Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:31:43 (10574): wrapper (7.7.26015): starting
07:31:43 (10574): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:31:43] Arguments: --nthreads 8
[2026-01-09 07:31:43] Threads: 8
[2026-01-09 07:31:43] Checking for CVMFS
[2026-01-09 07:31:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:31:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:31:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:31:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:31:44] 2.11.2.0 21950 35057 93656 154934 2 56 22512279 25165824 0 130560 0 16820103 99.835 9542009 2981 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 07:31:44] CVMFS is ok
[2026-01-09 07:31:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:31:44] Checking for apptainer binary...
[2026-01-09 07:31:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:31:44] Running /usr/bin/apptainer --version
[2026-01-09 07:31:44] apptainer version 1.3.2-1.el7
[2026-01-09 07:31:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:31:45] cg-vwn481.simple-grid.lan
[2026-01-09 07:31:45] apptainer works
[2026-01-09 07:31:45] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:31:45] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:31:45] Starting ATLAS job with PandaID=6963155715
[2026-01-09 07:31:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:03:32]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:03:32] 2026-01-09 09:02:54,415 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 10:03:32] 2026-01-09 09:02:54,687 | INFO     | time since job start (9057s) is within the limit (349056.0s)
[2026-01-09 10:03:32] 2026-01-09 09:02:55,133 | INFO     | monitor loop #616: job 0:6963155715 is in state 'finished'
[2026-01-09 10:03:32] 2026-01-09 09:02:55,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:03:32] 2026-01-09 09:02:56,692 | INFO     | time since job start (9059s) is within the limit (349056.0s)
[2026-01-09 10:03:32] 2026-01-09 09:02:57,637 | INFO     | monitor loop #617: job 0:6963155715 is in state 'finished'
[2026-01-09 10:03:32] 2026-01-09 09:02:57,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:03:32] 2026-01-09 09:02:58,697 | INFO     | time since job start (9061s) is within the limit (349056.0s)
[2026-01-09 10:03:32] 2026-01-09 09:02:59,703 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 10:03:32] 2026-01-09 09:02:59,705 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 10:03:32] 2026-01-09 09:02:59,708 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6963155715/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:03:32] 2026-01-09 09:02:59,709 | INFO     | extracted standard info from prmon json
[2026-01-09 10:03:32] 2026-01-09 09:02:59,709 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:03:32] 2026-01-09 09:02:59,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:03:32] 2026-01-09 09:02:59,710 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:03:32] 2026-01-09 09:02:59,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:03:32] 2026-01-09 09:02:59,714 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:03:32] 2026-01-09 09:02:59,714 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,715 | INFO     | sum of deviations: 1450596805.5000021
[2026-01-09 10:03:32] 2026-01-09 09:02:59,715 | INFO     | mean x: 1767944827.5
[2026-01-09 10:03:32] 2026-01-09 09:02:59,715 | INFO     | mean y: 2524436.9121621624
[2026-01-09 10:03:32] 2026-01-09 09:02:59,715 | INFO     | intersect: -2548835208.1513615
[2026-01-09 10:03:32] 2026-01-09 09:02:59,716 | INFO     | chi2: 1.5584220340680954
