Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:03:17 (3564727): wrapper (7.7.26015): starting
23:03:17 (3564727): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:03:17] Arguments: --nthreads 8
[2026-01-08 23:03:17] Threads: 8
[2026-01-08 23:03:17] Checking for CVMFS
[2026-01-08 23:03:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:03:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:03:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:03:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:03:18] 2.13.3.0 13693 92903 355128 154929 0 146 25379657 40960001 9189 16776704 0 228374398 99.549 276157702 37842 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 23:03:18] CVMFS is ok
[2026-01-08 23:03:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:03:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:03:18] Further information can be found at the LHC@home message board.
[2026-01-08 23:03:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:03:18] Checking for apptainer binary...
[2026-01-08 23:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:03:19] Running /usr/bin/apptainer --version
[2026-01-08 23:03:19] apptainer version 1.4.5-2.el9
[2026-01-08 23:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:03:19] c6-5-37-3.aglt2.org
[2026-01-08 23:03:19] apptainer works
[2026-01-08 23:03:20] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:03:20] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:03:20] Starting ATLAS job with PandaID=6963156197
[2026-01-08 23:03:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:44:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:44:11] 2026-01-09 11:42:59,814 | INFO     | monitor loop #1653: job 0:6963156197 is in state 'finished'
[2026-01-09 06:44:11] 2026-01-09 11:42:59,814 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:44:11] 2026-01-09 11:43:00,055 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 06:44:11] 2026-01-09 11:43:00,097 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3050.9978750000005
[2026-01-09 06:44:11] 2026-01-09 11:43:00,168 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963156197/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:44:11] 2026-01-09 11:43:00,169 | INFO     | extracted standard info from prmon json
[2026-01-09 06:44:11] 2026-01-09 11:43:00,169 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:44:11] 2026-01-09 11:43:00,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:44:11] 2026-01-09 11:43:00,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:44:11] 2026-01-09 11:43:00,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:44:11] 2026-01-09 11:43:00,221 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:44:11] 2026-01-09 11:43:00,222 | INFO     | sum of square deviations: 28067958090.899982
[2026-01-09 06:44:11] 2026-01-09 11:43:00,238 | INFO     | sum of deviations: 87089988146.04019
[2026-01-09 06:44:11] 2026-01-09 11:43:00,239 | INFO     | mean x: 1767945232.7884188
[2026-01-09 06:44:11] 2026-01-09 11:43:00,239 | INFO     | mean y: 2493874.084632517
[2026-01-09 06:44:11] 2026-01-09 11:43:00,239 | INFO     | intersect: -5483132435.736279
[2026-01-09 06:44:11] 2026-01-09 11:43:00,239 | INFO     | chi2: 3.806682490529759
[2026-01-09 06:44:11] 2026-01-09 11:43:00,240 | INFO     | sum of square deviations: 27140638158.67326
[2026-01-09 06:44:11] 2026-01-09 11:43:00,312 | INFO     | sum of deviations: 146740557378.41208
[2026-01-09 06:44:11] 2026-01-09 11:43:00,313 | INFO     | mean x: 1767945080.286036
[2026-01-09 06:44:11] 2026-01-09 11:43:00,313 | INFO     | mean y: 2503618.114864865
[2026-01-09 06:44:11] 2026-01-09 11:43:00,313 | INFO     | intersect: -9556197433.013123
[2026-01-09 06:44:11] 2026-01-09 11:43:00,322 | INFO     | chi2: 2.2106714268371777
[2026-01-09 06:44:11] 2026-01-09 11:43:00,322 | INFO     | current chi2=2.2106714268371777 (change=41.92656118977949 %)
