Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:58:28 (3284376): wrapper (7.7.26015): starting
20:58:28 (3284376): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 20:58:28] Arguments: --nthreads 8
[2026-01-08 20:58:28] Threads: 8
[2026-01-08 20:58:28] Checking for CVMFS
[2026-01-08 20:58:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:58:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:58:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:58:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:58:30] 2.13.3.0 5782 20132 190136 154926 3 391 32054198 40960001 12159 16776704 0 21716302 99.679 16531454 39584 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 20:58:30] CVMFS is ok
[2026-01-08 20:58:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:58:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:58:30] Further information can be found at the LHC@home message board.
[2026-01-08 20:58:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:58:30] Checking for apptainer binary...
[2026-01-08 20:58:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:58:30] Running /usr/bin/apptainer --version
[2026-01-08 20:58:31] apptainer version 1.4.5-2.el9
[2026-01-08 20:58:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:58:31] c-206-39.aglt2.org
[2026-01-08 20:58:31] apptainer works
[2026-01-08 20:58:31] Set ATHENA_PROC_NUMBER=8
[2026-01-08 20:58:31] Set ATHENA_CORE_NUMBER=8
[2026-01-08 20:58:32] Starting ATLAS job with PandaID=6963077472
[2026-01-08 20:58:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:52:14]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:52:14] 2026-01-09 08:51:12,712 | INFO     | monitor loop #1567: job 0:6963077472 is in state 'finished'
[2026-01-09 03:52:14] 2026-01-09 08:51:12,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:52:14] 2026-01-09 08:51:14,283 | INFO     | time since job start (24712s) is within the limit (174528.0s)
[2026-01-09 03:52:14] 2026-01-09 08:51:15,217 | INFO     | monitor loop #1568: job 0:6963077472 is in state 'finished'
[2026-01-09 03:52:14] 2026-01-09 08:51:15,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:52:14] 2026-01-09 08:51:16,290 | INFO     | time since job start (24714s) is within the limit (174528.0s)
[2026-01-09 03:52:14] 2026-01-09 08:51:17,722 | INFO     | monitor loop #1569: job 0:6963077472 is in state 'finished'
[2026-01-09 03:52:14] 2026-01-09 08:51:17,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,304 | INFO     | time since job start (24716s) is within the limit (174528.0s)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,658 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 03:52:14] 2026-01-09 08:51:18,665 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3252.5030468749987
[2026-01-09 03:52:14] 2026-01-09 08:51:18,722 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963077472/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,723 | INFO     | extracted standard info from prmon json
[2026-01-09 03:52:14] 2026-01-09 08:51:18,723 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 03:52:14] 2026-01-09 08:51:18,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 03:52:14] 2026-01-09 08:51:18,727 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 03:52:14] 2026-01-09 08:51:18,727 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 03:52:14] 2026-01-09 08:51:18,736 | INFO     | fitting pss+swap vs Time
[2026-01-09 03:52:14] 2026-01-09 08:51:18,737 | INFO     | sum of square deviations: 20298212603.707104
[2026-01-09 03:52:14] 2026-01-09 08:51:18,740 | INFO     | sum of deviations: 54015840229.67747
[2026-01-09 03:52:14] 2026-01-09 08:51:18,740 | INFO     | mean x: 1767936313.5508685
[2026-01-09 03:52:14] 2026-01-09 08:51:18,740 | INFO     | mean y: 2504900.064516129
[2026-01-09 03:52:14] 2026-01-09 08:51:18,741 | INFO     | intersect: -4702173650.379277