[2026-01-09 10:03:32] 2026-01-09 09:02:59,716 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,717 | INFO     | sum of deviations: 1632123137.0000029
[2026-01-09 10:03:32] 2026-01-09 09:02:59,717 | INFO     | mean x: 1767944675.0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,717 | INFO     | mean y: 2524718.4825174827
[2026-01-09 10:03:32] 2026-01-09 09:02:59,718 | INFO     | intersect: -3179886478.578612
[2026-01-09 10:03:32] 2026-01-09 09:02:59,718 | INFO     | chi2: 1.5594187532443293
[2026-01-09 10:03:32] 2026-01-09 09:02:59,718 | INFO     | current chi2=1.5594187532443293 (change=-0.06395694840325544 %)
[2026-01-09 10:03:32] 2026-01-09 09:02:59,718 | INFO     | right removable region: 142
[2026-01-09 10:03:32] 2026-01-09 09:02:59,719 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,720 | INFO     | sum of deviations: -20128222582.0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,720 | INFO     | mean x: 1767944980.0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,720 | INFO     | mean y: 2557320.6993006994
[2026-01-09 10:03:32] 2026-01-09 09:02:59,720 | INFO     | intersect: 39249774960.42709
[2026-01-09 10:03:32] 2026-01-09 09:02:59,720 | INFO     | chi2: 0.14629693576617187
[2026-01-09 10:03:32] 2026-01-09 09:02:59,721 | INFO     | current chi2=0.14629693576617187 (change=90.61249568037233 %)
[2026-01-09 10:03:32] 2026-01-09 09:02:59,721 | INFO     | sum of square deviations: 814878534.5
[2026-01-09 10:03:32] 2026-01-09 09:02:59,722 | INFO     | sum of deviations: -20584081560.0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,722 | INFO     | mean x: 1767945132.5
[2026-01-09 10:03:32] 2026-01-09 09:02:59,722 | INFO     | mean y: 2557986.1739130435
[2026-01-09 10:03:32] 2026-01-09 09:02:59,722 | INFO     | intersect: 44661393947.92179
[2026-01-09 10:03:32] 2026-01-09 09:02:59,723 | INFO     | chi2: 0.12018738893028875
[2026-01-09 10:03:32] 2026-01-09 09:02:59,723 | INFO     | current chi2=0.12018738893028875 (change=17.846954004295966 %)
[2026-01-09 10:03:32] 2026-01-09 09:02:59,723 | INFO     | left removable region: 20
[2026-01-09 10:03:32] 2026-01-09 09:02:59,723 | INFO     | sum of square deviations: 563026370.5
[2026-01-09 10:03:32] 2026-01-09 09:02:59,724 | INFO     | sum of deviations: -11568602541.99999
[2026-01-09 10:03:32] 2026-01-09 09:02:59,724 | INFO     | mean x: 1767945254.5
[2026-01-09 10:03:32] 2026-01-09 09:02:59,725 | INFO     | mean y: 2543615.7377049183
[2026-01-09 10:03:32] 2026-01-09 09:02:59,725 | INFO     | intersect: 36328827848.503525
[2026-01-09 10:03:32] 2026-01-09 09:02:59,725 | INFO     | chi2: 0.098368539086428
[2026-01-09 10:03:32] 2026-01-09 09:02:59,725 | INFO     | current memory leak: -20.55 B/s (using 122 data points, chi2=0.10)
[2026-01-09 10:03:32] 2026-01-09 09:02:59,726 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 10:03:32] 2026-01-09 09:02:59,726 | INFO     | ..............................
[2026-01-09 10:03:32] 2026-01-09 09:02:59,727 | INFO     | . Timing measurements:
[2026-01-09 10:03:32] 2026-01-09 09:02:59,727 | INFO     | . get job = 0 s
[2026-01-09 10:03:32] 2026-01-09 09:02:59,727 | INFO     | . initial setup = 1 s
[2026-01-09 10:03:32] 2026-01-09 09:02:59,727 | INFO     | . payload setup = 5 s
[2026-01-09 10:03:32] 2026-01-09 09:02:59,727 | INFO     | . stage-in = 0 s
[2026-01-09 10:03:32] 2026-01-09 09:02:59,727 | INFO     | . payload execution = 9024 s
[2026-01-09 10:03:32] 2026-01-09 09:02:59,727 | INFO     | . stage-out = 1 s
[2026-01-09 10:03:32] 2026-01-09 09:02:59,728 | INFO     | . log creation = 0 s
[2026-01-09 10:03:32] 2026-01-09 09:02:59,728 | INFO     | ..............................
