Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:44:04 (2288585): wrapper (7.7.26015): starting
14:44:04 (2288585): wrapper: running run_atlas (--nthreads 6)
[2026-01-09 14:44:04] Arguments: --nthreads 6
[2026-01-09 14:44:04] Threads: 6
[2026-01-09 14:44:04] Checking for CVMFS
[2026-01-09 14:44:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:44:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:44:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:44:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:44:05] 2.13.3.0 2288015 1 31072 154933 3 4 11898323 20971521 19 130560 0 754 99.737 2315 83 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-09 14:44:05] CVMFS is ok
[2026-01-09 14:44:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:44:05] Checking for apptainer binary...
[2026-01-09 14:44:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:44:05] Running /usr/bin/apptainer --version
[2026-01-09 14:44:05] apptainer version 1.4.4-1.el9
[2026-01-09 14:44:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:44:05] testio006
[2026-01-09 14:44:05] apptainer works
[2026-01-09 14:44:05] Set ATHENA_PROC_NUMBER=6
[2026-01-09 14:44:05] Set ATHENA_CORE_NUMBER=6
[2026-01-09 14:44:05] Starting ATLAS job with PandaID=6963153273
[2026-01-09 14:44:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:03:55]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:03:55] 2026-01-09 08:02:49,067 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3994.6209375000003
[2026-01-09 17:03:55] 2026-01-09 08:02:49,069 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6963153273/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,070 | INFO     | extracted standard info from prmon json
[2026-01-09 17:03:55] 2026-01-09 08:02:49,070 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:03:55] 2026-01-09 08:02:49,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:03:55] 2026-01-09 08:02:49,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 17:03:55] 2026-01-09 08:02:49,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 17:03:55] 2026-01-09 08:02:49,072 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:03:55] 2026-01-09 08:02:49,072 | INFO     | sum of square deviations: 762888239.7333311
[2026-01-09 17:03:55] 2026-01-09 08:02:49,072 | INFO     | sum of deviations: 17855520456.822227
[2026-01-09 17:03:55] 2026-01-09 08:02:49,073 | INFO     | mean x: 1767941647.0444446
[2026-01-09 17:03:55] 2026-01-09 08:02:49,073 | INFO     | sufficient remaining disk space (93471113216 B)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,073 | INFO     | mean y: 2437384.362962963
[2026-01-09 17:03:55] 2026-01-09 08:02:49,073 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,073 | INFO     | intersect: -41376517751.063614
[2026-01-09 17:03:55] 2026-01-09 08:02:49,073 | INFO     | chi2: 2.2330646184549217
[2026-01-09 17:03:55] 2026-01-09 08:02:49,073 | INFO     | sum of square deviations: 681223422.2230749
[2026-01-09 17:03:55] 2026-01-09 08:02:49,074 | INFO     | sum of deviations: 17002274796.176933
[2026-01-09 17:03:55] 2026-01-09 08:02:49,074 | INFO     | mean x: 1767941494.5461538
[2026-01-09 17:03:55] 2026-01-09 08:02:49,074 | INFO     | mean y: 2435791.053846154
[2026-01-09 17:03:55] 2026-01-09 08:02:49,074 | INFO     | intersect: -44122628223.54525
[2026-01-09 17:03:55] 2026-01-09 08:02:49,074 | INFO     | chi2: 2.2371035607415757
[2026-01-09 17:03:55] 2026-01-09 08:02:49,074 | INFO     | current chi2=2.2371035607415757 (change=-0.18086992437543548 %)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,074 | INFO     | right removable region: 129
