Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:19:32 (12610): wrapper (7.7.26015): starting
07:19:32 (12610): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:19:32] Arguments: --nthreads 8
[2026-01-09 07:19:32] Threads: 8
[2026-01-09 07:19:32] Checking for CVMFS
[2026-01-09 07:19:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:19:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:19:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:19:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:19:33] 2.11.2.0 32209 35029 117696 154934 0 56 20169975 25165825 0 130560 0 16946252 99.824 9839963 4079 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 07:19:33] CVMFS is ok
[2026-01-09 07:19:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:19:33] Checking for apptainer binary...
[2026-01-09 07:19:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:19:33] Running /usr/bin/apptainer --version
[2026-01-09 07:19:33] apptainer version 1.3.2-1.el7
[2026-01-09 07:19:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:19:34] cg-vwn500.simple-grid.lan
[2026-01-09 07:19:34] apptainer works
[2026-01-09 07:19:34] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:19:34] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:19:34] Starting ATLAS job with PandaID=6963153495
[2026-01-09 07:19:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:59:12]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:59:12] 2026-01-09 08:58:25,492 | INFO     | time since job start (9515s) is within the limit (349056.0s)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,091 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 09:59:12] 2026-01-09 08:58:26,092 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 09:59:12] 2026-01-09 08:58:26,094 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963153495/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,095 | INFO     | extracted standard info from prmon json
[2026-01-09 09:59:12] 2026-01-09 08:58:26,095 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:59:12] 2026-01-09 08:58:26,095 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:59:12] 2026-01-09 08:58:26,095 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:59:12] 2026-01-09 08:58:26,095 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:59:12] 2026-01-09 08:58:26,099 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:59:12] 2026-01-09 08:58:26,099 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,100 | INFO     | sum of deviations: -17337730246.0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,101 | INFO     | mean x: 1767944351.5
[2026-01-09 09:59:12] 2026-01-09 08:58:26,101 | INFO     | mean y: 2533396.6794871795
[2026-01-09 09:59:12] 2026-01-09 08:58:26,101 | INFO     | intersect: 26041662780.44667
[2026-01-09 09:59:12] 2026-01-09 08:58:26,101 | INFO     | chi2: 2.4841187772466524
[2026-01-09 09:59:12] 2026-01-09 08:58:26,102 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,103 | INFO     | sum of deviations: -6169285568.99999
[2026-01-09 09:59:12] 2026-01-09 08:58:26,103 | INFO     | mean x: 1767944199.0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,103 | INFO     | mean y: 2548564.258278146
[2026-01-09 09:59:12] 2026-01-09 08:58:26,103 | INFO     | intersect: 10219308970.386288
[2026-01-09 09:59:12] 2026-01-09 08:58:26,103 | INFO     | chi2: 1.7254620360112634
[2026-01-09 09:59:12] 2026-01-09 08:58:26,103 | INFO     | current chi2=1.7254620360112634 (change=30.54027642254164 %)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,104 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 09:59:12] 2026-01-09 08:58:26,105 | INFO     | sum of deviations: -5508323515.499992