[2026-01-09 10:03:32] 2026-01-09 09:02:59,839 | INFO     | 
[2026-01-09 10:03:32] 2026-01-09 09:02:59,839 | INFO     | job summary report
[2026-01-09 10:03:32] 2026-01-09 09:02:59,839 | INFO     | --------------------------------------------------
[2026-01-09 10:03:32] 2026-01-09 09:02:59,839 | INFO     | PanDA job id: 6963155715
[2026-01-09 10:03:32] 2026-01-09 09:02:59,840 | INFO     | task id: 47898826
[2026-01-09 10:03:32] 2026-01-09 09:02:59,840 | INFO     | errors: (none)
[2026-01-09 10:03:32] 2026-01-09 09:02:59,840 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:03:32] 2026-01-09 09:02:59,840 | INFO     | pilot state: finished 
[2026-01-09 10:03:32] 2026-01-09 09:02:59,840 | INFO     | transexitcode: 0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,840 | INFO     | exeerrorcode: 0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,840 | INFO     | exeerrordiag: 
[2026-01-09 10:03:32] 2026-01-09 09:02:59,840 | INFO     | exitcode: 0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,840 | INFO     | exitmsg: OK
[2026-01-09 10:03:32] 2026-01-09 09:02:59,841 | INFO     | cpuconsumptiontime: 68098 s
[2026-01-09 10:03:32] 2026-01-09 09:02:59,841 | INFO     | nevents: 400
[2026-01-09 10:03:32] 2026-01-09 09:02:59,841 | INFO     | neventsw: 0
[2026-01-09 10:03:32] 2026-01-09 09:02:59,841 | INFO     | pid: 20737
[2026-01-09 10:03:32] 2026-01-09 09:02:59,841 | INFO     | pgrp: 20737
[2026-01-09 10:03:32] 2026-01-09 09:02:59,841 | INFO     | corecount: 8
[2026-01-09 10:03:32] 2026-01-09 09:02:59,841 | INFO     | event service: False
[2026-01-09 10:03:32] 2026-01-09 09:02:59,842 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 12: 2284317, 9033: 2312142, 9034: 2312141, 9036: 2321353, 9039: 2321409, 9047: 2321603}
[2026-01-09 10:03:32] 2026-01-09 09:02:59,842 | INFO     | --------------------------------------------------
[2026-01-09 10:03:32] 2026-01-09 09:02:59,842 | INFO     | 
[2026-01-09 10:03:32] 2026-01-09 09:02:59,842 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-09 10:03:32] 2026-01-09 09:02:59,869 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,869 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,869 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,870 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,871 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:03:32] 2026-01-09 09:02:59,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,871 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:03:32] 2026-01-09 09:02:59,871 | INFO     | job 6963155715 has completed (purged errors)
[2026-01-09 10:03:32] 2026-01-09 09:02:59,871 | INFO     | overall cleanup function is called
[2026-01-09 10:03:32] 2026-01-09 09:02:59,916 | INFO     | PID=14308 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 10:03:32] 2026-01-09 09:03:00,879 | INFO     | --- collectZombieJob: --- 10, [20737]
[2026-01-09 10:03:32] 2026-01-09 09:03:00,879 | INFO     | zombie collector waiting for pid 20737
[2026-01-09 10:03:32] 2026-01-09 09:03:00,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:03:32] 2026-01-09 09:03:00,879 | INFO     | collected zombie processes
[2026-01-09 10:03:32] 2026-01-09 09:03:00,880 | INFO     | will attempt to kill all subprocesses of pid=20737
[2026-01-09 10:03:32] 2026-01-09 09:03:00,931 | INFO     | process IDs to be killed: [20737] (in reverse order)
[2026-01-09 10:03:32] 2026-01-09 09:03:00,972 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:03:32] 2026-01-09 09:03:00,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:03:32] 2026-01-09 09:03:00,975 | INFO     | did not find any defunct processes belonging to 20737
[2026-01-09 10:03:32] 2026-01-09 09:03:00,976 | INFO     | did not find any defunct processes belonging to 20737
[2026-01-09 10:03:32] 2026-01-09 09:03:00,976 | INFO     | ready for new job
[2026-01-09 10:03:32] 2026-01-09 09:03:00,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:03:32] 2026-01-09 09:03:00,978 | INFO     | ***************************************
[2026-01-09 10:03:32] 2026-01-09 09:03:00,978 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:03:32] 2026-01-09 09:03:00,978 | INFO     | ***************************************
[2026-01-09 10:03:32] 2026-01-09 09:03:00,978 | INFO     | 
[2026-01-09 10:03:32] 2026-01-09 09:03:00,979 | INFO     | pilot is running in a VM
[2026-01-09 10:03:32] 2026-01-09 09:03:00,979 | INFO     | architecture information:
[2026-01-09 10:03:32] 2026-01-09 09:03:00,979 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:03:32] 2026-01-09 09:03:00,996 | INFO     | cat /etc/os-release:
[2026-01-09 10:03:32] NAME="CentOS Linux"
[2026-01-09 10:03:32] VERSION="7 (Core)"