[2026-01-09 06:44:11] 2026-01-09 11:43:00,323 | INFO     | sum of square deviations: 26233942451.006836
[2026-01-09 06:44:11] 2026-01-09 11:43:00,341 | INFO     | sum of deviations: 144702525760.52142
[2026-01-09 06:44:11] 2026-01-09 11:43:00,341 | INFO     | mean x: 1767944927.7813213
[2026-01-09 06:44:11] 2026-01-09 11:43:00,341 | INFO     | mean y: 2503275.3075170843
[2026-01-09 06:44:11] 2026-01-09 11:43:00,341 | INFO     | intersect: -9749218065.593779
[2026-01-09 06:44:11] 2026-01-09 11:43:00,342 | INFO     | chi2: 2.2107959449779484
[2026-01-09 06:44:11] 2026-01-09 11:43:00,342 | INFO     | current chi2=2.2107959449779484 (change=-0.005632593756770775 %)
[2026-01-09 06:44:11] 2026-01-09 11:43:00,342 | INFO     | right removable region: 438
[2026-01-09 06:44:11] 2026-01-09 11:43:00,342 | INFO     | sum of square deviations: 27140613091.936775
[2026-01-09 06:44:11] 2026-01-09 11:43:00,358 | INFO     | sum of deviations: -12233138842.846851
[2026-01-09 06:44:11] 2026-01-09 11:43:00,359 | INFO     | mean x: 1767945385.2927928
[2026-01-09 06:44:11] 2026-01-09 11:43:00,359 | INFO     | mean y: 2510158.3603603602
[2026-01-09 06:44:11] 2026-01-09 11:43:00,359 | INFO     | intersect: 799379458.6814516
[2026-01-09 06:44:11] 2026-01-09 11:43:00,360 | INFO     | chi2: 1.7069247389738114
[2026-01-09 06:44:11] 2026-01-09 11:43:00,360 | INFO     | current chi2=1.7069247389738114 (change=55.15978169389519 %)
[2026-01-09 06:44:11] 2026-01-09 11:43:00,360 | INFO     | sum of square deviations: 26233865473.7586
[2026-01-09 06:44:11] 2026-01-09 11:43:00,376 | INFO     | sum of deviations: -16999963488.487473
[2026-01-09 06:44:11] 2026-01-09 11:43:00,376 | INFO     | mean x: 1767945537.8018224
[2026-01-09 06:44:11] 2026-01-09 11:43:00,377 | INFO     | mean y: 2510952.1093394076
[2026-01-09 06:44:11] 2026-01-09 11:43:00,377 | INFO     | intersect: 1148167874.9264886
[2026-01-09 06:44:11] 2026-01-09 11:43:00,389 | INFO     | chi2: 1.6938019499208532
[2026-01-09 06:44:11] 2026-01-09 11:43:00,390 | INFO     | current chi2=1.6938019499208532 (change=0.7687971679903984 %)
[2026-01-09 06:44:11] 2026-01-09 11:43:00,390 | INFO     | left removable region: 20
[2026-01-09 06:44:11] 2026-01-09 11:43:00,390 | INFO     | sum of square deviations: 22646107668.413868
[2026-01-09 06:44:11] 2026-01-09 11:43:00,406 | INFO     | sum of deviations: 21287966684.327747
[2026-01-09 06:44:11] 2026-01-09 11:43:00,406 | INFO     | mean x: 1767945507.3038278
[2026-01-09 06:44:11] 2026-01-09 11:43:00,406 | INFO     | mean y: 2524601.1076555024
[2026-01-09 06:44:11] 2026-01-09 11:43:00,407 | INFO     | intersect: -1659393005.673149
[2026-01-09 06:44:11] 2026-01-09 11:43:00,407 | INFO     | chi2: 0.0031280695459827814
[2026-01-09 06:44:11] 2026-01-09 11:43:00,408 | INFO     | current memory leak: 0.94 B/s (using 418 data points, chi2=0.00)
[2026-01-09 06:44:11] 2026-01-09 11:43:00,409 | INFO     | could have reported an average CPU frequency of 3069 MHz (18 samples)
[2026-01-09 06:44:11] 2026-01-09 11:43:00,409 | INFO     | ..............................
[2026-01-09 06:44:11] 2026-01-09 11:43:00,409 | INFO     | . Timing measurements:
[2026-01-09 06:44:11] 2026-01-09 11:43:00,410 | INFO     | . get job = 0 s
[2026-01-09 06:44:11] 2026-01-09 11:43:00,410 | INFO     | . initial setup = 5 s
[2026-01-09 06:44:11] 2026-01-09 11:43:00,410 | INFO     | . payload setup = 34 s
[2026-01-09 06:44:11] 2026-01-09 11:43:00,410 | INFO     | . stage-in = 0 s
[2026-01-09 06:44:11] 2026-01-09 11:43:00,410 | INFO     | . payload execution = 27392 s
[2026-01-09 06:44:11] 2026-01-09 11:43:00,410 | INFO     | . stage-out = 6 s
[2026-01-09 06:44:11] 2026-01-09 11:43:00,410 | INFO     | . log creation = 0 s
[2026-01-09 06:44:11] 2026-01-09 11:43:00,410 | INFO     | ..............................