[2026-01-09 09:59:12] 2026-01-09 08:58:26,105 | INFO     | mean x: 1767944046.5
[2026-01-09 09:59:12] 2026-01-09 08:58:26,105 | INFO     | mean y: 2549547.2534246575
[2026-01-09 09:59:12] 2026-01-09 08:58:26,105 | INFO     | intersect: 10094412369.816946
[2026-01-09 09:59:12] 2026-01-09 08:58:26,105 | INFO     | chi2: 1.7257077339751683
[2026-01-09 09:59:12] 2026-01-09 08:58:26,106 | INFO     | current chi2=1.7257077339751683 (change=-0.014239546207166809 %)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,106 | INFO     | right removable region: 145
[2026-01-09 09:59:12] 2026-01-09 08:58:26,106 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,107 | INFO     | sum of deviations: -41561087117.0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,107 | INFO     | mean x: 1767944504.0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,107 | INFO     | mean y: 2566607.158940397
[2026-01-09 09:59:12] 2026-01-09 08:58:26,107 | INFO     | intersect: 68830591797.02539
[2026-01-09 09:59:12] 2026-01-09 08:58:26,108 | INFO     | chi2: 0.9640965066908123
[2026-01-09 09:59:12] 2026-01-09 08:58:26,108 | INFO     | current chi2=0.9640965066908123 (change=61.18959707074081 %)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,108 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 09:59:12] 2026-01-09 08:58:26,109 | INFO     | sum of deviations: -41443284435.5
[2026-01-09 09:59:12] 2026-01-09 08:58:26,109 | INFO     | mean x: 1767944656.5
[2026-01-09 09:59:12] 2026-01-09 08:58:26,109 | INFO     | mean y: 2566349.787671233
[2026-01-09 09:59:12] 2026-01-09 08:58:26,110 | INFO     | intersect: 75931310289.65651
[2026-01-09 09:59:12] 2026-01-09 08:58:26,110 | INFO     | chi2: 0.9379302870423429
[2026-01-09 09:59:12] 2026-01-09 08:58:26,110 | INFO     | current chi2=0.9379302870423429 (change=2.7140664307853246 %)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,110 | INFO     | left removable region: 20
[2026-01-09 09:59:12] 2026-01-09 08:58:26,110 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,111 | INFO     | sum of deviations: -21172457669.999996
[2026-01-09 09:59:12] 2026-01-09 08:58:26,111 | INFO     | mean x: 1767944626.0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,111 | INFO     | mean y: 2572143.728
[2026-01-09 09:59:12] 2026-01-09 08:58:26,112 | INFO     | intersect: 61812646251.92855
[2026-01-09 09:59:12] 2026-01-09 08:58:26,112 | INFO     | chi2: 0.13319239923642426
[2026-01-09 09:59:12] 2026-01-09 08:58:26,112 | INFO     | current memory leak: -34.96 B/s (using 125 data points, chi2=0.13)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,112 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,113 | INFO     | ..............................
[2026-01-09 09:59:12] 2026-01-09 08:58:26,113 | INFO     | . Timing measurements:
[2026-01-09 09:59:12] 2026-01-09 08:58:26,113 | INFO     | . get job = 0 s
[2026-01-09 09:59:12] 2026-01-09 08:58:26,113 | INFO     | . initial setup = 1 s
[2026-01-09 09:59:12] 2026-01-09 08:58:26,113 | INFO     | . payload setup = 7 s
[2026-01-09 09:59:12] 2026-01-09 08:58:26,113 | INFO     | . stage-in = 0 s
[2026-01-09 09:59:12] 2026-01-09 08:58:26,113 | INFO     | . payload execution = 9474 s
[2026-01-09 09:59:12] 2026-01-09 08:58:26,114 | INFO     | . stage-out = 1 s
[2026-01-09 09:59:12] 2026-01-09 08:58:26,114 | INFO     | . log creation = 0 s
[2026-01-09 09:59:12] 2026-01-09 08:58:26,114 | INFO     | ..............................