[2026-01-09 10:03:32] ID="centos"
[2026-01-09 10:03:32] ID_LIKE="rhel fedora"
[2026-01-09 10:03:32] VERSION_ID="7"
[2026-01-09 10:03:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:03:32] ANSI_COLOR="0;31"
[2026-01-09 10:03:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:03:32] HOME_URL="https://www.centos.org/"
[2026-01-09 10:03:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:03:32] 
[2026-01-09 10:03:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:03:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:03:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:03:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:03:32] 
[2026-01-09 10:03:32] 2026-01-09 09:03:00,996 | INFO     | ***************************************
[2026-01-09 10:03:32] 2026-01-09 09:03:01,499 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-09 10:03:32] 2026-01-09 09:03:01,516 | INFO     | sufficient remaining disk space (498289606656 B)
[2026-01-09 10:03:32] 2026-01-09 09:03:01,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:03:32] 2026-01-09 09:03:01,517 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:03:32] 2026-01-09 09:03:01,517 | INFO     | update_server=False
[2026-01-09 10:03:32] 2026-01-09 09:03:01,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:03:32] 2026-01-09 09:03:01,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:03:32] 2026-01-09 09:03:01,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:03:32] 2026-01-09 09:03:01,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:03:32] 2026-01-09 09:03:01,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:03:32] 2026-01-09 09:03:01,518 | INFO     | aborting loop
[2026-01-09 10:03:32] 2026-01-09 09:03:02,088 | INFO     | all data control threads have been joined
[2026-01-09 10:03:32] 2026-01-09 09:03:02,474 | INFO     | all payload control threads have been joined
[2026-01-09 10:03:32] 2026-01-09 09:03:02,519 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:02,524 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:02,524 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:02,765 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:02,772 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:03,009 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:03,094 | INFO     | [data] control thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:03,095 | INFO     | all job control threads have been joined
[2026-01-09 10:03:32] 2026-01-09 09:03:03,160 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:03,243 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:03,418 | INFO     | [job] validate thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:03,480 | INFO     | [payload] control thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:03,501 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:03,525 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:03,927 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:04,101 | INFO     | [job] control thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:05,526 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:03:32] 2026-01-09 09:03:12,075 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:03:32] 2026-01-09 09:03:13,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140012514502464)>', '<ExcThread(monitor, started 140011672418048)>']
[2026-01-09 10:03:32] 2026-01-09 09:03:18,148 | INFO     | all workflow threads have been joined
[2026-01-09 10:03:32] 2026-01-09 09:03:18,148 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:03:32] 2026-01-09 09:03:18,148 | INFO     | traces error code: 0
[2026-01-09 10:03:32] 2026-01-09 09:03:18,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:03:32] 2026-01-09 09:03:31,992 | INFO     | PID=14308 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 10:03:32] 2026-01-09 09:03:31,992 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:03:32] 2026-01-09 09:03:31,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:03:32] 2026-01-09 09:03:31,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:03:32] 2026-01-09 09:03:31,993 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:03:32] 2026-01-09 09:03:31,993 | INFO     | [monitor] control thread has ended
[2026-01-09 10:03:32] 2026-01-09 09:03:32,106 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:03:32] 2026-01-09 09:03:32,109 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:03:32] 2026-01-09 09:03:32,112 [wrapper] pilotpid: 14308
[2026-01-09 10:03:32] 2026-01-09 09:03:32,115 [wrapper] Pilot exit status: 0
[2026-01-09 10:03:32] 2026-01-09 09:03:32,128 [wrapper] pandaids: 6963155715
