Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:49:46 (2160953): wrapper (7.7.26015): starting
19:49:46 (2160953): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 19:49:46] Arguments: --nthreads 8
[2026-01-08 19:49:46] Threads: 8
[2026-01-08 19:49:46] Checking for CVMFS
[2026-01-08 19:49:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 19:49:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 19:49:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 19:49:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 19:49:47] 2.13.3.0 12537 92709 395116 154925 2 423 32155959 40960000 11150 16776704 43 375395240 99.601 394322778 37506 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 19:49:47] CVMFS is ok
[2026-01-08 19:49:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 19:49:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 19:49:47] Further information can be found at the LHC@home message board.
[2026-01-08 19:49:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 19:49:47] Checking for apptainer binary...
[2026-01-08 19:49:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 19:49:47] Running /usr/bin/apptainer --version
[2026-01-08 19:49:47] apptainer version 1.4.5-2.el9
[2026-01-08 19:49:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 19:49:48] c7-11-14.aglt2.org
[2026-01-08 19:49:48] apptainer works
[2026-01-08 19:49:48] Set ATHENA_PROC_NUMBER=8
[2026-01-08 19:49:48] Set ATHENA_CORE_NUMBER=8
[2026-01-08 19:49:48] Starting ATLAS job with PandaID=6963153518
[2026-01-08 19:49:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:48:29]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:48:29] 2026-01-09 11:47:28,475 | INFO     | executing command: lscpu
[2026-01-09 06:48:29] 2026-01-09 11:47:28,520 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 06:48:29] 2026-01-09 11:47:29,589 | INFO     | time since job start (39438s) is within the limit (349056.0s)
[2026-01-09 06:48:29] 2026-01-09 11:47:30,098 | INFO     | monitor loop #2310: job 0:6963153518 is in state 'finished'
[2026-01-09 06:48:29] 2026-01-09 11:47:30,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:48:29] 2026-01-09 11:47:31,595 | INFO     | time since job start (39440s) is within the limit (349056.0s)
[2026-01-09 06:48:29] 2026-01-09 11:47:32,602 | INFO     | monitor loop #2311: job 0:6963153518 is in state 'finished'
[2026-01-09 06:48:29] 2026-01-09 11:47:32,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:48:29] 2026-01-09 11:47:33,144 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:48:29] 2026-01-09 11:47:33,173 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3288.783296874999
[2026-01-09 06:48:29] 2026-01-09 11:47:33,192 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963153518/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:48:29] 2026-01-09 11:47:33,192 | INFO     | extracted standard info from prmon json
[2026-01-09 06:48:29] 2026-01-09 11:47:33,192 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:48:29] 2026-01-09 11:47:33,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:48:29] 2026-01-09 11:47:33,197 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:48:29] 2026-01-09 11:47:33,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:48:29] 2026-01-09 11:47:33,214 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:48:29] 2026-01-09 11:47:33,214 | INFO     | sum of square deviations: 83592460805.69737
[2026-01-09 06:48:29] 2026-01-09 11:47:33,231 | INFO     | sum of deviations: 119845358174.7028
[2026-01-09 06:48:29] 2026-01-09 11:47:33,231 | INFO     | mean x: 1767939534.3900928
[2026-01-09 06:48:29] 2026-01-09 11:47:33,231 | INFO     | mean y: 2509939.9535603714
[2026-01-09 06:48:29] 2026-01-09 11:47:33,231 | INFO     | intersect: -2532160587.6038365
[2026-01-09 06:48:29] 2026-01-09 11:47:33,236 | INFO     | chi2: 1.3472253765244935