[2026-01-09 06:44:11] 2026-01-09 11:43:01,097 | INFO     | 
[2026-01-09 06:44:11] 2026-01-09 11:43:01,098 | INFO     | job summary report
[2026-01-09 06:44:11] 2026-01-09 11:43:01,098 | INFO     | --------------------------------------------------
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | PanDA job id: 6963156197
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | task id: 47898826
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | errors: (none)
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | pilot state: finished 
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | transexitcode: 0
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | exeerrorcode: 0
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | exeerrordiag: 
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | exitcode: 0
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | exitmsg: OK
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | cpuconsumptiontime: 53109 s
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | nevents: 400
[2026-01-09 06:44:11] 2026-01-09 11:43:01,099 | INFO     | neventsw: 0
[2026-01-09 06:44:11] 2026-01-09 11:43:01,100 | INFO     | pid: 3578920
[2026-01-09 06:44:11] 2026-01-09 11:43:01,100 | INFO     | pgrp: 3578920
[2026-01-09 06:44:11] 2026-01-09 11:43:01,100 | INFO     | corecount: 8
[2026-01-09 06:44:11] 2026-01-09 11:43:01,100 | INFO     | event service: False
[2026-01-09 06:44:11] 2026-01-09 11:43:01,100 | INFO     | sizes: {0: 2283135, 1: 2283991, 2: 2283991, 13: 2284019, 23: 2284337, 24: 2284365, 27431: 2320920, 27432: 2320919, 27438: 2329973, 27440: 2330029, 27477: 2330223}
[2026-01-09 06:44:11] 2026-01-09 11:43:01,100 | INFO     | --------------------------------------------------
[2026-01-09 06:44:11] 2026-01-09 11:43:01,101 | INFO     | 
[2026-01-09 06:44:11] 2026-01-09 11:43:01,101 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 06:44:11] 2026-01-09 11:43:01,372 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,386 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:44:11] 2026-01-09 11:43:01,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,387 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:44:11] 2026-01-09 11:43:01,387 | INFO     | job 6963156197 has completed (purged errors)
[2026-01-09 06:44:11] 2026-01-09 11:43:01,387 | INFO     | overall cleanup function is called
[2026-01-09 06:44:11] 2026-01-09 11:43:02,395 | INFO     | --- collectZombieJob: --- 10, [3578920]
[2026-01-09 06:44:11] 2026-01-09 11:43:02,395 | INFO     | zombie collector waiting for pid 3578920
[2026-01-09 06:44:11] 2026-01-09 11:43:02,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:44:11] 2026-01-09 11:43:02,396 | INFO     | collected zombie processes
[2026-01-09 06:44:11] 2026-01-09 11:43:02,396 | INFO     | will attempt to kill all subprocesses of pid=3578920
[2026-01-09 06:44:11] 2026-01-09 11:43:03,893 | INFO     | process IDs to be killed: [3578920] (in reverse order)
[2026-01-09 06:44:11] 2026-01-09 11:43:04,835 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:44:11] 2026-01-09 11:43:04,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:44:11] 2026-01-09 11:43:04,872 | INFO     | did not find any defunct processes belonging to 3578920
[2026-01-09 06:44:11] 2026-01-09 11:43:04,890 | INFO     | did not find any defunct processes belonging to 3578920
[2026-01-09 06:44:11] 2026-01-09 11:43:04,890 | INFO     | ready for new job
[2026-01-09 06:44:11] 2026-01-09 11:43:04,890 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:44:11] 2026-01-09 11:43:04,897 | INFO     | ***************************************
[2026-01-09 06:44:11] 2026-01-09 11:43:04,897 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:44:11] 2026-01-09 11:43:04,898 | INFO     | ***************************************
[2026-01-09 06:44:11] 2026-01-09 11:43:04,898 | INFO     | 
[2026-01-09 06:44:11] 2026-01-09 11:43:04,905 | INFO     | architecture information:
[2026-01-09 06:44:11] 2026-01-09 11:43:04,917 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:44:11] 2026-01-09 11:43:05,111 | INFO     | cat /etc/os-release:
[2026-01-09 06:44:11] NAME="CentOS Linux"
[2026-01-09 06:44:11] VERSION="7 (Core)"
[2026-01-09 06:44:11] ID="centos"
[2026-01-09 06:44:11] ID_LIKE="rhel fedora"
[2026-01-09 06:44:11] VERSION_ID="7"
[2026-01-09 06:44:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:44:11] ANSI_COLOR="0;31"
[2026-01-09 06:44:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:44:11] HOME_URL="https://www.centos.org/"