[2026-01-09 17:03:55] 2026-01-09 08:02:49,074 | INFO     | sum of square deviations: 681219762.2230749
[2026-01-09 17:03:55] 2026-01-09 08:02:49,075 | INFO     | sum of deviations: -11284346283.069231
[2026-01-09 17:03:55] 2026-01-09 08:02:49,075 | INFO     | mean x: 1767941799.5461538
[2026-01-09 17:03:55] 2026-01-09 08:02:49,075 | INFO     | mean y: 2491368.7615384613
[2026-01-09 17:03:55] 2026-01-09 08:02:49,075 | INFO     | intersect: 29288293955.120506
[2026-01-09 17:03:55] 2026-01-09 08:02:49,075 | INFO     | chi2: 0.06753658094029916
[2026-01-09 17:03:55] 2026-01-09 08:02:49,075 | INFO     | current chi2=0.06753658094029916 (change=96.97561009286744 %)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,075 | INFO     | sum of square deviations: 605597909.7120006
[2026-01-09 17:03:55] 2026-01-09 08:02:49,076 | INFO     | sum of deviations: -10334262165.216
[2026-01-09 17:03:55] 2026-01-09 08:02:49,076 | INFO     | mean x: 1767941952.048
[2026-01-09 17:03:55] 2026-01-09 08:02:49,076 | INFO     | mean y: 2489386.536
[2026-01-09 17:03:55] 2026-01-09 08:02:49,076 | INFO     | intersect: 30171641776.834812
[2026-01-09 17:03:55] 2026-01-09 08:02:49,076 | INFO     | chi2: 0.06066960435827955
[2026-01-09 17:03:55] 2026-01-09 08:02:49,076 | INFO     | current chi2=0.06066960435827955 (change=10.167788310293448 %)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,076 | INFO     | left removable region: 20
[2026-01-09 17:03:55] 2026-01-09 08:02:49,077 | INFO     | sum of square deviations: 401536805.6697241
[2026-01-09 17:03:55] 2026-01-09 08:02:49,077 | INFO     | sum of deviations: -4944101305.275227
[2026-01-09 17:03:55] 2026-01-09 08:02:49,077 | INFO     | mean x: 1767942074.0550458
[2026-01-09 17:03:55] 2026-01-09 08:02:49,077 | INFO     | mean y: 2477148.0458715595
[2026-01-09 17:03:55] 2026-01-09 08:02:49,077 | INFO     | intersect: 21771053758.121758
[2026-01-09 17:03:55] 2026-01-09 08:02:49,077 | INFO     | chi2: 0.0451316725869468
[2026-01-09 17:03:55] 2026-01-09 08:02:49,077 | INFO     | current memory leak: -12.31 B/s (using 109 data points, chi2=0.05)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | could have reported an average CPU frequency of 3977 MHz (8 samples)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | ..............................
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | . Timing measurements:
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | . get job = 0 s
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | size of work directory /var/lib/boinc/slots/3/PanDA_Pilot-6963153273: 3482381 B (within 4404019200 B limit)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | . initial setup = 5 s
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | . payload setup = 6 s
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | pfn file=/var/lib/boinc/slots/3/PanDA_Pilot-6963153273/HITS.47898826._029968.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | . stage-in = 0 s
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | total size of present files: 0 B (workdir size: 3482381 B)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | . payload execution = 8205 s
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/3/PanDA_Pilot-6963153273/HITS.47898826._029968.pool.root.1 since it does not exist
[2026-01-09 17:03:55] 2026-01-09 08:02:49,078 | INFO     | . stage-out = 0 s
[2026-01-09 17:03:55] 2026-01-09 08:02:49,079 | INFO     | . log creation = 0 s
[2026-01-09 17:03:55] 2026-01-09 08:02:49,079 | INFO     | ..............................
