Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:31:45 (992655): wrapper (7.7.26015): starting
12:31:45 (992655): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 12:31:45] Arguments: --nthreads 3
[2026-01-09 12:31:45] Threads: 3
[2026-01-09 12:31:45] Checking for CVMFS
[2026-01-09 12:31:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:31:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:31:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:31:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:31:45] 2.9.2.0 474489 2181 88104 154942 3 57 16218282 36864000 0 130560 0 1403079 99.988 83756 3472 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 12:31:45] CVMFS is ok
[2026-01-09 12:31:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:31:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:31:45] Further information can be found at the LHC@home message board.
[2026-01-09 12:31:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:31:45] Checking for apptainer binary...
[2026-01-09 12:31:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:31:45] Running /usr/bin/apptainer --version
[2026-01-09 12:31:45] apptainer version 1.4.1-1.1
[2026-01-09 12:31:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:31:45] thA371
[2026-01-09 12:31:45] apptainer works
[2026-01-09 12:31:45] Set ATHENA_PROC_NUMBER=3
[2026-01-09 12:31:45] Set ATHENA_CORE_NUMBER=3
[2026-01-09 12:31:45] Starting ATLAS job with PandaID=6963155954
[2026-01-09 12:31:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:29:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:29:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:29:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:29:23] 
[2026-01-09 14:29:23] 2026-01-09 13:28:51,855 | INFO     | ***************************************
[2026-01-09 14:29:23] 2026-01-09 13:28:52,358 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 14:29:23] 2026-01-09 13:28:52,369 | INFO     | sufficient remaining disk space (344729845760 B)
[2026-01-09 14:29:23] 2026-01-09 13:28:52,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:29:23] 2026-01-09 13:28:52,369 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:29:23] 2026-01-09 13:28:52,370 | INFO     | update_server=False
[2026-01-09 14:29:23] 2026-01-09 13:28:52,370 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:29:23] 2026-01-09 13:28:52,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:29:23] 2026-01-09 13:28:52,852 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 14:29:23] 2026-01-09 13:28:52,852 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 14:29:23] 2026-01-09 13:28:52,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:29:23] 2026-01-09 13:28:52,853 | INFO     | will abort loop
[2026-01-09 14:29:23] 2026-01-09 13:28:53,048 | INFO     | all payload control threads have been joined
[2026-01-09 14:29:23] 2026-01-09 13:28:53,110 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:29:23] 2026-01-09 13:28:53,334 | INFO     | all data control threads have been joined
[2026-01-09 14:29:23] 2026-01-09 13:28:53,375 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:53,375 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:53,458 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:53,569 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:53,858 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:53,919 | INFO     | all job control threads have been joined
[2026-01-09 14:29:23] 2026-01-09 13:28:53,921 | INFO     | [job] validate thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:53,934 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:53,985 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:53,986 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:54,054 | INFO     | [payload] control thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:54,198 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:54,340 | INFO     | [data] control thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:54,839 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:54,924 | INFO     | [job] control thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:55,116 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:28:55,636 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:29:23] 2026-01-09 13:28:59,027 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:29:23] 2026-01-09 13:28:59,643 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:29:23] 2026-01-09 13:29:00,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757590730560)>', '<ExcThread(monitor, started 139757308839680)>']
[2026-01-09 14:29:23] 2026-01-09 13:29:05,116 | INFO     | all workflow threads have been joined
[2026-01-09 14:29:23] 2026-01-09 13:29:05,117 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:29:23] 2026-01-09 13:29:05,117 | INFO     | traces error code: 0
[2026-01-09 14:29:23] 2026-01-09 13:29:05,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:29:23] 2026-01-09 13:29:23,433 | INFO     | PID=996379 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 14:29:23] 2026-01-09 13:29:23,433 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:29:23] 2026-01-09 13:29:23,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:29:23] 2026-01-09 13:29:23,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:29:23] 2026-01-09 13:29:23,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:29:23] 2026-01-09 13:29:23,433 | INFO     | [monitor] control thread has ended
