Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:41:43 (4983): wrapper (7.7.26015): starting
19:41:43 (4983): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 19:41:43] Arguments: --nthreads 12
[2026-01-08 19:41:43] Threads: 12
[2026-01-08 19:41:43] Checking for CVMFS
[2026-01-08 19:41:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 19:41:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 19:41:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 19:41:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 19:41:43] 2.11.2.0 3165 135956 94312 154925 3 57 18717479 20275200 1 130560 0 50024725 99.886 8092578 40721 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 19:41:43] CVMFS is ok
[2026-01-08 19:41:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 19:41:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 19:41:43] Further information can be found at the LHC@home message board.
[2026-01-08 19:41:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 19:41:43] Checking for apptainer binary...
[2026-01-08 19:41:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 19:41:43] Running /usr/bin/apptainer --version
[2026-01-08 19:41:44] apptainer version 1.3.2-1.el7
[2026-01-08 19:41:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 19:41:45] c-115-40.aglt2.org
[2026-01-08 19:41:45] apptainer works
[2026-01-08 19:41:45] Set ATHENA_PROC_NUMBER=12
[2026-01-08 19:41:45] Set ATHENA_CORE_NUMBER=12
[2026-01-08 19:41:45] Starting ATLAS job with PandaID=6963146420
[2026-01-08 19:41:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:17:15]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:17:15]  status_code=0
[2026-01-08 21:17:15]  storage_token=
[2026-01-08 21:17:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963146420/log.47898826._026800.job.log.tgz.1
[2026-01-08 21:17:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/dc/log.47898826._026800.job.log.tgz.1
[2026-01-08 21:17:15]  workdir=None
[2026-01-08 21:17:15] ]
[2026-01-08 21:17:15] 2026-01-09 02:16:27,668 | INFO     | transferring file log.47898826._026800.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963146420/log.47898826._026800.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-08 21:17:15] 2026-01-09 02:16:27,668 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963146420/log.47898826._026800.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._026800.job
[2026-01-08 21:17:15] 2026-01-09 02:16:27,690 | INFO     | adding to output.list: log.47898826._026800.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/dc/log.47898826._026800.job.log.tg
[2026-01-08 21:17:15] 2026-01-09 02:16:27,691 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 21:17:15] 2026-01-09 02:16:27,691 | INFO     | summary of transferred files:
[2026-01-08 21:17:15] 2026-01-09 02:16:27,692 | INFO     |  -- lfn=log.47898826._026800.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 21:17:15] 2026-01-09 02:16:27,692 | INFO     | stage-out finished correctly
[2026-01-08 21:17:15] 2026-01-09 02:16:29,082 | INFO     | time since job start (5669s) is within the limit (349056.0s)
[2026-01-08 21:17:15] 2026-01-09 02:16:31,087 | INFO     | time since job start (5671s) is within the limit (349056.0s)
[2026-01-08 21:17:15] 2026-01-09 02:16:31,166 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 21:17:15] 2026-01-09 02:16:32,952 | WARNING  | process 15191 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 21:17:15] 2026-01-09 02:16:32,953 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963146420/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:17:15] 2026-01-09 02:16:33,033 | INFO     | number of running child processes to parent process 15191: 1
[2026-01-08 21:17:15] 2026-01-09 02:16:33,033 | INFO     | maximum number of monitored processes: 6
[2026-01-08 21:17:15] 2026-01-09 02:16:33,093 | INFO     | time since job start (5673s) is within the limit (349056.0s)
[2026-01-08 21:17:15] 2026-01-09 02:16:33,935 | INFO     | job 6963146420 has state=finished