[2026-01-09 03:52:14] 2026-01-09 08:51:18,741 | INFO     | chi2: 2.746437177746347
[2026-01-09 03:52:14] 2026-01-09 08:51:18,741 | INFO     | sum of square deviations: 19552112662.092987
[2026-01-09 03:52:14] 2026-01-09 08:51:18,744 | INFO     | sum of deviations: 78161034314.77132
[2026-01-09 03:52:14] 2026-01-09 08:51:18,744 | INFO     | mean x: 1767936161.0477388
[2026-01-09 03:52:14] 2026-01-09 08:51:18,745 | INFO     | mean y: 2509784.8015075377
[2026-01-09 03:52:14] 2026-01-09 08:51:18,745 | INFO     | intersect: -7064947391.72569
[2026-01-09 03:52:14] 2026-01-09 08:51:18,745 | INFO     | chi2: 2.06480212663052
[2026-01-09 03:52:14] 2026-01-09 08:51:18,745 | INFO     | current chi2=2.06480212663052 (change=24.818883775639776 %)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,745 | INFO     | right removable region: 397
[2026-01-09 03:52:14] 2026-01-09 08:51:18,745 | INFO     | sum of square deviations: 19551952164.030136
[2026-01-09 03:52:14] 2026-01-09 08:51:18,748 | INFO     | sum of deviations: -30943442082.763824
[2026-01-09 03:52:14] 2026-01-09 08:51:18,749 | INFO     | mean x: 1767936466.0703518
[2026-01-09 03:52:14] 2026-01-09 08:51:18,749 | INFO     | mean y: 2522200.3844221104
[2026-01-09 03:52:14] 2026-01-09 08:51:18,749 | INFO     | intersect: 2800505705.299966
[2026-01-09 03:52:14] 2026-01-09 08:51:18,749 | INFO     | chi2: 0.7647217963893007
[2026-01-09 03:52:14] 2026-01-09 08:51:18,749 | INFO     | current chi2=0.7647217963893007 (change=72.15586059693486 %)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,750 | INFO     | sum of square deviations: 18824203699.043255
[2026-01-09 03:52:14] 2026-01-09 08:51:18,752 | INFO     | sum of deviations: -35987213454.98729
[2026-01-09 03:52:14] 2026-01-09 08:51:18,752 | INFO     | mean x: 1767936618.5903308
[2026-01-09 03:52:14] 2026-01-09 08:51:18,753 | INFO     | mean y: 2523247.055979644
[2026-01-09 03:52:14] 2026-01-09 08:51:18,753 | INFO     | intersect: 3382380025.344686
[2026-01-09 03:52:14] 2026-01-09 08:51:18,753 | INFO     | chi2: 0.7466833252750595
[2026-01-09 03:52:14] 2026-01-09 08:51:18,753 | INFO     | current chi2=0.7466833252750595 (change=2.3588279030899018 %)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,753 | INFO     | left removable region: 20
[2026-01-09 03:52:14] 2026-01-09 08:51:18,754 | INFO     | sum of square deviations: 16617371043.75066
[2026-01-09 03:52:14] 2026-01-09 08:51:18,756 | INFO     | sum of deviations: -2294123277.1671104
[2026-01-09 03:52:14] 2026-01-09 08:51:18,756 | INFO     | mean x: 1767936740.6312997
[2026-01-09 03:52:14] 2026-01-09 08:51:18,756 | INFO     | mean y: 2526525.9124668436
[2026-01-09 03:52:14] 2026-01-09 08:51:18,756 | INFO     | intersect: 246600321.8554489
[2026-01-09 03:52:14] 2026-01-09 08:51:18,757 | INFO     | chi2: 0.003095330495232326
[2026-01-09 03:52:14] 2026-01-09 08:51:18,757 | INFO     | current memory leak: -0.14 B/s (using 377 data points, chi2=0.00)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,757 | INFO     | could have reported an average CPU frequency of 3242 MHz (17 samples)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,758 | INFO     | ..............................
[2026-01-09 03:52:14] 2026-01-09 08:51:18,758 | INFO     | . Timing measurements:
[2026-01-09 03:52:14] 2026-01-09 08:51:18,758 | INFO     | . get job = 0 s
[2026-01-09 03:52:14] 2026-01-09 08:51:18,758 | INFO     | . initial setup = 2 s
[2026-01-09 03:52:14] 2026-01-09 08:51:18,758 | INFO     | . payload setup = 28 s
[2026-01-09 03:52:14] 2026-01-09 08:51:18,758 | INFO     | . stage-in = 0 s
[2026-01-09 03:52:14] 2026-01-09 08:51:18,758 | INFO     | . payload execution = 24568 s
[2026-01-09 03:52:14] 2026-01-09 08:51:18,758 | INFO     | . stage-out = 7 s
[2026-01-09 03:52:14] 2026-01-09 08:51:18,758 | INFO     | . log creation = 2 s
[2026-01-09 03:52:14] 2026-01-09 08:51:18,758 | INFO     | ..............................
