Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:39:00 (330556): wrapper (7.7.26015): starting
03:39:00 (330556): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 03:39:00] Arguments: --nthreads 3
[2026-01-09 03:39:00] Threads: 3
[2026-01-09 03:39:00] Checking for CVMFS
[2026-01-09 03:39:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 03:39:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 03:39:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 03:39:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 03:39:01] 2.9.2.0 86975 1021 71380 154927 1 56 11640670 36864000 0 130560 0 644168 99.987 41207 18241 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 03:39:01] CVMFS is ok
[2026-01-09 03:39:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 03:39:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 03:39:01] Further information can be found at the LHC@home message board.
[2026-01-09 03:39:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 03:39:01] Checking for apptainer binary...
[2026-01-09 03:39:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 03:39:01] Running /usr/bin/apptainer --version
[2026-01-09 03:39:01] apptainer version 1.4.1-1.1
[2026-01-09 03:39:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 03:39:01] thA330a
[2026-01-09 03:39:01] apptainer works
[2026-01-09 03:39:01] Set ATHENA_PROC_NUMBER=3
[2026-01-09 03:39:01] Set ATHENA_CORE_NUMBER=3
[2026-01-09 03:39:01] Starting ATLAS job with PandaID=6963153142
[2026-01-09 03:39:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:33:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:33:21] 2026-01-09 04:32:20,631 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:20,697 | INFO     | all job control threads have been joined
[2026-01-09 05:33:21] 2026-01-09 04:32:20,697 | INFO     | [payload] control thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:20,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:33:21] 2026-01-09 04:32:21,139 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:21,181 | INFO     | [job] validate thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:21,207 | INFO     | [data] control thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:21,236 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:21,314 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:21,329 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:21,374 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:21,703 | INFO     | [job] control thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:24,788 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:29,425 | INFO     | job.realtimelogging is not enabled
[2026-01-09 05:33:21] 2026-01-09 04:32:30,431 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:33:21] 2026-01-09 04:32:49,077 | INFO     | PID=334278 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 05:33:21] 2026-01-09 04:32:49,077 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:33:21] 2026-01-09 04:32:49,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:33:21] 2026-01-09 04:32:49,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:33:21] 2026-01-09 04:33:15,447 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:33:21] 2026-01-09 04:33:15,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140665702213440)>', '<ExcThread(monitor, started 140665077888768)>']
[2026-01-09 05:33:21] 2026-01-09 04:33:16,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:33:21] 2026-01-09 04:33:16,219 | INFO     | [monitor] control thread has ended
[2026-01-09 05:33:21] 2026-01-09 04:33:20,896 | INFO     | all workflow threads have been joined
[2026-01-09 05:33:21] 2026-01-09 04:33:20,896 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:33:21] 2026-01-09 04:33:20,896 | INFO     | traces error code: 0
[2026-01-09 05:33:21] 2026-01-09 04:33:20,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:33:21] 2026-01-09 04:33:20,946 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:33:21] 2026-01-09 04:33:20,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:33:21] 2026-01-09 04:33:20,951 [wrapper] pilotpid: 334278
[2026-01-09 05:33:21] 2026-01-09 04:33:20,953 [wrapper] Pilot exit status: 0
[2026-01-09 05:33:21] 2026-01-09 04:33:20,960 [wrapper] pandaids: 6963153142
[2026-01-09 05:33:21] 2026-01-09 04:33:20,978 [wrapper] cleanup supervisor_pilot  355119 334279
[2026-01-09 05:33:21] 2026-01-09 04:33:20,980 [wrapper] Test setup, not cleaning
[2026-01-09 05:33:21] 2026-01-09 04:33:20,983 [wrapper] apfmon messages muted
[2026-01-09 05:33:21] 2026-01-09 04:33:20,985 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:33:21] 2026-01-09 04:33:20,987 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:33:21]  *** Error codes and diagnostics ***
[2026-01-09 05:33:21]     "exeErrorCode": 0,
[2026-01-09 05:33:21]     "exeErrorDiag": "",
[2026-01-09 05:33:21]     "pilotErrorCode": 0,
[2026-01-09 05:33:21]     "pilotErrorDiag": "",
[2026-01-09 05:33:21]  *** Listing of results directory ***
[2026-01-09 05:33:21] total 442380
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 05:33:21] -rwx------ 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc       100 Jan  9 03:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:33:21] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 03:39 run_atlas
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc       105 Jan  9 03:39 job.xml
[2026-01-09 05:33:21] -rw-r--r-- 2 boinc boinc 224668471 Jan  9 03:39 EVNT.47898824._001154.pool.root.1
[2026-01-09 05:33:21] -rw-r--r-- 2 boinc boinc    592399 Jan  9 03:39 input.tar.gz
[2026-01-09 05:33:21] -rw-r--r-- 2 boinc boinc     15847 Jan  9 03:39 start_atlas.sh
[2026-01-09 05:33:21] drwxrwx--x 2 boinc boinc      4096 Jan  9 03:39 shared
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc         0 Jan  9 03:39 boinc_setup_complete
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc      6440 Jan  9 03:39 init_data.xml
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc         0 Jan  9 03:39 boinc_lockfile
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc      2520 Jan  9 03:39 pandaJob.out
[2026-01-09 05:33:21] -rw------- 1 boinc boinc    989763 Jan  9 03:39 agis_schedconf.cvmfs.json
[2026-01-09 05:33:21] -rw------- 1 boinc boinc   1516240 Jan  9 03:39 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:33:21] drwx------ 5 boinc boinc      4096 Jan  9 03:39 pilot3
[2026-01-09 05:33:21] -rw------- 1 boinc boinc 221905324 Jan  9 05:31 HITS.47898826._029837.pool.root.1
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc       529 Jan  9 05:32 boinc_task_state.xml
[2026-01-09 05:33:21] -rw------- 1 boinc boinc      1019 Jan  9 05:32 memory_monitor_summary.json
[2026-01-09 05:33:21] -rw------- 1 boinc boinc    282543 Jan  9 05:32 log.47898826._029837.job.log.tgz.1
[2026-01-09 05:33:21] -rw------- 1 boinc boinc      7761 Jan  9 05:32 heartbeat.json
[2026-01-09 05:33:21] -rw------- 1 boinc boinc        95 Jan  9 05:32 pilot_heartbeat.json
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc        27 Jan  9 05:33 wrapper_checkpoint.txt
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc      8192 Jan  9 05:33 boinc_mmap_file
[2026-01-09 05:33:21] -rw------- 1 boinc boinc      4823 Jan  9 05:33 pilotlog.txt
[2026-01-09 05:33:21] -rw------- 1 boinc boinc    979209 Jan  9 05:33 log.47898826._029837.job.log.1
[2026-01-09 05:33:21] -rw------- 1 boinc boinc       357 Jan  9 05:33 output.list
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc       620 Jan  9 05:33 runtime_log
[2026-01-09 05:33:21] -rw------- 1 boinc boinc   1280000 Jan  9 05:33 result.tar.gz
[2026-01-09 05:33:21] -rw------- 1 boinc boinc       660 Jan  9 05:33 scDLDm0YAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmD2fKDmdFc9fn.diag
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc      8902 Jan  9 05:33 runtime_log.err
[2026-01-09 05:33:21] -rw-r--r-- 1 boinc boinc      6227 Jan  9 05:33 stderr.txt
[2026-01-09 05:33:21] HITS file was successfully produced:
[2026-01-09 05:33:21] -rw------- 1 boinc boinc 221905324 Jan  9 05:31 shared/HITS.pool.root.1
[2026-01-09 05:33:21]  *** Contents of shared directory: ***
[2026-01-09 05:33:21] total 437968
[2026-01-09 05:33:21] -rw-r--r-- 2 boinc boinc 224668471 Jan  9 03:39 ATLAS.root_0
[2026-01-09 05:33:21] -rw-r--r-- 2 boinc boinc    592399 Jan  9 03:39 input.tar.gz
[2026-01-09 05:33:21] -rw-r--r-- 2 boinc boinc     15847 Jan  9 03:39 start_atlas.sh
[2026-01-09 05:33:21] -rw------- 1 boinc boinc 221905324 Jan  9 05:31 HITS.pool.root.1
[2026-01-09 05:33:21] -rw------- 1 boinc boinc   1280000 Jan  9 05:33 result.tar.gz
05:33:22 (330556): run_atlas exited; CPU time 19749.717357
05:33:22 (330556): called boinc_finish(0)

</stderr_txt>
]]>

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