[2026-01-09 17:03:55] 2026-01-09 08:02:49,129 | INFO     | 
[2026-01-09 17:03:55] 2026-01-09 08:02:49,129 | INFO     | job summary report
[2026-01-09 17:03:55] 2026-01-09 08:02:49,129 | INFO     | --------------------------------------------------
[2026-01-09 17:03:55] 2026-01-09 08:02:49,129 | INFO     | PanDA job id: 6963153273
[2026-01-09 17:03:55] 2026-01-09 08:02:49,129 | INFO     | task id: 47898826
[2026-01-09 17:03:55] 2026-01-09 08:02:49,129 | INFO     | errors: (none)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,129 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:03:55] 2026-01-09 08:02:49,129 | INFO     | pilot state: finished 
[2026-01-09 17:03:55] 2026-01-09 08:02:49,129 | INFO     | transexitcode: 0
[2026-01-09 17:03:55] 2026-01-09 08:02:49,129 | INFO     | exeerrorcode: 0
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | exeerrordiag: 
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | exitcode: 0
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | exitmsg: OK
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | cpuconsumptiontime: 46303 s
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | nevents: 400
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | neventsw: 0
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | pid: 2309362
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | pgrp: 2309362
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | corecount: 6
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | event service: False
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | sizes: {0: 2283971, 3: 2284233, 11: 2284261, 8215: 2312054, 8216: 2321107, 8219: 2321273}
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | --------------------------------------------------
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | 
[2026-01-09 17:03:55] 2026-01-09 08:02:49,130 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-09 17:03:55] 2026-01-09 08:02:49,142 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,144 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,144 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,144 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:03:55] 2026-01-09 08:02:49,144 | INFO     | job 6963153273 has completed (purged errors)
[2026-01-09 17:03:55] 2026-01-09 08:02:49,144 | INFO     | overall cleanup function is called
[2026-01-09 17:03:55] 2026-01-09 08:02:49,198 | INFO     | number of running child processes to parent process 2309362: 1
[2026-01-09 17:03:55] 2026-01-09 08:02:49,198 | INFO     | maximum number of monitored processes: 6
[2026-01-09 17:03:55] 2026-01-09 08:02:49,198 | INFO     | aborting job monitoring since job object (job id=6963153273) has expired
[2026-01-09 17:03:55] 2026-01-09 08:02:50,151 | INFO     | --- collectZombieJob: --- 10, [2309362]
[2026-01-09 17:03:55] 2026-01-09 08:02:50,151 | INFO     | zombie collector waiting for pid 2309362
[2026-01-09 17:03:55] 2026-01-09 08:02:50,151 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:03:55] 2026-01-09 08:02:50,151 | INFO     | collected zombie processes
[2026-01-09 17:03:55] 2026-01-09 08:02:50,151 | INFO     | will attempt to kill all subprocesses of pid=2309362
[2026-01-09 17:03:55] 2026-01-09 08:02:50,214 | INFO     | process IDs to be killed: [2309362] (in reverse order)
[2026-01-09 17:03:55] 2026-01-09 08:02:50,245 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:03:55] 2026-01-09 08:02:50,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:03:55] 2026-01-09 08:02:50,247 | INFO     | did not find any defunct processes belonging to 2309362
[2026-01-09 17:03:55] 2026-01-09 08:02:50,249 | INFO     | did not find any defunct processes belonging to 2309362
[2026-01-09 17:03:55] 2026-01-09 08:02:50,249 | INFO     | ready for new job
[2026-01-09 17:03:55] 2026-01-09 08:02:50,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:03:55] 2026-01-09 08:02:50,250 | INFO     | ***************************************
[2026-01-09 17:03:55] 2026-01-09 08:02:50,251 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:03:55] 2026-01-09 08:02:50,251 | INFO     | ***************************************
[2026-01-09 17:03:55] 2026-01-09 08:02:50,251 | INFO     | 
[2026-01-09 17:03:55] 2026-01-09 08:02:50,251 | INFO     | architecture information:
[2026-01-09 17:03:55] 2026-01-09 08:02:50,251 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:03:55] 2026-01-09 08:02:50,261 | INFO     | cat /etc/os-release:
[2026-01-09 17:03:55] NAME="CentOS Linux"
[2026-01-09 17:03:55] VERSION="7 (Core)"
[2026-01-09 17:03:55] ID="centos"
[2026-01-09 17:03:55] ID_LIKE="rhel fedora"
[2026-01-09 17:03:55] VERSION_ID="7"