[2026-01-09 03:52:14] 2026-01-09 08:51:18,836 | INFO     | 
[2026-01-09 03:52:14] 2026-01-09 08:51:18,837 | INFO     | job summary report
[2026-01-09 03:52:14] 2026-01-09 08:51:18,837 | INFO     | --------------------------------------------------
[2026-01-09 03:52:14] 2026-01-09 08:51:18,837 | INFO     | PanDA job id: 6963077472
[2026-01-09 03:52:14] 2026-01-09 08:51:18,837 | INFO     | task id: 47898826
[2026-01-09 03:52:14] 2026-01-09 08:51:18,837 | INFO     | errors: (none)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,837 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:52:14] 2026-01-09 08:51:18,837 | INFO     | pilot state: finished 
[2026-01-09 03:52:14] 2026-01-09 08:51:18,837 | INFO     | transexitcode: 0
[2026-01-09 03:52:14] 2026-01-09 08:51:18,837 | INFO     | exeerrorcode: 0
[2026-01-09 03:52:14] 2026-01-09 08:51:18,837 | INFO     | exeerrordiag: 
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | exitcode: 0
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | exitmsg: OK
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | cpuconsumptiontime: 45826 s
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | nevents: 400
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | neventsw: 0
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | pid: 3299389
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | pgrp: 3299389
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | corecount: 8
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | event service: False
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | sizes: {0: 2283796, 1: 2283995, 11: 2283995, 22: 2284023, 24: 2284313, 33: 2284341, 24602: 2319846, 24603: 2319845, 24611: 2328899, 24612: 2328955, 24667: 2329213}
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | --------------------------------------------------
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | 
[2026-01-09 03:52:14] 2026-01-09 08:51:18,838 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 03:52:14] 2026-01-09 08:51:18,889 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,891 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,891 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:52:14] 2026-01-09 08:51:18,891 | INFO     | job 6963077472 has completed (purged errors)
[2026-01-09 03:52:14] 2026-01-09 08:51:18,891 | INFO     | overall cleanup function is called
[2026-01-09 03:52:14] 2026-01-09 08:51:19,936 | INFO     | --- collectZombieJob: --- 10, [3299389]
[2026-01-09 03:52:14] 2026-01-09 08:51:19,936 | INFO     | zombie collector waiting for pid 3299389
[2026-01-09 03:52:14] 2026-01-09 08:51:19,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:52:14] 2026-01-09 08:51:19,936 | INFO     | collected zombie processes
[2026-01-09 03:52:14] 2026-01-09 08:51:19,936 | INFO     | will attempt to kill all subprocesses of pid=3299389
[2026-01-09 03:52:14] 2026-01-09 08:51:21,667 | INFO     | process IDs to be killed: [3299389] (in reverse order)
[2026-01-09 03:52:14] 2026-01-09 08:51:22,370 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:52:14] 2026-01-09 08:51:22,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:52:14] 2026-01-09 08:51:22,419 | INFO     | did not find any defunct processes belonging to 3299389
[2026-01-09 03:52:14] 2026-01-09 08:51:22,448 | INFO     | did not find any defunct processes belonging to 3299389
[2026-01-09 03:52:14] 2026-01-09 08:51:22,448 | INFO     | ready for new job
[2026-01-09 03:52:14] 2026-01-09 08:51:22,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:52:14] 2026-01-09 08:51:22,451 | INFO     | ***************************************
[2026-01-09 03:52:14] 2026-01-09 08:51:22,451 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:52:14] 2026-01-09 08:51:22,451 | INFO     | ***************************************
[2026-01-09 03:52:14] 2026-01-09 08:51:22,451 | INFO     | 
[2026-01-09 03:52:14] 2026-01-09 08:51:22,455 | INFO     | architecture information:
[2026-01-09 03:52:14] 2026-01-09 08:51:22,455 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:52:14] 2026-01-09 08:51:22,525 | INFO     | cat /etc/os-release:
[2026-01-09 03:52:14] NAME="CentOS Linux"
[2026-01-09 03:52:14] VERSION="7 (Core)"
[2026-01-09 03:52:14] ID="centos"
[2026-01-09 03:52:14] ID_LIKE="rhel fedora"
[2026-01-09 03:52:14] VERSION_ID="7"
[2026-01-09 03:52:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:52:14] ANSI_COLOR="0;31"
[2026-01-09 03:52:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:52:14] HOME_URL="https://www.centos.org/"