[2026-01-08 21:17:15] 2026-01-09 02:16:33,936 | INFO     | preparing for final server update for job 6963146420 in state='finished'
[2026-01-08 21:17:15] 2026-01-09 02:16:33,936 | INFO     | this job has now completed (state=finished)
[2026-01-08 21:17:15] 2026-01-09 02:16:33,936 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 21:17:15] 2026-01-09 02:16:33,937 | INFO     | log transfer has been attempted: DONE
[2026-01-08 21:17:15] 2026-01-09 02:16:33,937 | INFO     | job 6963146420 has finished - writing final server update
[2026-01-08 21:17:15] 2026-01-09 02:16:33,937 | INFO     | total number of processed events: 400 (read)
[2026-01-08 21:17:15] 2026-01-09 02:16:33,938 | INFO     | executing command: lscpu
[2026-01-08 21:17:15] 2026-01-09 02:16:33,965 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 21:17:15] 2026-01-09 02:16:35,099 | INFO     | time since job start (5675s) is within the limit (349056.0s)
[2026-01-08 21:17:15] 2026-01-09 02:16:35,536 | INFO     | monitor loop #422: job 0:6963146420 is in state 'finished'
[2026-01-08 21:17:15] 2026-01-09 02:16:35,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 21:17:15] 2026-01-09 02:16:37,104 | INFO     | time since job start (5677s) is within the limit (349056.0s)
[2026-01-08 21:17:15] 2026-01-09 02:16:38,039 | INFO     | monitor loop #423: job 0:6963146420 is in state 'finished'
[2026-01-08 21:17:15] 2026-01-09 02:16:38,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 21:17:15] 2026-01-09 02:16:38,476 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 21:17:15] 2026-01-09 02:16:38,480 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1806.6666666666667
[2026-01-08 21:17:15] 2026-01-09 02:16:38,483 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963146420/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:17:15] 2026-01-09 02:16:38,484 | INFO     | extracted standard info from prmon json
[2026-01-08 21:17:15] 2026-01-09 02:16:38,484 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:17:15] 2026-01-09 02:16:38,484 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:17:15] 2026-01-09 02:16:38,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:17:15] 2026-01-09 02:16:38,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:17:15] 2026-01-09 02:16:38,486 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:17:15] 2026-01-09 02:16:38,486 | INFO     | sum of square deviations: 197203697.5
[2026-01-08 21:17:15] 2026-01-09 02:16:38,487 | INFO     | sum of deviations: -12570525071.5
[2026-01-08 21:17:15] 2026-01-09 02:16:38,487 | INFO     | mean x: 1767922245.5
[2026-01-08 21:17:15] 2026-01-09 02:16:38,487 | INFO     | mean y: 2796160.7558139535
[2026-01-08 21:17:15] 2026-01-09 02:16:38,487 | INFO     | intersect: 112696985941.45364
[2026-01-08 21:17:15] 2026-01-09 02:16:38,487 | INFO     | chi2: 0.06839866316233552
[2026-01-08 21:17:15] 2026-01-09 02:16:38,487 | INFO     | current memory leak: -63.74 B/s (using 86 data points, chi2=0.07)
[2026-01-08 21:17:15] 2026-01-09 02:16:38,487 | INFO     | could have reported an average CPU frequency of 2242 MHz (7 samples)
[2026-01-08 21:17:15] 2026-01-09 02:16:38,488 | INFO     | ..............................
[2026-01-08 21:17:15] 2026-01-09 02:16:38,488 | INFO     | . Timing measurements:
[2026-01-08 21:17:15] 2026-01-09 02:16:38,488 | INFO     | . get job = 0 s
[2026-01-08 21:17:15] 2026-01-09 02:16:38,488 | INFO     | . initial setup = 2 s
[2026-01-08 21:17:15] 2026-01-09 02:16:38,488 | INFO     | . payload setup = 7 s
[2026-01-08 21:17:15] 2026-01-09 02:16:38,488 | INFO     | . stage-in = 0 s
[2026-01-08 21:17:15] 2026-01-09 02:16:38,488 | INFO     | . payload execution = 5640 s
[2026-01-08 21:17:15] 2026-01-09 02:16:38,488 | INFO     | . stage-out = 0 s
[2026-01-08 21:17:15] 2026-01-09 02:16:38,488 | INFO     | . log creation = 0 s
[2026-01-08 21:17:15] 2026-01-09 02:16:38,489 | INFO     | ..............................