[2026-01-09 06:44:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:44:11] 
[2026-01-09 06:44:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:44:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:44:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:44:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:44:11] 
[2026-01-09 06:44:11] 2026-01-09 11:43:05,111 | INFO     | ***************************************
[2026-01-09 06:44:11] 2026-01-09 11:43:05,614 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 06:44:11] 2026-01-09 11:43:05,719 | INFO     | sufficient remaining disk space (74076651520 B)
[2026-01-09 06:44:11] 2026-01-09 11:43:05,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:44:11] 2026-01-09 11:43:05,719 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:44:11] 2026-01-09 11:43:05,719 | INFO     | update_server=False
[2026-01-09 06:44:11] 2026-01-09 11:43:05,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:44:11] 2026-01-09 11:43:05,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:44:11] 2026-01-09 11:43:05,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:44:11] 2026-01-09 11:43:05,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:44:11] 2026-01-09 11:43:05,836 | INFO     | aborting loop
[2026-01-09 06:44:11] 2026-01-09 11:43:05,868 | INFO     | all job control threads have been joined
[2026-01-09 06:44:11] 2026-01-09 11:43:06,083 | INFO     | all data control threads have been joined
[2026-01-09 06:44:11] 2026-01-09 11:43:06,570 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:44:11] 2026-01-09 11:43:06,576 | INFO     | all payload control threads have been joined
[2026-01-09 06:44:11] 2026-01-09 11:43:06,725 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:06,763 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:06,842 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:06,874 | INFO     | [job] control thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,043 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,090 | INFO     | [data] control thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,379 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,541 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,582 | INFO     | [payload] control thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,735 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,757 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,888 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,906 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,954 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:07,958 | INFO     | [job] validate thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:10,627 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:44:11] 2026-01-09 11:43:33,131 | INFO     | PID=3569310 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 06:44:11] 2026-01-09 11:43:33,132 | INFO     | .. there are 10 such processes running
[2026-01-09 06:44:11] 2026-01-09 11:43:33,133 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:44:11] 2026-01-09 11:43:33,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:44:11] 2026-01-09 11:43:33,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:44:11] 2026-01-09 11:44:05,428 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:44:11] 2026-01-09 11:44:05,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821491664704)>', '<ExcThread(monitor, started 139820705769216)>']
[2026-01-09 06:44:11] 2026-01-09 11:44:06,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:44:11] 2026-01-09 11:44:06,349 | INFO     | [monitor] control thread has ended
[2026-01-09 06:44:11] 2026-01-09 11:44:10,505 | INFO     | all workflow threads have been joined
[2026-01-09 06:44:11] 2026-01-09 11:44:10,505 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:44:11] 2026-01-09 11:44:10,506 | INFO     | traces error code: 0
[2026-01-09 06:44:11] 2026-01-09 11:44:10,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:44:11] 2026-01-09 11:44:10,852 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:44:11] 2026-01-09 11:44:10,919 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:44:11] 2026-01-09 11:44:10,928 [wrapper] pilotpid: 3569310
[2026-01-09 06:44:11] 2026-01-09 11:44:10,938 [wrapper] Pilot exit status: 0
[2026-01-09 06:44:11] 2026-01-09 11:44:11,056 [wrapper] pandaids: 6963156197
[2026-01-09 06:44:11] 2026-01-09 11:44:11,176 [wrapper] cleanup supervisor_pilot  337768 3569311
[2026-01-09 06:44:11] 2026-01-09 11:44:11,191 [wrapper] Test setup, not cleaning
[2026-01-09 06:44:11] 2026-01-09 11:44:11,233 [wrapper] apfmon messages muted