[2026-01-09 06:48:29] 2026-01-09 11:47:33,237 | INFO     | sum of square deviations: 81666424566.3558
[2026-01-09 06:48:29] 2026-01-09 11:47:33,266 | INFO     | sum of deviations: 118490876254.4695
[2026-01-09 06:48:29] 2026-01-09 11:47:33,266 | INFO     | mean x: 1767939381.8907957
[2026-01-09 06:48:29] 2026-01-09 11:47:33,266 | INFO     | mean y: 2509832.7067082683
[2026-01-09 06:48:29] 2026-01-09 11:47:33,267 | INFO     | intersect: -2562616382.1040616
[2026-01-09 06:48:29] 2026-01-09 11:47:33,267 | INFO     | chi2: 1.3472949366299818
[2026-01-09 06:48:29] 2026-01-09 11:47:33,267 | INFO     | current chi2=1.3472949366299818 (change=-0.005163212236081583 %)
[2026-01-09 06:48:29] 2026-01-09 11:47:33,267 | INFO     | right removable region: 640
[2026-01-09 06:48:29] 2026-01-09 11:47:33,268 | INFO     | sum of square deviations: 81666230709.20448
[2026-01-09 06:48:29] 2026-01-09 11:47:33,275 | INFO     | sum of deviations: 32108152125.252743
[2026-01-09 06:48:29] 2026-01-09 11:47:33,276 | INFO     | mean x: 1767939686.8970358
[2026-01-09 06:48:29] 2026-01-09 11:47:33,276 | INFO     | mean y: 2516859.1856474257
[2026-01-09 06:48:29] 2026-01-09 11:47:33,276 | INFO     | intersect: -692571868.7034898
[2026-01-09 06:48:29] 2026-01-09 11:47:33,276 | INFO     | chi2: 0.0891590769726694
[2026-01-09 06:48:29] 2026-01-09 11:47:33,276 | INFO     | current chi2=0.0891590769726694 (change=93.38202215262027 %)
[2026-01-09 06:48:29] 2026-01-09 11:47:33,277 | INFO     | sum of square deviations: 79769853982.95607
[2026-01-09 06:48:29] 2026-01-09 11:47:33,285 | INFO     | sum of deviations: 18752093239.465416
[2026-01-09 06:48:29] 2026-01-09 11:47:33,285 | INFO     | mean x: 1767939839.4025156
[2026-01-09 06:48:29] 2026-01-09 11:47:33,285 | INFO     | mean y: 2517931.709119497
[2026-01-09 06:48:29] 2026-01-09 11:47:33,285 | INFO     | intersect: -413084843.7118433
[2026-01-09 06:48:29] 2026-01-09 11:47:33,286 | INFO     | chi2: 0.07214452145033279
[2026-01-09 06:48:29] 2026-01-09 11:47:33,286 | INFO     | current chi2=0.07214452145033279 (change=19.08336885043371 %)
[2026-01-09 06:48:29] 2026-01-09 11:47:33,286 | INFO     | left removable region: 20
[2026-01-09 06:48:29] 2026-01-09 11:47:33,286 | INFO     | sum of square deviations: 73899353846.12091
[2026-01-09 06:48:29] 2026-01-09 11:47:33,294 | INFO     | sum of deviations: 39251213792.91129
[2026-01-09 06:48:29] 2026-01-09 11:47:33,294 | INFO     | mean x: 1767939961.4112904
[2026-01-09 06:48:29] 2026-01-09 11:47:33,294 | INFO     | mean y: 2516098.0983870965
[2026-01-09 06:48:29] 2026-01-09 11:47:33,294 | INFO     | intersect: -936514973.0376765
[2026-01-09 06:48:29] 2026-01-09 11:47:33,294 | INFO     | chi2: 0.04995567089293948
[2026-01-09 06:48:29] 2026-01-09 11:47:33,295 | INFO     | current memory leak: 0.53 B/s (using 620 data points, chi2=0.05)
[2026-01-09 06:48:29] 2026-01-09 11:47:33,295 | INFO     | could have reported an average CPU frequency of 3290 MHz (25 samples)
[2026-01-09 06:48:29] 2026-01-09 11:47:33,295 | INFO     | ..............................
[2026-01-09 06:48:29] 2026-01-09 11:47:33,295 | INFO     | . Timing measurements:
[2026-01-09 06:48:29] 2026-01-09 11:47:33,295 | INFO     | . get job = 0 s
[2026-01-09 06:48:29] 2026-01-09 11:47:33,296 | INFO     | . initial setup = 2 s
[2026-01-09 06:48:29] 2026-01-09 11:47:33,296 | INFO     | . payload setup = 10 s
[2026-01-09 06:48:29] 2026-01-09 11:47:33,296 | INFO     | . stage-in = 0 s
[2026-01-09 06:48:29] 2026-01-09 11:47:33,296 | INFO     | . payload execution = 39386 s
[2026-01-09 06:48:29] 2026-01-09 11:47:33,296 | INFO     | . stage-out = 2 s
[2026-01-09 06:48:29] 2026-01-09 11:47:33,296 | INFO     | . log creation = 0 s
[2026-01-09 06:48:29] 2026-01-09 11:47:33,296 | INFO     | ..............................