[2026-01-09 10:03:32] 2026-01-09 09:03:32,155 [wrapper] cleanup supervisor_pilot  4847 14309
[2026-01-09 10:03:32] 2026-01-09 09:03:32,158 [wrapper] Test setup, not cleaning
[2026-01-09 10:03:32] 2026-01-09 09:03:32,161 [wrapper] apfmon messages muted
[2026-01-09 10:03:32] 2026-01-09 09:03:32,164 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:03:32] 2026-01-09 09:03:32,167 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:03:32]  *** Error codes and diagnostics ***
[2026-01-09 10:03:32]     "exeErrorCode": 0,
[2026-01-09 10:03:32]     "exeErrorDiag": "",
[2026-01-09 10:03:32]     "pilotErrorCode": 0,
[2026-01-09 10:03:32]     "pilotErrorDiag": "",
[2026-01-09 10:03:32]  *** Listing of results directory ***
[2026-01-09 10:03:32] total 440476
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 10:03:32] -rwx------. 1 boinc boinc     36322 Jan  8 20:06 runpilot2-wrapper.sh
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:07 queuedata.json
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc       100 Jan  9 07:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:03:32] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 07:31 run_atlas
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc       105 Jan  9 07:31 job.xml
[2026-01-09 10:03:32] -rw-r--r--. 2 boinc boinc 227060012 Jan  9 07:31 EVNT.47898824._001198.pool.root.1
[2026-01-09 10:03:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:31 start_atlas.sh
[2026-01-09 10:03:32] drwxrwx--x. 2 boinc boinc        68 Jan  9 07:31 shared
[2026-01-09 10:03:32] -rw-r--r--. 2 boinc boinc    592391 Jan  9 07:31 input.tar.gz
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc      6391 Jan  9 07:31 init_data.xml
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc         0 Jan  9 07:31 boinc_lockfile
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc      2519 Jan  9 07:31 pandaJob.out
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc    989771 Jan  9 07:31 agis_schedconf.cvmfs.json
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc   1516240 Jan  9 07:31 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:03:32] drwx------. 5 boinc boinc      4096 Jan  9 07:31 pilot3
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc 216876590 Jan  9 10:02 HITS.47898826._030937.pool.root.1
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc       529 Jan  9 10:02 boinc_task_state.xml
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc      1009 Jan  9 10:02 memory_monitor_summary.json
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc        95 Jan  9 10:02 pilot_heartbeat.json
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc    385949 Jan  9 10:02 log.47898826._030937.job.log.tgz.1
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc      7764 Jan  9 10:02 heartbeat.json
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc      8192 Jan  9 10:03 boinc_mmap_file
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc        27 Jan  9 10:03 wrapper_checkpoint.txt
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc       745 Jan  9 10:03 pilotlog.txt
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc   1218572 Jan  9 10:03 log.47898826._030937.job.log.1
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc       357 Jan  9 10:03 output.list
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc       620 Jan  9 10:03 runtime_log
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc   1628160 Jan  9 10:03 result.tar.gz
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc      8832 Jan  9 10:03 runtime_log.err
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc       652 Jan  9 10:03 OVTNDmVWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFDlKDmgZuknm.diag
[2026-01-09 10:03:32] -rw-r--r--. 1 boinc boinc     21195 Jan  9 10:03 stderr.txt
[2026-01-09 10:03:32] HITS file was successfully produced:
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc 216876590 Jan  9 10:02 shared/HITS.pool.root.1
[2026-01-09 10:03:32]  *** Contents of shared directory: ***
[2026-01-09 10:03:32] total 435724
[2026-01-09 10:03:32] -rw-r--r--. 2 boinc boinc 227060012 Jan  9 07:31 ATLAS.root_0
[2026-01-09 10:03:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 07:31 start_atlas.sh
[2026-01-09 10:03:32] -rw-r--r--. 2 boinc boinc    592391 Jan  9 07:31 input.tar.gz
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc 216876590 Jan  9 10:02 HITS.pool.root.1
[2026-01-09 10:03:32] -rw-------. 1 boinc boinc   1628160 Jan  9 10:03 result.tar.gz
10:03:34 (10574): run_atlas exited; CPU time 68154.648522
10:03:34 (10574): called boinc_finish(0)

</stderr_txt>
]]>

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