Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:18:18 (3151058): wrapper (7.7.26015): starting
14:18:18 (3151058): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 14:18:18] Arguments: --nthreads 3
[2026-01-09 14:18:18] Threads: 3
[2026-01-09 14:18:18] Checking for CVMFS
[2026-01-09 14:18:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:18:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:18:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:18:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:18:18] 2.9.2.0 2563955 2414 80032 154945 3 56 22758640 36864000 0 130560 0 1503429 99.989 90422 5091 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 14:18:18] CVMFS is ok
[2026-01-09 14:18:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:18:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:18:18] Further information can be found at the LHC@home message board.
[2026-01-09 14:18:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:18:18] Checking for apptainer binary...
[2026-01-09 14:18:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:18:18] Running /usr/bin/apptainer --version
[2026-01-09 14:18:18] apptainer version 1.4.1-1.1
[2026-01-09 14:18:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:18:18] thA349
[2026-01-09 14:18:18] apptainer works
[2026-01-09 14:18:18] Set ATHENA_PROC_NUMBER=3
[2026-01-09 14:18:18] Set ATHENA_CORE_NUMBER=3
[2026-01-09 14:18:18] Starting ATLAS job with PandaID=6963153235
[2026-01-09 14:18:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:07:38]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:07:38] 2026-01-09 15:06:51,606 | INFO     | architecture information:
[2026-01-09 16:07:38] 2026-01-09 15:06:51,606 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:07:38] 2026-01-09 15:06:51,614 | INFO     | cat /etc/os-release:
[2026-01-09 16:07:38] NAME="CentOS Linux"
[2026-01-09 16:07:38] VERSION="7 (Core)"
[2026-01-09 16:07:38] ID="centos"
[2026-01-09 16:07:38] ID_LIKE="rhel fedora"
[2026-01-09 16:07:38] VERSION_ID="7"
[2026-01-09 16:07:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:07:38] ANSI_COLOR="0;31"
[2026-01-09 16:07:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:07:38] HOME_URL="https://www.centos.org/"
[2026-01-09 16:07:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:07:38] 
[2026-01-09 16:07:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:07:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:07:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:07:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:07:38] 
[2026-01-09 16:07:38] 2026-01-09 15:06:51,614 | INFO     | ***************************************
[2026-01-09 16:07:38] 2026-01-09 15:06:52,117 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 16:07:38] 2026-01-09 15:06:52,129 | INFO     | sufficient remaining disk space (282356350976 B)
[2026-01-09 16:07:38] 2026-01-09 15:06:52,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:07:38] 2026-01-09 15:06:52,130 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:07:38] 2026-01-09 15:06:52,130 | INFO     | update_server=False
[2026-01-09 16:07:38] 2026-01-09 15:06:52,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:07:38] 2026-01-09 15:06:52,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:07:38] 2026-01-09 15:06:52,225 | INFO     | all payload control threads have been joined
[2026-01-09 16:07:38] 2026-01-09 15:06:52,442 | INFO     | all data control threads have been joined
[2026-01-09 16:07:38] 2026-01-09 15:06:52,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:07:38] 2026-01-09 15:06:52,613 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 16:07:38] 2026-01-09 15:06:52,613 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 16:07:38] 2026-01-09 15:06:52,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:07:38] 2026-01-09 15:06:52,613 | INFO     | will abort loop
[2026-01-09 16:07:38] 2026-01-09 15:06:52,815 | INFO     | all job control threads have been joined
[2026-01-09 16:07:38] 2026-01-09 15:06:53,135 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:53,136 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:53,230 | INFO     | [payload] control thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:53,447 | INFO     | [data] control thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:53,452 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:53,500 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:53,598 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:53,619 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:53,821 | INFO     | [job] control thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:53,964 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:54,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:07:38] 2026-01-09 15:06:54,121 | INFO     | [job] validate thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:54,231 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:54,234 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:54,550 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:54,616 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:06:58,092 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:07:38] 2026-01-09 15:07:22,775 | INFO     | PID=3154779 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:07:38] 2026-01-09 15:07:22,776 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:07:38] 2026-01-09 15:07:22,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:07:38] 2026-01-09 15:07:22,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:07:38] 2026-01-09 15:07:32,236 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:07:38] 2026-01-09 15:07:33,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494712842048)>', '<ExcThread(monitor, started 140494432601856)>']
[2026-01-09 16:07:38] 2026-01-09 15:07:33,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:07:38] 2026-01-09 15:07:33,835 | INFO     | [monitor] control thread has ended
[2026-01-09 16:07:38] 2026-01-09 15:07:38,703 | INFO     | all workflow threads have been joined
[2026-01-09 16:07:38] 2026-01-09 15:07:38,703 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:07:38] 2026-01-09 15:07:38,703 | INFO     | traces error code: 0
[2026-01-09 16:07:38] 2026-01-09 15:07:38,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:07:38] 2026-01-09 15:07:38,754 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:07:38] 2026-01-09 15:07:38,757 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:07:38] 2026-01-09 15:07:38,759 [wrapper] pilotpid: 3154779
[2026-01-09 16:07:38] 2026-01-09 15:07:38,761 [wrapper] Pilot exit status: 0
[2026-01-09 16:07:38] 2026-01-09 15:07:38,768 [wrapper] pandaids: 6963153235
[2026-01-09 16:07:38] 2026-01-09 15:07:38,784 [wrapper] cleanup supervisor_pilot 3175545 3154780
[2026-01-09 16:07:38] 2026-01-09 15:07:38,787 [wrapper] Test setup, not cleaning
[2026-01-09 16:07:38] 2026-01-09 15:07:38,789 [wrapper] apfmon messages muted
[2026-01-09 16:07:38] 2026-01-09 15:07:38,791 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:07:38] 2026-01-09 15:07:38,794 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:07:38]  *** Error codes and diagnostics ***
[2026-01-09 16:07:38]     "exeErrorCode": 0,
[2026-01-09 16:07:38]     "exeErrorDiag": "",
[2026-01-09 16:07:38]     "pilotErrorCode": 0,
[2026-01-09 16:07:38]     "pilotErrorDiag": "",
[2026-01-09 16:07:38]  *** Listing of results directory ***
[2026-01-09 16:07:38] total 433152
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 16:07:38] -rwx------ 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc       100 Jan  9 14:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:07:38] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 14:18 run_atlas
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc       105 Jan  9 14:18 job.xml
[2026-01-09 16:07:38] -rw-r--r-- 2 boinc boinc 224159761 Jan  9 14:18 EVNT.47898824._001158.pool.root.1
[2026-01-09 16:07:38] drwxrwx--x 2 boinc boinc      4096 Jan  9 14:18 shared
[2026-01-09 16:07:38] -rw-r--r-- 2 boinc boinc    592393 Jan  9 14:18 input.tar.gz
[2026-01-09 16:07:38] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:18 start_atlas.sh
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:18 boinc_setup_complete
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc      6445 Jan  9 14:18 init_data.xml
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:18 boinc_lockfile
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc      2520 Jan  9 14:18 pandaJob.out
[2026-01-09 16:07:38] -rw------- 1 boinc boinc    989377 Jan  9 14:18 agis_schedconf.cvmfs.json
[2026-01-09 16:07:38] -rw------- 1 boinc boinc   1516240 Jan  9 14:18 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:07:38] drwx------ 5 boinc boinc      4096 Jan  9 14:18 pilot3
[2026-01-09 16:07:38] -rw------- 1 boinc boinc 213048063 Jan  9 16:06 HITS.47898826._029930.pool.root.1
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc       529 Jan  9 16:06 boinc_task_state.xml
[2026-01-09 16:07:38] -rw------- 1 boinc boinc      1013 Jan  9 16:06 memory_monitor_summary.json
[2026-01-09 16:07:38] -rw------- 1 boinc boinc    272697 Jan  9 16:06 log.47898826._029930.job.log.tgz.1
[2026-01-09 16:07:38] -rw------- 1 boinc boinc      7744 Jan  9 16:06 heartbeat.json
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc        27 Jan  9 16:07 wrapper_checkpoint.txt
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc      8192 Jan  9 16:07 boinc_mmap_file
[2026-01-09 16:07:38] -rw------- 1 boinc boinc        95 Jan  9 16:07 pilot_heartbeat.json
[2026-01-09 16:07:38] -rw------- 1 boinc boinc      4938 Jan  9 16:07 pilotlog.txt
[2026-01-09 16:07:38] -rw------- 1 boinc boinc    943054 Jan  9 16:07 log.47898826._029930.job.log.1
[2026-01-09 16:07:38] -rw------- 1 boinc boinc       357 Jan  9 16:07 output.list
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc       620 Jan  9 16:07 runtime_log
[2026-01-09 16:07:38] -rw------- 1 boinc boinc   1239040 Jan  9 16:07 result.tar.gz
[2026-01-09 16:07:38] -rw------- 1 boinc boinc       659 Jan  9 16:07 vETNDmAZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFGlKDmIklZYn.diag
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc      8897 Jan  9 16:07 runtime_log.err
[2026-01-09 16:07:38] -rw-r--r-- 1 boinc boinc      9199 Jan  9 16:07 stderr.txt
[2026-01-09 16:07:38] HITS file was successfully produced:
[2026-01-09 16:07:38] -rw------- 1 boinc boinc 213048063 Jan  9 16:06 shared/HITS.pool.root.1
[2026-01-09 16:07:38]  *** Contents of shared directory: ***
[2026-01-09 16:07:38] total 428780
[2026-01-09 16:07:38] -rw-r--r-- 2 boinc boinc 224159761 Jan  9 14:18 ATLAS.root_0
[2026-01-09 16:07:38] -rw-r--r-- 2 boinc boinc    592393 Jan  9 14:18 input.tar.gz
[2026-01-09 16:07:38] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:18 start_atlas.sh
[2026-01-09 16:07:38] -rw------- 1 boinc boinc 213048063 Jan  9 16:06 HITS.pool.root.1
[2026-01-09 16:07:38] -rw------- 1 boinc boinc   1239040 Jan  9 16:07 result.tar.gz
16:07:40 (3151058): run_atlas exited; CPU time 18857.023020
16:07:40 (3151058): called boinc_finish(0)

</stderr_txt>
]]>

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