[2026-01-09 03:52:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:52:14] 
[2026-01-09 03:52:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:52:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:52:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:52:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:52:14] 
[2026-01-09 03:52:14] 2026-01-09 08:51:22,525 | INFO     | ***************************************
[2026-01-09 03:52:14] 2026-01-09 08:51:23,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 03:52:14] 2026-01-09 08:51:23,190 | INFO     | sufficient remaining disk space (83492864000 B)
[2026-01-09 03:52:14] 2026-01-09 08:51:23,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:52:14] 2026-01-09 08:51:23,190 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:52:14] 2026-01-09 08:51:23,190 | INFO     | update_server=False
[2026-01-09 03:52:14] 2026-01-09 08:51:23,191 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:52:14] 2026-01-09 08:51:23,414 | INFO     | all data control threads have been joined
[2026-01-09 03:52:14] 2026-01-09 08:51:23,697 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:52:14] 2026-01-09 08:51:23,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:52:14] 2026-01-09 08:51:23,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:52:14] 2026-01-09 08:51:23,829 | INFO     | aborting loop
[2026-01-09 03:52:14] 2026-01-09 08:51:23,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:52:14] 2026-01-09 08:51:24,198 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:24,286 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:24,312 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:24,420 | INFO     | [data] control thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:24,435 | INFO     | all job control threads have been joined
[2026-01-09 03:52:14] 2026-01-09 08:51:24,493 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:24,668 | INFO     | all payload control threads have been joined
[2026-01-09 03:52:14] 2026-01-09 08:51:24,767 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:24,771 | INFO     | [job] validate thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:24,778 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:24,835 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:24,860 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:24,984 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:25,405 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:25,442 | INFO     | [job] control thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:25,677 | INFO     | [payload] control thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:25,704 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:27,719 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:52:14] 2026-01-09 08:51:53,220 | INFO     | PID=3291095 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 03:52:14] 2026-01-09 08:51:53,220 | INFO     | .. there are 13 such processes running
[2026-01-09 03:52:14] 2026-01-09 08:51:53,220 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:52:14] 2026-01-09 08:51:53,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:52:14] 2026-01-09 08:51:53,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:52:14] 2026-01-09 08:52:05,141 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:52:14] 2026-01-09 08:52:06,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631569135424)>', '<ExcThread(monitor, started 139631215482624)>']
[2026-01-09 03:52:14] 2026-01-09 08:52:07,304 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:52:14] 2026-01-09 08:52:07,304 | INFO     | [monitor] control thread has ended
[2026-01-09 03:52:14] 2026-01-09 08:52:11,683 | INFO     | all workflow threads have been joined
[2026-01-09 03:52:14] 2026-01-09 08:52:11,683 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:52:14] 2026-01-09 08:52:11,686 | INFO     | traces error code: 0
[2026-01-09 03:52:14] 2026-01-09 08:52:11,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:52:14] 2026-01-09 08:52:11,965 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:52:14] 2026-01-09 08:52:11,967 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:52:14] 2026-01-09 08:52:11,969 [wrapper] pilotpid: 3291095
[2026-01-09 03:52:14] 2026-01-09 08:52:11,971 [wrapper] Pilot exit status: 0
[2026-01-09 03:52:14] 2026-01-09 08:52:12,308 [wrapper] pandaids: 6963077472
[2026-01-09 03:52:14] 2026-01-09 08:52:12,741 [wrapper] cleanup supervisor_pilot 4016768 3291096
[2026-01-09 03:52:14] 2026-01-09 08:52:12,744 [wrapper] Test setup, not cleaning