[2026-01-09 17:03:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:03:55] ANSI_COLOR="0;31"
[2026-01-09 17:03:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:03:55] HOME_URL="https://www.centos.org/"
[2026-01-09 17:03:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:03:55] 
[2026-01-09 17:03:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:03:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:03:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:03:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:03:55] 
[2026-01-09 17:03:55] 2026-01-09 08:02:50,261 | INFO     | ***************************************
[2026-01-09 17:03:55] 2026-01-09 08:02:50,764 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-09 17:03:55] 2026-01-09 08:02:50,774 | INFO     | sufficient remaining disk space (93476356096 B)
[2026-01-09 17:03:55] 2026-01-09 08:02:50,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:03:55] 2026-01-09 08:02:50,774 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:03:55] 2026-01-09 08:02:50,774 | INFO     | update_server=False
[2026-01-09 17:03:55] 2026-01-09 08:02:50,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:03:55] 2026-01-09 08:02:50,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:03:55] 2026-01-09 08:02:50,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:03:55] 2026-01-09 08:02:50,774 | INFO     | aborting loop
[2026-01-09 17:03:55] 2026-01-09 08:02:51,000 | INFO     | all payload control threads have been joined
[2026-01-09 17:03:55] 2026-01-09 08:02:51,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:03:55] 2026-01-09 08:02:51,671 | INFO     | all data control threads have been joined
[2026-01-09 17:03:55] 2026-01-09 08:02:51,679 | INFO     | all job control threads have been joined
[2026-01-09 17:03:55] 2026-01-09 08:02:51,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:03:55] 2026-01-09 08:02:51,776 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:51,779 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:51,779 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:52,005 | INFO     | [payload] control thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:52,457 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:52,532 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:52,649 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:52,676 | INFO     | [data] control thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:52,684 | INFO     | [job] control thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:52,704 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:52,731 | INFO     | [job] validate thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:53,137 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:53,217 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:53,232 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:02:55,774 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:03:01,020 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:03:55] 2026-01-09 08:03:02,025 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:03:55] 2026-01-09 08:03:21,839 | INFO     | PID=2295942 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 17:03:55] 2026-01-09 08:03:21,839 | INFO     | .. there are 2 such processes running
[2026-01-09 17:03:55] 2026-01-09 08:03:21,839 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:03:55] 2026-01-09 08:03:21,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:03:55] 2026-01-09 08:03:21,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:03:55] 2026-01-09 08:03:49,546 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:03:55] 2026-01-09 08:03:50,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310488938304)>', '<ExcThread(monitor, started 140310113928960)>']
[2026-01-09 17:03:55] 2026-01-09 08:03:50,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:03:55] 2026-01-09 08:03:50,916 | INFO     | [monitor] control thread has ended
[2026-01-09 17:03:55] 2026-01-09 08:03:55,682 | INFO     | all workflow threads have been joined
[2026-01-09 17:03:55] 2026-01-09 08:03:55,682 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:03:55] 2026-01-09 08:03:55,682 | INFO     | traces error code: 0
[2026-01-09 17:03:55] 2026-01-09 08:03:55,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:03:55] 2026-01-09 08:03:55,750 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:03:55] 2026-01-09 08:03:55,752 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:03:55] 2026-01-09 08:03:55,753 [wrapper] pilotpid: 2295942
[2026-01-09 17:03:55] 2026-01-09 08:03:55,754 [wrapper] Pilot exit status: 0
[2026-01-09 17:03:55] 2026-01-09 08:03:55,760 [wrapper] pandaids: 6963153273