[2026-01-09 06:48:29] 2026-01-09 11:47:33,395 | INFO     | 
[2026-01-09 06:48:29] 2026-01-09 11:47:33,395 | INFO     | job summary report
[2026-01-09 06:48:29] 2026-01-09 11:47:33,395 | INFO     | --------------------------------------------------
[2026-01-09 06:48:29] 2026-01-09 11:47:33,395 | INFO     | PanDA job id: 6963153518
[2026-01-09 06:48:29] 2026-01-09 11:47:33,395 | INFO     | task id: 47898826
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | errors: (none)
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | pilot state: finished 
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | transexitcode: 0
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | exeerrorcode: 0
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | exeerrordiag: 
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | exitcode: 0
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | exitmsg: OK
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | cpuconsumptiontime: 45868 s
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | nevents: 400
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | neventsw: 0
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | pid: 2174361
[2026-01-09 06:48:29] 2026-01-09 11:47:33,396 | INFO     | pgrp: 2174361
[2026-01-09 06:48:29] 2026-01-09 11:47:33,397 | INFO     | corecount: 8
[2026-01-09 06:48:29] 2026-01-09 11:47:33,397 | INFO     | event service: False
[2026-01-09 06:48:29] 2026-01-09 11:47:33,397 | INFO     | sizes: {0: 2283143, 1: 2283999, 12: 2283999, 13: 2284289, 22: 2284345, 39400: 2326875, 39402: 2335873, 39404: 2335929, 39411: 2336187}
[2026-01-09 06:48:29] 2026-01-09 11:47:33,397 | INFO     | --------------------------------------------------
[2026-01-09 06:48:29] 2026-01-09 11:47:33,397 | INFO     | 
[2026-01-09 06:48:29] 2026-01-09 11:47:33,397 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 06:48:29] 2026-01-09 11:47:33,451 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,451 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,451 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,451 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,452 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:48:29] 2026-01-09 11:47:33,453 | INFO     | job 6963153518 has completed (purged errors)
[2026-01-09 06:48:29] 2026-01-09 11:47:33,453 | INFO     | overall cleanup function is called
[2026-01-09 06:48:29] 2026-01-09 11:47:34,463 | INFO     | --- collectZombieJob: --- 10, [2174361]
[2026-01-09 06:48:29] 2026-01-09 11:47:34,463 | INFO     | zombie collector waiting for pid 2174361
[2026-01-09 06:48:29] 2026-01-09 11:47:34,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:48:29] 2026-01-09 11:47:34,463 | INFO     | collected zombie processes
[2026-01-09 06:48:29] 2026-01-09 11:47:34,463 | INFO     | will attempt to kill all subprocesses of pid=2174361
[2026-01-09 06:48:29] 2026-01-09 11:47:34,752 | INFO     | process IDs to be killed: [2174361] (in reverse order)
[2026-01-09 06:48:29] 2026-01-09 11:47:34,856 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:48:29] 2026-01-09 11:47:34,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:48:29] 2026-01-09 11:47:34,869 | INFO     | did not find any defunct processes belonging to 2174361
[2026-01-09 06:48:29] 2026-01-09 11:47:34,882 | INFO     | did not find any defunct processes belonging to 2174361
[2026-01-09 06:48:29] 2026-01-09 11:47:34,882 | INFO     | ready for new job
[2026-01-09 06:48:29] 2026-01-09 11:47:34,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:48:29] 2026-01-09 11:47:34,886 | INFO     | ***************************************
[2026-01-09 06:48:29] 2026-01-09 11:47:34,886 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:48:29] 2026-01-09 11:47:34,886 | INFO     | ***************************************
[2026-01-09 06:48:29] 2026-01-09 11:47:34,886 | INFO     | 
[2026-01-09 06:48:29] 2026-01-09 11:47:34,890 | INFO     | architecture information:
[2026-01-09 06:48:29] 2026-01-09 11:47:34,890 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:48:29] 2026-01-09 11:47:34,906 | INFO     | cat /etc/os-release:
[2026-01-09 06:48:29] NAME="CentOS Linux"
[2026-01-09 06:48:29] VERSION="7 (Core)"
[2026-01-09 06:48:29] ID="centos"
[2026-01-09 06:48:29] ID_LIKE="rhel fedora"
[2026-01-09 06:48:29] VERSION_ID="7"
[2026-01-09 06:48:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:48:29] ANSI_COLOR="0;31"
[2026-01-09 06:48:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:48:29] HOME_URL="https://www.centos.org/"
[2026-01-09 06:48:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:48:29] 