[2026-01-09 14:29:23] 2026-01-09 13:29:23,479 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:29:23] 2026-01-09 13:29:23,482 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:29:23] 2026-01-09 13:29:23,484 [wrapper] pilotpid: 996379
[2026-01-09 14:29:23] 2026-01-09 13:29:23,487 [wrapper] Pilot exit status: 0
[2026-01-09 14:29:23] 2026-01-09 13:29:23,494 [wrapper] pandaids: 6963155954
[2026-01-09 14:29:23] 2026-01-09 13:29:23,510 [wrapper] cleanup supervisor_pilot 1018568 996380
[2026-01-09 14:29:23] 2026-01-09 13:29:23,512 [wrapper] Test setup, not cleaning
[2026-01-09 14:29:23] 2026-01-09 13:29:23,514 [wrapper] apfmon messages muted
[2026-01-09 14:29:23] 2026-01-09 13:29:23,516 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:29:23] 2026-01-09 13:29:23,519 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:29:23]  *** Error codes and diagnostics ***
[2026-01-09 14:29:23]     "exeErrorCode": 0,
[2026-01-09 14:29:23]     "exeErrorDiag": "",
[2026-01-09 14:29:23]     "pilotErrorCode": 0,
[2026-01-09 14:29:23]     "pilotErrorDiag": "",
[2026-01-09 14:29:23]  *** Listing of results directory ***
[2026-01-09 14:29:23] total 444936
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 14:29:23] -rwx------ 1 boinc boinc     36322 Jan  8 20:06 runpilot2-wrapper.sh
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:07 queuedata.json
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc       100 Jan  9 12:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:29:23] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 12:31 run_atlas
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc       105 Jan  9 12:31 job.xml
[2026-01-09 14:29:23] -rw-r--r-- 2 boinc boinc 223787388 Jan  9 12:31 EVNT.47898824._000887.pool.root.1
[2026-01-09 14:29:23] -rw-r--r-- 2 boinc boinc    592388 Jan  9 12:31 input.tar.gz
[2026-01-09 14:29:23] -rw-r--r-- 2 boinc boinc     15847 Jan  9 12:31 start_atlas.sh
[2026-01-09 14:29:23] drwxrwx--x 2 boinc boinc      4096 Jan  9 12:31 shared
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc         0 Jan  9 12:31 boinc_setup_complete
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc      6439 Jan  9 12:31 init_data.xml
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc         0 Jan  9 12:31 boinc_lockfile
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc      2518 Jan  9 12:31 pandaJob.out
[2026-01-09 14:29:23] -rw------- 1 boinc boinc    989377 Jan  9 12:31 agis_schedconf.cvmfs.json
[2026-01-09 14:29:23] -rw------- 1 boinc boinc   1516240 Jan  9 12:31 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:29:23] drwx------ 5 boinc boinc      4096 Jan  9 12:31 pilot3
[2026-01-09 14:29:23] -rw------- 1 boinc boinc 225366339 Jan  9 14:28 HITS.47898826._031175.pool.root.1
[2026-01-09 14:29:23] -rw------- 1 boinc boinc        95 Jan  9 14:28 pilot_heartbeat.json
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc       529 Jan  9 14:28 boinc_task_state.xml
[2026-01-09 14:29:23] -rw------- 1 boinc boinc      1030 Jan  9 14:28 memory_monitor_summary.json
[2026-01-09 14:29:23] -rw------- 1 boinc boinc    270336 Jan  9 14:28 log.47898826._031175.job.log.tgz.1
[2026-01-09 14:29:23] -rw------- 1 boinc boinc      7758 Jan  9 14:28 heartbeat.json
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc        27 Jan  9 14:29 wrapper_checkpoint.txt
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc      8192 Jan  9 14:29 boinc_mmap_file
[2026-01-09 14:29:23] -rw------- 1 boinc boinc       746 Jan  9 14:29 pilotlog.txt
[2026-01-09 14:29:23] -rw------- 1 boinc boinc   1010220 Jan  9 14:29 log.47898826._031175.job.log.1
[2026-01-09 14:29:23] -rw------- 1 boinc boinc       357 Jan  9 14:29 output.list
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc       620 Jan  9 14:29 runtime_log
[2026-01-09 14:29:23] -rw------- 1 boinc boinc   1300480 Jan  9 14:29 result.tar.gz
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc      8897 Jan  9 14:29 runtime_log.err
[2026-01-09 14:29:23] -rw------- 1 boinc boinc       659 Jan  9 14:29 9mfNDmYWAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmd0fKDmWJANXm.diag
[2026-01-09 14:29:23] -rw-r--r-- 1 boinc boinc      8320 Jan  9 14:29 stderr.txt
[2026-01-09 14:29:23] HITS file was successfully produced:
[2026-01-09 14:29:23] -rw------- 1 boinc boinc 225366339 Jan  9 14:28 shared/HITS.pool.root.1
[2026-01-09 14:29:23]  *** Contents of shared directory: ***
[2026-01-09 14:29:23] total 440508
[2026-01-09 14:29:23] -rw-r--r-- 2 boinc boinc 223787388 Jan  9 12:31 ATLAS.root_0
[2026-01-09 14:29:23] -rw-r--r-- 2 boinc boinc    592388 Jan  9 12:31 input.tar.gz
[2026-01-09 14:29:23] -rw-r--r-- 2 boinc boinc     15847 Jan  9 12:31 start_atlas.sh
[2026-01-09 14:29:23] -rw------- 1 boinc boinc 225366339 Jan  9 14:28 HITS.pool.root.1
[2026-01-09 14:29:23] -rw------- 1 boinc boinc   1300480 Jan  9 14:29 result.tar.gz
14:29:24 (992655): run_atlas exited; CPU time 20358.020519
14:29:24 (992655): called boinc_finish(0)

</stderr_txt>
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