[2026-01-09 17:03:55] 2026-01-09 08:03:55,781 [wrapper] cleanup supervisor_pilot 2344247 2295944
[2026-01-09 17:03:55] 2026-01-09 08:03:55,783 [wrapper] Test setup, not cleaning
[2026-01-09 17:03:55] 2026-01-09 08:03:55,784 [wrapper] apfmon messages muted
[2026-01-09 17:03:55] 2026-01-09 08:03:55,786 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:03:55] 2026-01-09 08:03:55,787 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:03:55]  *** Error codes and diagnostics ***
[2026-01-09 17:03:55]     "exeErrorCode": 0,
[2026-01-09 17:03:55]     "exeErrorDiag": "",
[2026-01-09 17:03:55]     "pilotErrorCode": 0,
[2026-01-09 17:03:55]     "pilotErrorDiag": "",
[2026-01-09 17:03:55]  *** Listing of results directory ***
[2026-01-09 17:03:55] total 443112
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc    579449 Jan  9 04:06 pilot3.tar.gz
[2026-01-09 17:03:55] -rwx------. 1 boinc boinc     36322 Jan  9 04:09 runpilot2-wrapper.sh
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc      5112 Jan  9 04:11 queuedata.json
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc       100 Jan  9 14:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:03:55] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 14:44 run_atlas
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc       105 Jan  9 14:44 job.xml
[2026-01-09 17:03:55] -rw-r--r--. 2 boinc boinc 222919302 Jan  9 14:44 EVNT.47898824._001159.pool.root.1
[2026-01-09 17:03:55] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:44 start_atlas.sh
[2026-01-09 17:03:55] drwxrwx--x. 2 boinc boinc        68 Jan  9 14:44 shared
[2026-01-09 17:03:55] -rw-r--r--. 2 boinc boinc    592401 Jan  9 14:44 input.tar.gz
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc         0 Jan  9 14:44 boinc_lockfile
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc      2520 Jan  9 14:44 pandaJob.out
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc    989771 Jan  9 14:45 agis_schedconf.cvmfs.json
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc   1516240 Jan  9 14:45 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:03:55] drwx------. 5 boinc boinc      4096 Jan  9 14:45 pilot3
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc      9362 Jan  9 15:08 init_data.xml
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc 223866783 Jan  9 17:02 HITS.47898826._029968.pool.root.1
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc      1018 Jan  9 17:02 memory_monitor_summary.json
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc    353904 Jan  9 17:02 log.47898826._029968.job.log.tgz.1
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc       529 Jan  9 17:02 boinc_task_state.xml
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc      7751 Jan  9 17:02 heartbeat.json
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc        95 Jan  9 17:03 pilot_heartbeat.json
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc        27 Jan  9 17:03 wrapper_checkpoint.txt
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc      8192 Jan  9 17:03 boinc_mmap_file
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc      4895 Jan  9 17:03 pilotlog.txt
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc   1175435 Jan  9 17:03 log.47898826._029968.job.log.1
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc       357 Jan  9 17:03 output.list
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc       620 Jan  9 17:03 runtime_log
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc   1546240 Jan  9 17:03 result.tar.gz
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc       644 Jan  9 17:03 TlAODmAZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjGlKDmO2s14n.diag
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc      8775 Jan  9 17:03 runtime_log.err
[2026-01-09 17:03:55] -rw-r--r--. 1 boinc boinc     21218 Jan  9 17:03 stderr.txt
[2026-01-09 17:03:55] HITS file was successfully produced:
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc 223866783 Jan  9 17:02 shared/HITS.pool.root.1
[2026-01-09 17:03:55]  *** Contents of shared directory: ***
[2026-01-09 17:03:55] total 438428
[2026-01-09 17:03:55] -rw-r--r--. 2 boinc boinc 222919302 Jan  9 14:44 ATLAS.root_0
[2026-01-09 17:03:55] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:44 start_atlas.sh
[2026-01-09 17:03:55] -rw-r--r--. 2 boinc boinc    592401 Jan  9 14:44 input.tar.gz
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc 223866783 Jan  9 17:02 HITS.pool.root.1
[2026-01-09 17:03:55] -rw-------. 1 boinc boinc   1546240 Jan  9 17:03 result.tar.gz
17:03:57 (2288585): run_atlas exited; CPU time 46375.101987
17:03:57 (2288585): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN