48:49] 2026-01-09 10:48:03,800 | INFO     | ready for new job
[2026-01-09 05:48:49] 2026-01-09 10:48:03,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:48:49] 2026-01-09 10:48:03,840 | INFO     | ***************************************
[2026-01-09 05:48:49] 2026-01-09 10:48:03,840 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:48:49] 2026-01-09 10:48:03,840 | INFO     | ***************************************
[2026-01-09 05:48:49] 2026-01-09 10:48:03,840 | INFO     | 
[2026-01-09 05:48:49] 2026-01-09 10:48:03,880 | INFO     | architecture information:
[2026-01-09 05:48:49] 2026-01-09 10:48:03,916 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:48:49] 2026-01-09 10:48:04,098 | INFO     | cat /etc/os-release:
[2026-01-09 05:48:49] NAME="CentOS Linux"
[2026-01-09 05:48:49] VERSION="7 (Core)"
[2026-01-09 05:48:49] ID="centos"
[2026-01-09 05:48:49] ID_LIKE="rhel fedora"
[2026-01-09 05:48:49] VERSION_ID="7"
[2026-01-09 05:48:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:48:49] ANSI_COLOR="0;31"
[2026-01-09 05:48:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:48:49] HOME_URL="https://www.centos.org/"
[2026-01-09 05:48:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:48:49] 
[2026-01-09 05:48:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:48:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:48:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:48:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:48:49] 
[2026-01-09 05:48:49] 2026-01-09 10:48:04,099 | INFO     | ***************************************
[2026-01-09 05:48:49] 2026-01-09 10:48:04,618 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 05:48:49] 2026-01-09 10:48:04,713 | INFO     | sufficient remaining disk space (74054631424 B)
[2026-01-09 05:48:49] 2026-01-09 10:48:04,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:48:49] 2026-01-09 10:48:04,714 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:48:49] 2026-01-09 10:48:04,714 | INFO     | update_server=False
[2026-01-09 05:48:49] 2026-01-09 10:48:04,714 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:48:49] 2026-01-09 10:48:04,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:48:49] 2026-01-09 10:48:04,714 | INFO     | aborting loop
[2026-01-09 05:48:49] 2026-01-09 10:48:04,873 | INFO     | all data control threads have been joined
[2026-01-09 05:48:49] 2026-01-09 10:48:05,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:48:49] 2026-01-09 10:48:05,597 | INFO     | all payload control threads have been joined
[2026-01-09 05:48:49] 2026-01-09 10:48:05,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:48:49] 2026-01-09 10:48:05,754 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:05,842 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:05,879 | INFO     | [data] control thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:06,074 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:06,324 | INFO     | all job control threads have been joined
[2026-01-09 05:48:49] 2026-01-09 10:48:06,332 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:06,387 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:06,602 | INFO     | [payload] control thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:06,997 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:07,024 | INFO     | [job] validate thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:07,029 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:07,035 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:07,157 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:07,336 | INFO     | [job] control thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:07,477 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:07,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:48:49] 2026-01-09 10:48:08,532 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:09,692 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:48:49] 2026-01-09 10:48:33,036 | INFO     | PID=854926 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 05:48:49] 2026-01-09 10:48:33,037 | INFO     | .. there are 17 such processes running
[2026-01-09 05:48:49] 2026-01-09 10:48:33,053 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:48:49] 2026-01-09 10:48:33,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:48:49] 2026-01-09 10:48:33,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:48:49] 2026-01-09 10:48:40,124 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:48:49] 2026-01-09 10:48:41,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321453537088)>', '<ExcThread(monitor, started 140320985564928)>']
[2026-01-09 05:48:49] 2026-01-09 10:48:42,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:48:49] 2026-01-09 10:48:42,153 | INFO     | [monitor] control thread has ended
[2026-01-09 05:48:49] 2026-01-09 10:48:46,520 | INFO     | all workflow threads have been joined
[2026-01-09 05:48:49] 2026-01-09 10:48:46,520 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:48:49] 2026-01-09 10:48:46,520 | INFO     | traces error code: 0
[2026-01-09 05:48:49] 2026-01-09 10:48:46,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:48:49] 2026-01-09 10:48:48,590 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:48:49] 2026-01-09 10:48:48,609 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:48:49] 2026-01-09 10:48:48,625 [wrapper] pilotpid: 854926
[2026-01-09 05:48:49] 2026-01-09 10:48:48,651 [wrapper] Pilot exit status: 0
[2026-01-09 05:48:49] 2026-01-09 10:48:48,851 [wrapper] pandaids: 6963153354
[2026-01-09 05:48:49] 2026-01-09 10:48:48,978 [wrapper] cleanup supervisor_pilot 2183921 854927
[2026-01-09 05:48:49] 2026-01-09 10:48:48,987 [wrapper] Test setup, not cleaning
[2026-01-09 05:48:49] 2026-01-09 10:48:49,017 [wrapper] apfmon messages muted
[2026-01-09 05:48:49] 2026-01-09 10:48:49,035 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:48:49] 2026-01-09 10:48:49,063 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:48:49]  *** Error codes and diagnostics ***
[2026-01-09 05:48:49]     "exeErrorCode": 0,
[2026-01-09 05:48:49]     "exeErrorDiag": "",
[2026-01-09 05:48:49]     "pilotErrorCode": 0,
[2026-01-09 05:48:49]     "pilotErrorDiag": "",
[2026-01-09 05:48:49]  *** Listing of results directory ***
[2026-01-09 05:48:49] total 445136
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 05:48:49] -rwx------. 1 boincer umatlas     36322 Jan  8 14:09 runpilot2-wrapper.sh
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:11 queuedata.json
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas       100 Jan  8 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:48:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 20:48 run_atlas
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas       105 Jan  8 20:48 job.xml
[2026-01-09 05:48:49] -rw-r--r--. 2 boincer umatlas 223081808 Jan  8 20:48 EVNT.47898824._001162.pool.root.1
[2026-01-09 05:48:49] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:48 start_atlas.sh
[2026-01-09 05:48:49] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 20:48 shared
[2026-01-09 05:48:49] -rw-r--r--. 2 boincer umatlas    592397 Jan  8 20:48 input.tar.gz
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas         0 Jan  8 20:48 boinc_lockfile
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas      2520 Jan  8 20:48 pandaJob.out
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas        57 Jan  8 20:48 setup.sh.local
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas    989821 Jan  8 20:49 agis_schedconf.cvmfs.json
[2026-01-09 05:48:49] drwx------. 5 boincer umatlas      4096 Jan  8 20:49 pilot3
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas 219831039 Jan  9 05:43 HITS.47898826._030027.pool.root.1
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas       531 Jan  9 05:44 boinc_task_state.xml
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas      1042 Jan  9 05:46 memory_monitor_summary.json
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas   1516240 Jan  9 05:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas    673912 Jan  9 05:47 log.47898826._030027.job.log.tgz.1
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas      6842 Jan  9 05:47 init_data.xml
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas      7830 Jan  9 05:47 heartbeat.json
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas        28 Jan  9 05:48 wrapper_checkpoint.txt
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 05:48 boinc_mmap_file
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas        95 Jan  9 05:48 pilot_heartbeat.json
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas      4823 Jan  9 05:48 pilotlog.txt
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas   3818439 Jan  9 05:48 log.47898826._030027.job.log.1
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas       357 Jan  9 05:48 output.list
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas       620 Jan  9 05:48 runtime_log
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas   4515840 Jan  9 05:48 result.tar.gz
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas      9353 Jan  9 05:48 runtime_log.err
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas       663 Jan  9 05:48 P6XKDmBZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8GlKDmUUFsnm.diag
[2026-01-09 05:48:49] -rw-r--r--. 1 boincer umatlas     21149 Jan  9 05:48 stderr.txt
[2026-01-09 05:48:49] HITS file was successfully produced:
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas 219831039 Jan  9 05:43 shared/HITS.pool.root.1
[2026-01-09 05:48:49]  *** Contents of shared directory: ***
[2026-01-09 05:48:49] total 437548
[2026-01-09 05:48:49] -rw-r--r--. 2 boincer umatlas 223081808 Jan  8 20:48 ATLAS.root_0
[2026-01-09 05:48:49] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:48 start_atlas.sh
[2026-01-09 05:48:49] -rw-r--r--. 2 boincer umatlas    592397 Jan  8 20:48 input.tar.gz
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas 219831039 Jan  9 05:43 HITS.pool.root.1
[2026-01-09 05:48:49] -rw-------. 1 boincer umatlas   4515840 Jan  9 05:48 result.tar.gz
05:48:51 (850691): run_atlas exited; CPU time 58701.270895
05:48:51 (850691): called boinc_finish(0)

</stderr_txt>
]]>

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