[2026-01-08 21:17:15] 2026-01-09 02:16:38,564 | INFO     | 
[2026-01-08 21:17:15] 2026-01-09 02:16:38,564 | INFO     | job summary report
[2026-01-08 21:17:15] 2026-01-09 02:16:38,564 | INFO     | --------------------------------------------------
[2026-01-08 21:17:15] 2026-01-09 02:16:38,565 | INFO     | PanDA job id: 6963146420
[2026-01-08 21:17:15] 2026-01-09 02:16:38,565 | INFO     | task id: 47898826
[2026-01-08 21:17:15] 2026-01-09 02:16:38,565 | INFO     | errors: (none)
[2026-01-08 21:17:15] 2026-01-09 02:16:38,565 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:17:15] 2026-01-09 02:16:38,565 | INFO     | pilot state: finished 
[2026-01-08 21:17:15] 2026-01-09 02:16:38,565 | INFO     | transexitcode: 0
[2026-01-08 21:17:15] 2026-01-09 02:16:38,566 | INFO     | exeerrorcode: 0
[2026-01-08 21:17:15] 2026-01-09 02:16:38,566 | INFO     | exeerrordiag: 
[2026-01-08 21:17:15] 2026-01-09 02:16:38,566 | INFO     | exitcode: 0
[2026-01-08 21:17:15] 2026-01-09 02:16:38,566 | INFO     | exitmsg: OK
[2026-01-08 21:17:15] 2026-01-09 02:16:38,566 | INFO     | cpuconsumptiontime: 62575 s
[2026-01-08 21:17:15] 2026-01-09 02:16:38,566 | INFO     | nevents: 400
[2026-01-08 21:17:15] 2026-01-09 02:16:38,567 | INFO     | neventsw: 0
[2026-01-08 21:17:15] 2026-01-09 02:16:38,567 | INFO     | pid: 15191
[2026-01-08 21:17:15] 2026-01-09 02:16:38,567 | INFO     | pgrp: 15191
[2026-01-08 21:17:15] 2026-01-09 02:16:38,567 | INFO     | corecount: 12
[2026-01-08 21:17:15] 2026-01-09 02:16:38,567 | INFO     | event service: False
[2026-01-08 21:17:15] 2026-01-09 02:16:38,567 | INFO     | sizes: {0: 2283968, 5: 2284230, 11: 2284286, 5651: 2310897, 5652: 2319895, 5656: 2319951, 5663: 2320273}
[2026-01-08 21:17:15] 2026-01-09 02:16:38,568 | INFO     | --------------------------------------------------
[2026-01-08 21:17:15] 2026-01-09 02:16:38,568 | INFO     | 
[2026-01-08 21:17:15] 2026-01-09 02:16:38,568 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 21:17:15] 2026-01-09 02:16:38,591 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,591 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,592 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,592 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,594 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:17:15] 2026-01-09 02:16:38,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,594 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:17:15] 2026-01-09 02:16:38,594 | INFO     | job 6963146420 has completed (purged errors)
[2026-01-08 21:17:15] 2026-01-09 02:16:38,594 | INFO     | overall cleanup function is called
[2026-01-08 21:17:15] 2026-01-09 02:16:39,602 | INFO     | --- collectZombieJob: --- 10, [15191]
[2026-01-08 21:17:15] 2026-01-09 02:16:39,602 | INFO     | zombie collector waiting for pid 15191
[2026-01-08 21:17:15] 2026-01-09 02:16:39,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:17:15] 2026-01-09 02:16:39,613 | INFO     | collected zombie processes
[2026-01-08 21:17:15] 2026-01-09 02:16:39,613 | INFO     | will attempt to kill all subprocesses of pid=15191
[2026-01-08 21:17:15] 2026-01-09 02:16:39,699 | INFO     | process IDs to be killed: [15191] (in reverse order)
[2026-01-08 21:17:15] 2026-01-09 02:16:39,748 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:17:15] 2026-01-09 02:16:39,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:17:15] 2026-01-09 02:16:39,752 | INFO     | did not find any defunct processes belonging to 15191
[2026-01-08 21:17:15] 2026-01-09 02:16:39,755 | INFO     | did not find any defunct processes belonging to 15191
[2026-01-08 21:17:15] 2026-01-09 02:16:39,755 | INFO     | ready for new job
[2026-01-08 21:17:15] 2026-01-09 02:16:39,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:17:15] 2026-01-09 02:16:39,756 | INFO     | ***************************************
[2026-01-08 21:17:15] 2026-01-09 02:16:39,756 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:17:15] 2026-01-09 02:16:39,756 | INFO     | ***************************************
[2026-01-08 21:17:15] 2026-01-09 02:16:39,756 | INFO     | 
[2026-01-08 21:17:15] 2026-01-09 02:16:39,757 | INFO     | architecture information:
[2026-01-08 21:17:15] 2026-01-09 02:16:39,757 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:17:15] 2026-01-09 02:16:39,771 | INFO     | cat /etc/os-release:
[2026-01-08 21:17:15] NAME="CentOS Linux"
[2026-01-08 21:17:15] VERSION="7 (Core)"
[2026-01-08 21:17:15] ID="centos"
[2026-01-08 21:17:15] ID_LIKE="rhel fedora"
[2026-01-08 21:17:15] VERSION_ID="7"
[2026-01-08 21:17:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:17:15] ANSI_COLOR="0;31"
[2026-01-08 21:17:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:17:15] HOME_URL="https://www.centos.org/"