[2026-01-09 06:44:11] 2026-01-09 11:44:11,264 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:44:11] 2026-01-09 11:44:11,313 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:44:11]  *** Error codes and diagnostics ***
[2026-01-09 06:44:11]     "exeErrorCode": 0,
[2026-01-09 06:44:11]     "exeErrorDiag": "",
[2026-01-09 06:44:11]     "pilotErrorCode": 0,
[2026-01-09 06:44:11]     "pilotErrorDiag": "",
[2026-01-09 06:44:11]  *** Listing of results directory ***
[2026-01-09 06:44:11] total 442796
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 06:44:11] -rwx------. 1 boincer umatlas     36322 Jan  8 14:07 runpilot2-wrapper.sh
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:07 queuedata.json
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas       100 Jan  8 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:44:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 23:03 run_atlas
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas       105 Jan  8 23:03 job.xml
[2026-01-09 06:44:11] -rw-r--r--. 2 boincer umatlas 222437680 Jan  8 23:03 EVNT.47898824._000895.pool.root.1
[2026-01-09 06:44:11] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 23:03 start_atlas.sh
[2026-01-09 06:44:11] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 23:03 shared
[2026-01-09 06:44:11] -rw-r--r--. 2 boincer umatlas    592390 Jan  8 23:03 input.tar.gz
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas         0 Jan  8 23:03 boinc_lockfile
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas      2516 Jan  8 23:03 pandaJob.out
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas        57 Jan  8 23:03 setup.sh.local
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas    989771 Jan  8 23:04 agis_schedconf.cvmfs.json
[2026-01-09 06:44:11] drwx------. 5 boincer umatlas      4096 Jan  8 23:04 pilot3
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas      6843 Jan  9 06:39 init_data.xml
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas 219079459 Jan  9 06:40 HITS.47898826._031374.pool.root.1
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas       530 Jan  9 06:40 boinc_task_state.xml
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas      1035 Jan  9 06:42 memory_monitor_summary.json
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas   1516240 Jan  9 06:42 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas    599201 Jan  9 06:42 log.47898826._031374.job.log.tgz.1
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas      7807 Jan  9 06:43 heartbeat.json
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas        95 Jan  9 06:43 pilot_heartbeat.json
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 06:43 boinc_mmap_file
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas        28 Jan  9 06:43 wrapper_checkpoint.txt
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas      4824 Jan  9 06:44 pilotlog.txt
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas   3392148 Jan  9 06:44 log.47898826._031374.job.log.1
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas       357 Jan  9 06:44 output.list
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas       620 Jan  9 06:44 runtime_log
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas   4014080 Jan  9 06:44 result.tar.gz
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas      9348 Jan  9 06:44 runtime_log.err
[2026-01-09 06:44:11] -rw-------. 1 boincer umatlas       657 Jan  9 06:44 7hjNDmhWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgFlKDmgky4Nn.diag
[2026-01-09 06:44:11] -rw-r--r--. 1 boincer umatlas     21255 Jan  9 06:44 stderr.txt
[2026-01-09 06:44:12] HITS file was successfully produced:
[2026-01-09 06:44:12] -rw-------. 1 boincer umatlas 219079459 Jan  9 06:40 shared/HITS.pool.root.1
[2026-01-09 06:44:12]  *** Contents of shared directory: ***
[2026-01-09 06:44:12] total 435696
[2026-01-09 06:44:12] -rw-r--r--. 2 boincer umatlas 222437680 Jan  8 23:03 ATLAS.root_0
[2026-01-09 06:44:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 23:03 start_atlas.sh
[2026-01-09 06:44:12] -rw-r--r--. 2 boincer umatlas    592390 Jan  8 23:03 input.tar.gz
[2026-01-09 06:44:12] -rw-------. 1 boincer umatlas 219079459 Jan  9 06:40 HITS.pool.root.1
[2026-01-09 06:44:12] -rw-------. 1 boincer umatlas   4014080 Jan  9 06:44 result.tar.gz
06:44:13 (3564727): run_atlas exited; CPU time 53733.912329
06:44:13 (3564727): called boinc_finish(0)

</stderr_txt>
]]>

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