[2026-01-09 06:48:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:48:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:48:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:48:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:48:29] 
[2026-01-09 06:48:29] 2026-01-09 11:47:34,907 | INFO     | ***************************************
[2026-01-09 06:48:29] 2026-01-09 11:47:35,409 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 06:48:29] 2026-01-09 11:47:35,426 | INFO     | sufficient remaining disk space (84866498560 B)
[2026-01-09 06:48:29] 2026-01-09 11:47:35,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:48:29] 2026-01-09 11:47:35,426 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:48:29] 2026-01-09 11:47:35,426 | INFO     | update_server=False
[2026-01-09 06:48:29] 2026-01-09 11:47:35,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:48:29] 2026-01-09 11:47:35,562 | INFO     | all payload control threads have been joined
[2026-01-09 06:48:29] 2026-01-09 11:47:35,992 | INFO     | all data control threads have been joined
[2026-01-09 06:48:29] 2026-01-09 11:47:36,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:48:29] 2026-01-09 11:47:36,116 | INFO     | aborting loop
[2026-01-09 06:48:29] 2026-01-09 11:47:36,431 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:36,567 | INFO     | [payload] control thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:36,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:48:29] 2026-01-09 11:47:36,944 | INFO     | all job control threads have been joined
[2026-01-09 06:48:29] 2026-01-09 11:47:36,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:48:29] 2026-01-09 11:47:36,999 | INFO     | [data] control thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:37,019 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:37,117 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:37,121 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:37,189 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:37,194 | INFO     | [job] validate thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:37,639 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:37,688 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:37,724 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:37,949 | INFO     | [job] control thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:38,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:48:29] 2026-01-09 11:47:38,910 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:39,411 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:40,962 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:47:45,773 | INFO     | job.realtimelogging is not enabled
[2026-01-09 06:48:29] 2026-01-09 11:47:46,778 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:48:29] 2026-01-09 11:48:05,019 | INFO     | PID=2165664 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 06:48:29] 2026-01-09 11:48:05,019 | INFO     | .. there are 11 such processes running
[2026-01-09 06:48:29] 2026-01-09 11:48:05,020 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:48:29] 2026-01-09 11:48:05,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:48:29] 2026-01-09 11:48:05,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:48:29] 2026-01-09 11:48:23,412 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:48:29] 2026-01-09 11:48:24,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140495428151104)>', '<ExcThread(monitor, started 140494914955008)>']
[2026-01-09 06:48:29] 2026-01-09 11:48:25,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:48:29] 2026-01-09 11:48:25,124 | INFO     | [monitor] control thread has ended
[2026-01-09 06:48:29] 2026-01-09 11:48:29,388 | INFO     | all workflow threads have been joined
[2026-01-09 06:48:29] 2026-01-09 11:48:29,388 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:48:29] 2026-01-09 11:48:29,388 | INFO     | traces error code: 0
[2026-01-09 06:48:29] 2026-01-09 11:48:29,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:48:29] 2026-01-09 11:48:29,483 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:48:29] 2026-01-09 11:48:29,493 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:48:29] 2026-01-09 11:48:29,496 [wrapper] pilotpid: 2165664
[2026-01-09 06:48:29] 2026-01-09 11:48:29,498 [wrapper] Pilot exit status: 0
[2026-01-09 06:48:29] 2026-01-09 11:48:29,510 [wrapper] pandaids: 6963153518
[2026-01-09 06:48:29] 2026-01-09 11:48:29,578 [wrapper] cleanup supervisor_pilot 3730406 2165665
[2026-01-09 06:48:29] 2026-01-09 11:48:29,581 [wrapper] Test setup, not cleaning