[2026-01-09 03:52:14] 2026-01-09 08:52:12,809 [wrapper] apfmon messages muted
[2026-01-09 03:52:14] 2026-01-09 08:52:12,857 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:52:14] 2026-01-09 08:52:12,908 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:52:14]  *** Error codes and diagnostics ***
[2026-01-09 03:52:14]     "exeErrorCode": 0,
[2026-01-09 03:52:14]     "exeErrorDiag": "",
[2026-01-09 03:52:14]     "pilotErrorCode": 0,
[2026-01-09 03:52:14]     "pilotErrorDiag": "",
[2026-01-09 03:52:14]  *** Listing of results directory ***
[2026-01-09 03:52:14] total 448792
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:06 pilot3.tar.gz
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:07 queuedata.json
[2026-01-09 03:52:14] -rwx------. 1 boincer umatlas     36322 Jan  8 06:07 runpilot2-wrapper.sh
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas       100 Jan  8 20:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:52:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 20:58 run_atlas
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas       105 Jan  8 20:58 job.xml
[2026-01-09 03:52:14] -rw-r--r--. 2 boincer umatlas 228428852 Jan  8 20:58 EVNT.47898824._000961.pool.root.1
[2026-01-09 03:52:14] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:58 start_atlas.sh
[2026-01-09 03:52:14] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 20:58 shared
[2026-01-09 03:52:14] -rw-r--r--. 2 boincer umatlas    592392 Jan  8 20:58 input.tar.gz
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas         0 Jan  8 20:58 boinc_lockfile
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 20:58 pandaJob.out
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas        57 Jan  8 20:58 setup.sh.local
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas    989821 Jan  8 20:59 agis_schedconf.cvmfs.json
[2026-01-09 03:52:14] drwx------. 5 boincer umatlas      4096 Jan  8 20:59 pilot3
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas      6906 Jan  9 03:46 init_data.xml
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas 219682796 Jan  9 03:48 HITS.47898826._024127.pool.root.1
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas       531 Jan  9 03:48 boinc_task_state.xml
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas      1029 Jan  9 03:50 memory_monitor_summary.json
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas   1516240 Jan  9 03:50 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas    577892 Jan  9 03:50 log.47898826._024127.job.log.tgz.1
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas        95 Jan  9 03:51 pilot_heartbeat.json
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas      7772 Jan  9 03:51 heartbeat.json
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 03:51 boinc_mmap_file
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas        28 Jan  9 03:51 wrapper_checkpoint.txt
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas      4824 Jan  9 03:52 pilotlog.txt
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas   3190539 Jan  9 03:52 log.47898826._024127.job.log.1
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas       357 Jan  9 03:52 output.list
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas       620 Jan  9 03:52 runtime_log
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas   3788800 Jan  9 03:52 result.tar.gz
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 03:52 runtime_log.err
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas       657 Jan  9 03:52 qD9KDmb22x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm01eKDmROmYrn.diag
[2026-01-09 03:52:14] -rw-r--r--. 1 boincer umatlas     21153 Jan  9 03:52 stderr.txt
[2026-01-09 03:52:14] HITS file was successfully produced:
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas 219682796 Jan  9 03:48 shared/HITS.pool.root.1
[2026-01-09 03:52:14]  *** Contents of shared directory: ***
[2026-01-09 03:52:14] total 441912
[2026-01-09 03:52:14] -rw-r--r--. 2 boincer umatlas 228428852 Jan  8 20:58 ATLAS.root_0
[2026-01-09 03:52:14] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:58 start_atlas.sh
[2026-01-09 03:52:14] -rw-r--r--. 2 boincer umatlas    592392 Jan  8 20:58 input.tar.gz
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas 219682796 Jan  9 03:48 HITS.pool.root.1
[2026-01-09 03:52:14] -rw-------. 1 boincer umatlas   3788800 Jan  9 03:52 result.tar.gz
03:52:15 (3284376): run_atlas exited; CPU time 46158.261532
03:52:15 (3284376): called boinc_finish(0)

</stderr_txt>
]]>

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