[2026-01-09 09:59:12] 2026-01-09 08:58:26,358 | INFO     | 
[2026-01-09 09:59:12] 2026-01-09 08:58:26,359 | INFO     | job summary report
[2026-01-09 09:59:12] 2026-01-09 08:58:26,359 | INFO     | --------------------------------------------------
[2026-01-09 09:59:12] 2026-01-09 08:58:26,359 | INFO     | PanDA job id: 6963153495
[2026-01-09 09:59:12] 2026-01-09 08:58:26,359 | INFO     | task id: 47898826
[2026-01-09 09:59:12] 2026-01-09 08:58:26,359 | INFO     | errors: (none)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,359 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:59:12] 2026-01-09 08:58:26,359 | INFO     | pilot state: finished 
[2026-01-09 09:59:12] 2026-01-09 08:58:26,359 | INFO     | transexitcode: 0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,360 | INFO     | exeerrorcode: 0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,360 | INFO     | exeerrordiag: 
[2026-01-09 09:59:12] 2026-01-09 08:58:26,360 | INFO     | exitcode: 0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,360 | INFO     | exitmsg: OK
[2026-01-09 09:59:12] 2026-01-09 08:58:26,360 | INFO     | cpuconsumptiontime: 71257 s
[2026-01-09 09:59:12] 2026-01-09 08:58:26,360 | INFO     | nevents: 400
[2026-01-09 09:59:12] 2026-01-09 08:58:26,360 | INFO     | neventsw: 0
[2026-01-09 09:59:12] 2026-01-09 08:58:26,360 | INFO     | pid: 22785
[2026-01-09 09:59:12] 2026-01-09 08:58:26,360 | INFO     | pgrp: 22785
[2026-01-09 09:59:12] 2026-01-09 08:58:26,360 | INFO     | corecount: 8
[2026-01-09 09:59:12] 2026-01-09 08:58:26,361 | INFO     | event service: False
[2026-01-09 09:59:12] 2026-01-09 08:58:26,361 | INFO     | sizes: {0: 2283971, 6: 2284233, 11: 2284261, 9486: 2312412, 9487: 2321410, 9489: 2321466, 9499: 2321788}
[2026-01-09 09:59:12] 2026-01-09 08:58:26,361 | INFO     | --------------------------------------------------
[2026-01-09 09:59:12] 2026-01-09 08:58:26,361 | INFO     | 
[2026-01-09 09:59:12] 2026-01-09 08:58:26,361 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 09:59:12] 2026-01-09 08:58:26,420 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,420 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,420 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,420 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,421 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,421 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,421 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,421 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,422 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,422 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,422 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,422 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:59:12] 2026-01-09 08:58:26,422 | INFO     | job 6963153495 has completed (purged errors)
[2026-01-09 09:59:12] 2026-01-09 08:58:26,423 | INFO     | overall cleanup function is called
[2026-01-09 09:59:12] 2026-01-09 08:58:27,430 | INFO     | --- collectZombieJob: --- 10, [22785]
[2026-01-09 09:59:12] 2026-01-09 08:58:27,430 | INFO     | zombie collector waiting for pid 22785
[2026-01-09 09:59:12] 2026-01-09 08:58:27,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:59:12] 2026-01-09 08:58:27,431 | INFO     | collected zombie processes
[2026-01-09 09:59:12] 2026-01-09 08:58:27,431 | INFO     | will attempt to kill all subprocesses of pid=22785
[2026-01-09 09:59:12] 2026-01-09 08:58:27,486 | INFO     | process IDs to be killed: [22785] (in reverse order)
[2026-01-09 09:59:12] 2026-01-09 08:58:27,547 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:59:12] 2026-01-09 08:58:27,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:59:12] 2026-01-09 08:58:27,549 | INFO     | did not find any defunct processes belonging to 22785
[2026-01-09 09:59:12] 2026-01-09 08:58:27,551 | INFO     | did not find any defunct processes belonging to 22785
[2026-01-09 09:59:12] 2026-01-09 08:58:27,551 | INFO     | ready for new job
[2026-01-09 09:59:12] 2026-01-09 08:58:27,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:59:12] 2026-01-09 08:58:27,553 | INFO     | ***************************************
[2026-01-09 09:59:12] 2026-01-09 08:58:27,554 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:59:12] 2026-01-09 08:58:27,554 | INFO     | ***************************************
[2026-01-09 09:59:12] 2026-01-09 08:58:27,554 | INFO     | 
[2026-01-09 09:59:12] 2026-01-09 08:58:27,554 | INFO     | pilot is running in a VM
[2026-01-09 09:59:12] 2026-01-09 08:58:27,555 | INFO     | architecture information:
[2026-01-09 09:59:12] 2026-01-09 08:58:27,556 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:59:12] 2026-01-09 08:58:27,573 | INFO     | cat /etc/os-release:
[2026-01-09 09:59:12] NAME="CentOS Linux"
[2026-01-09 09:59:12] VERSION="7 (Core)"
[2026-01-09 09:59:12] ID="centos"
[2026-01-09 09:59:12] ID_LIKE="rhel fedora"
[2026-01-09 09:59:12] VERSION_ID="7"
[2026-01-09 09:59:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:59:12] ANSI_COLOR="0;31"
[2026-01-09 09:59:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:59:12] HOME_URL="https://www.centos.org/"
[2026-01-09 09:59:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:59:12] 
[2026-01-09 09:59:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:59:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:59:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:59:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:59:12] 
[2026-01-09 09:59:12] 2026-01-09 08:58:27,573 | INFO     | ***************************************
[2026-01-09 09:59:12] 2026-01-09 08:58:28,077 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 09:59:12] 2026-01-09 08:58:28,102 | INFO     | sufficient remaining disk space (498321063936 B)
[2026-01-09 09:59:12] 2026-01-09 08:58:28,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:59:12] 2026-01-09 08:58:28,103 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:59:12] 2026-01-09 08:58:28,103 | INFO     | update_server=False
[2026-01-09 09:59:12] 2026-01-09 08:58:28,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:59:12] 2026-01-09 08:58:28,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:59:12] 2026-01-09 08:58:28,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:59:12] 2026-01-09 08:58:28,104 | INFO     | aborting loop
[2026-01-09 09:59:12] 2026-01-09 08:58:28,255 | INFO     | all data control threads have been joined
[2026-01-09 09:59:12] 2026-01-09 08:58:28,290 | INFO     | all payload control threads have been joined
[2026-01-09 09:59:12] 2026-01-09 08:58:29,108 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:29,109 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:29,110 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:29,261 | INFO     | [data] control thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:29,296 | INFO     | [payload] control thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:29,360 | INFO     | all job control threads have been joined
[2026-01-09 09:59:12] 2026-01-09 08:58:29,433 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:29,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:59:12] 2026-01-09 08:58:29,647 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:29,847 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:29,915 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:30,299 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:30,366 | INFO     | [job] control thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:30,507 | INFO     | [job] validate thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:30,518 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:30,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:59:12] 2026-01-09 08:58:31,518 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:35,000 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:38,631 | INFO     | job.realtimelogging is not enabled
[2026-01-09 09:59:12] 2026-01-09 08:58:39,636 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:59:12] 2026-01-09 08:58:58,588 | INFO     | PID=16349 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:59:12] 2026-01-09 08:58:58,589 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:59:12] 2026-01-09 08:58:58,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:59:12] 2026-01-09 08:58:58,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:59:12] 2026-01-09 08:59:05,450 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:59:12] 2026-01-09 08:59:06,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337753552704)>', '<ExcThread(monitor, started 140337167193856)>']
[2026-01-09 09:59:12] 2026-01-09 08:59:07,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:59:12] 2026-01-09 08:59:07,636 | INFO     | [monitor] control thread has ended
[2026-01-09 09:59:12] 2026-01-09 08:59:11,823 | INFO     | all workflow threads have been joined
[2026-01-09 09:59:12] 2026-01-09 08:59:11,823 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:59:12] 2026-01-09 08:59:11,823 | INFO     | traces error code: 0
[2026-01-09 09:59:12] 2026-01-09 08:59:11,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:59:12] 2026-01-09 08:59:11,974 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:59:12] 2026-01-09 08:59:11,981 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:59:12] 2026-01-09 08:59:11,990 [wrapper] pilotpid: 16349