[2026-01-08 21:17:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:17:15] 
[2026-01-08 21:17:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:17:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:17:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:17:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:17:15] 
[2026-01-08 21:17:15] 2026-01-09 02:16:39,771 | INFO     | ***************************************
[2026-01-08 21:17:15] 2026-01-09 02:16:40,274 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 21:17:15] 2026-01-09 02:16:40,289 | INFO     | sufficient remaining disk space (18656264192 B)
[2026-01-08 21:17:15] 2026-01-09 02:16:40,290 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:17:15] 2026-01-09 02:16:40,290 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:17:15] 2026-01-09 02:16:40,290 | INFO     | update_server=False
[2026-01-08 21:17:15] 2026-01-09 02:16:40,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:17:15] 2026-01-09 02:16:40,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:17:15] 2026-01-09 02:16:40,543 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 21:17:15] 2026-01-09 02:16:40,543 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 21:17:15] 2026-01-09 02:16:40,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:17:15] 2026-01-09 02:16:40,543 | INFO     | will abort loop
[2026-01-08 21:17:15] 2026-01-09 02:16:40,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:17:15] 2026-01-09 02:16:41,018 | INFO     | all job control threads have been joined
[2026-01-08 21:17:15] 2026-01-09 02:16:41,091 | INFO     | all data control threads have been joined
[2026-01-08 21:17:15] 2026-01-09 02:16:41,296 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:41,296 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:41,549 | INFO     | all payload control threads have been joined
[2026-01-08 21:17:15] 2026-01-09 02:16:41,549 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:41,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:17:15] 2026-01-09 02:16:41,808 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:41,860 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:41,876 | INFO     | [job] validate thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:41,925 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:42,023 | INFO     | [job] control thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:42,096 | INFO     | [data] control thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:42,390 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:42,442 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:42,463 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:42,554 | INFO     | [payload] control thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:42,793 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:45,754 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:16:50,920 | INFO     | job.realtimelogging is not enabled
[2026-01-08 21:17:15] 2026-01-09 02:16:51,925 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:17:15] 2026-01-09 02:17:08,669 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:17:15] 2026-01-09 02:17:10,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462882228032)>', '<ExcThread(monitor, started 140461872248576)>']
[2026-01-08 21:17:15] 2026-01-09 02:17:10,298 | INFO     | PID=8674 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 21:17:15] 2026-01-09 02:17:10,298 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:17:15] 2026-01-09 02:17:10,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:17:15] 2026-01-09 02:17:10,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:17:15] 2026-01-09 02:17:10,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:17:15] 2026-01-09 02:17:10,299 | INFO     | [monitor] control thread has ended
[2026-01-08 21:17:15] 2026-01-09 02:17:15,169 | INFO     | all workflow threads have been joined
[2026-01-08 21:17:15] 2026-01-09 02:17:15,169 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:17:15] 2026-01-09 02:17:15,169 | INFO     | traces error code: 0
[2026-01-08 21:17:15] 2026-01-09 02:17:15,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:17:15] 2026-01-09 02:17:15,255 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:17:15] 2026-01-09 02:17:15,259 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:17:15] 2026-01-09 02:17:15,263 [wrapper] pilotpid: 8674
[2026-01-08 21:17:15] 2026-01-09 02:17:15,267 [wrapper] Pilot exit status: 0
[2026-01-08 21:17:15] 2026-01-09 02:17:15,282 [wrapper] pandaids: 6963146420
[2026-01-08 21:17:15] 2026-01-09 02:17:15,320 [wrapper] cleanup supervisor_pilot 27795 8675