[2026-01-09 06:48:29] 2026-01-09 11:48:29,584 [wrapper] apfmon messages muted
[2026-01-09 06:48:29] 2026-01-09 11:48:29,586 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:48:29] 2026-01-09 11:48:29,589 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:48:29]  *** Error codes and diagnostics ***
[2026-01-09 06:48:29]     "exeErrorCode": 0,
[2026-01-09 06:48:29]     "exeErrorDiag": "",
[2026-01-09 06:48:29]     "pilotErrorCode": 0,
[2026-01-09 06:48:29]     "pilotErrorDiag": "",
[2026-01-09 06:48:29]  *** Listing of results directory ***
[2026-01-09 06:48:29] total 455576
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 06:48:29] -rwx------. 1 boincer umatlas     36322 Jan  8 14:09 runpilot2-wrapper.sh
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:11 queuedata.json
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas       100 Jan  8 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:48:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 19:49 run_atlas
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas       105 Jan  8 19:49 job.xml
[2026-01-09 06:48:29] -rw-r--r--. 2 boincer umatlas 228879719 Jan  8 19:49 EVNT.47898824._001168.pool.root.1
[2026-01-09 06:48:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 19:49 start_atlas.sh
[2026-01-09 06:48:29] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 19:49 shared
[2026-01-09 06:48:29] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 19:49 input.tar.gz
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas         0 Jan  8 19:49 boinc_lockfile
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas      2520 Jan  8 19:49 pandaJob.out
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas        57 Jan  8 19:49 setup.sh.local
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas    989837 Jan  8 19:50 agis_schedconf.cvmfs.json
[2026-01-09 06:48:29] drwx------. 5 boincer umatlas      4096 Jan  8 19:50 pilot3
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas      6902 Jan  9 06:46 init_data.xml
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas 222468445 Jan  9 06:46 HITS.47898826._030191.pool.root.1
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas       530 Jan  9 06:46 boinc_task_state.xml
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas      1030 Jan  9 06:47 memory_monitor_summary.json
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas   1516240 Jan  9 06:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas    777047 Jan  9 06:47 log.47898826._030191.job.log.tgz.1
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas      7770 Jan  9 06:47 heartbeat.json
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 06:48 boinc_mmap_file
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas        28 Jan  9 06:48 wrapper_checkpoint.txt
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas        95 Jan  9 06:48 pilot_heartbeat.json
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas      4896 Jan  9 06:48 pilotlog.txt
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas   4842554 Jan  9 06:48 log.47898826._030191.job.log.1
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas       357 Jan  9 06:48 output.list
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas       620 Jan  9 06:48 runtime_log
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas   5642240 Jan  9 06:48 result.tar.gz
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 06:48 runtime_log.err
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas       659 Jan  9 06:48 OlzMDmCZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm33fKDmhW9Son.diag
[2026-01-09 06:48:29] -rw-r--r--. 1 boincer umatlas     21460 Jan  9 06:48 stderr.txt
[2026-01-09 06:48:29] HITS file was successfully produced:
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas 222468445 Jan  9 06:46 shared/HITS.pool.root.1
[2026-01-09 06:48:29]  *** Contents of shared directory: ***
[2026-01-09 06:48:29] total 446888
[2026-01-09 06:48:29] -rw-r--r--. 2 boincer umatlas 228879719 Jan  8 19:49 ATLAS.root_0
[2026-01-09 06:48:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 19:49 start_atlas.sh
[2026-01-09 06:48:29] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 19:49 input.tar.gz
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas 222468445 Jan  9 06:46 HITS.pool.root.1
[2026-01-09 06:48:29] -rw-------. 1 boincer umatlas   5642240 Jan  9 06:48 result.tar.gz
06:48:31 (2160953): run_atlas exited; CPU time 46507.450496
06:48:31 (2160953): called boinc_finish(0)

</stderr_txt>
]]>

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