[2026-01-09 09:59:12] 2026-01-09 08:59:11,999 [wrapper] Pilot exit status: 0
[2026-01-09 09:59:12] 2026-01-09 08:59:12,043 [wrapper] pandaids: 6963153495
[2026-01-09 09:59:12] 2026-01-09 08:59:12,131 [wrapper] cleanup supervisor_pilot  6881 16350
[2026-01-09 09:59:12] 2026-01-09 08:59:12,137 [wrapper] Test setup, not cleaning
[2026-01-09 09:59:12] 2026-01-09 08:59:12,146 [wrapper] apfmon messages muted
[2026-01-09 09:59:12] 2026-01-09 08:59:12,151 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:59:12] 2026-01-09 08:59:12,156 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:59:12]  *** Error codes and diagnostics ***
[2026-01-09 09:59:12]     "exeErrorCode": 0,
[2026-01-09 09:59:12]     "exeErrorDiag": "",
[2026-01-09 09:59:12]     "pilotErrorCode": 0,
[2026-01-09 09:59:12]     "pilotErrorDiag": "",
[2026-01-09 09:59:12]  *** Listing of results directory ***
[2026-01-09 09:59:12] total 443232
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 09:59:12] -rwx------. 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc       100 Jan  9 07:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:59:12] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 07:19 run_atlas
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc       105 Jan  9 07:19 job.xml
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc      6390 Jan  9 07:19 init_data.xml
[2026-01-09 09:59:12] -rw-r--r--. 2 boinc boinc 224066117 Jan  9 07:19 EVNT.47898824._001167.pool.root.1
[2026-01-09 09:59:12] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:19 start_atlas.sh
[2026-01-09 09:59:12] drwxrwx--x. 2 boinc boinc        68 Jan  9 07:19 shared
[2026-01-09 09:59:12] -rw-r--r--. 2 boinc boinc    592398 Jan  9 07:19 input.tar.gz
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc         0 Jan  9 07:19 boinc_lockfile
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc      2520 Jan  9 07:19 pandaJob.out
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc    989771 Jan  9 07:19 agis_schedconf.cvmfs.json
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc   1516240 Jan  9 07:19 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:59:12] drwx------. 5 boinc boinc      4096 Jan  9 07:19 pilot3
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc 222548640 Jan  9 09:57 HITS.47898826._030168.pool.root.1
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc       530 Jan  9 09:57 boinc_task_state.xml
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc      1014 Jan  9 09:58 memory_monitor_summary.json
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc    399592 Jan  9 09:58 log.47898826._030168.job.log.tgz.1
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc      7767 Jan  9 09:58 heartbeat.json
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:58 boinc_mmap_file
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc        27 Jan  9 09:58 wrapper_checkpoint.txt
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc        95 Jan  9 09:58 pilot_heartbeat.json
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc      4881 Jan  9 09:59 pilotlog.txt
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc   1276698 Jan  9 09:59 log.47898826._030168.job.log.1
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc       357 Jan  9 09:59 output.list
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:59 runtime_log
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc   1699840 Jan  9 09:59 result.tar.gz
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc      8816 Jan  9 09:59 runtime_log.err
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc       652 Jan  9 09:59 76lMDmCZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmt3fKDmno6XMo.diag
[2026-01-09 09:59:12] -rw-r--r--. 1 boinc boinc     20696 Jan  9 09:59 stderr.txt
[2026-01-09 09:59:12] HITS file was successfully produced:
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc 222548640 Jan  9 09:57 shared/HITS.pool.root.1
[2026-01-09 09:59:12]  *** Contents of shared directory: ***
[2026-01-09 09:59:12] total 438408
[2026-01-09 09:59:12] -rw-r--r--. 2 boinc boinc 224066117 Jan  9 07:19 ATLAS.root_0
[2026-01-09 09:59:12] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:19 start_atlas.sh
[2026-01-09 09:59:12] -rw-r--r--. 2 boinc boinc    592398 Jan  9 07:19 input.tar.gz
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc 222548640 Jan  9 09:57 HITS.pool.root.1
[2026-01-09 09:59:12] -rw-------. 1 boinc boinc   1699840 Jan  9 09:59 result.tar.gz
09:59:14 (12610): run_atlas exited; CPU time 71316.271688
09:59:14 (12610): called boinc_finish(0)

</stderr_txt>
]]>

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