[2026-01-08 21:17:15] 2026-01-09 02:17:15,324 [wrapper] Test setup, not cleaning
[2026-01-08 21:17:15] 2026-01-09 02:17:15,328 [wrapper] apfmon messages muted
[2026-01-08 21:17:15] 2026-01-09 02:17:15,332 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:17:15] 2026-01-09 02:17:15,336 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:17:15]  *** Error codes and diagnostics ***
[2026-01-08 21:17:15]     "exeErrorCode": 0,
[2026-01-08 21:17:15]     "exeErrorDiag": "",
[2026-01-08 21:17:15]     "pilotErrorCode": 0,
[2026-01-08 21:17:15]     "pilotErrorDiag": "",
[2026-01-08 21:17:15]  *** Listing of results directory ***
[2026-01-08 21:17:15] total 439972
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-08 21:17:15] -rwx------ 1 boincer umatlas     36322 Jan  8 10:03 runpilot2-wrapper.sh
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 10:04 queuedata.json
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas       100 Jan  8 19:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:17:15] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 19:41 run_atlas
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas       105 Jan  8 19:41 job.xml
[2026-01-08 21:17:15] -rw-r--r-- 2 boincer umatlas 223697890 Jan  8 19:41 EVNT.47898824._001057.pool.root.1
[2026-01-08 21:17:15] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 19:41 start_atlas.sh
[2026-01-08 21:17:15] drwxrwx--x 2 boincer umatlas      4096 Jan  8 19:41 shared
[2026-01-08 21:17:15] -rw-r--r-- 2 boincer umatlas    592394 Jan  8 19:41 input.tar.gz
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas         0 Jan  8 19:41 boinc_lockfile
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas      2518 Jan  8 19:41 pandaJob.out
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas        57 Jan  8 19:41 setup.sh.local
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas    989837 Jan  8 19:41 agis_schedconf.cvmfs.json
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas   1516240 Jan  8 19:41 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:17:15] drwx------ 5 boincer umatlas      4096 Jan  8 19:42 pilot3
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas      5952 Jan  8 21:09 init_data.xml
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas 220509281 Jan  8 21:15 HITS.47898826._026800.pool.root.1
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas       530 Jan  8 21:16 boinc_task_state.xml
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas        95 Jan  8 21:16 pilot_heartbeat.json
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas      1047 Jan  8 21:16 memory_monitor_summary.json
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas    389869 Jan  8 21:16 log.47898826._026800.job.log.tgz.1
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas      7865 Jan  8 21:16 heartbeat.json
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas        27 Jan  8 21:16 wrapper_checkpoint.txt
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 21:16 boinc_mmap_file
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas      5003 Jan  8 21:17 pilotlog.txt
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas    811851 Jan  8 21:17 log.47898826._026800.job.log.1
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas       357 Jan  8 21:17 output.list
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas       620 Jan  8 21:17 runtime_log
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas   1218560 Jan  8 21:17 result.tar.gz
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas      9344 Jan  8 21:17 runtime_log.err
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas       659 Jan  8 21:17 kqqLDmFj6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXTfKDmb5wc9n.diag
[2026-01-08 21:17:15] -rw-r--r-- 1 boincer umatlas     22124 Jan  8 21:17 stderr.txt
[2026-01-08 21:17:15] HITS file was successfully produced:
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas 220509281 Jan  8 21:15 shared/HITS.pool.root.1
[2026-01-08 21:17:15]  *** Contents of shared directory: ***
[2026-01-08 21:17:15] total 435596
[2026-01-08 21:17:15] -rw-r--r-- 2 boincer umatlas 223697890 Jan  8 19:41 ATLAS.root_0
[2026-01-08 21:17:15] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 19:41 start_atlas.sh
[2026-01-08 21:17:15] -rw-r--r-- 2 boincer umatlas    592394 Jan  8 19:41 input.tar.gz
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas 220509281 Jan  8 21:15 HITS.pool.root.1
[2026-01-08 21:17:15] -rw------- 1 boincer umatlas   1218560 Jan  8 21:17 result.tar.gz
21:17:16 (4983): run_atlas exited; CPU time 62523.536842
21:17:16 (4983): called boinc_finish(0)

</stderr_txt>
]]>

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