Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:16:19 (1101332): wrapper (7.7.26015): starting
16:16:19 (1101332): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 16:16:19] Arguments: --nthreads 12
[2026-01-08 16:16:19] Threads: 12
[2026-01-08 16:16:19] Checking for CVMFS
[2026-01-08 16:16:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 16:16:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 16:16:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 16:16:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 16:16:20] 2.11.5.0 3590583 90970 382564 154924 2 844 27106591 45568001 14620 130560 0 711616946 99.784 443868573 22069 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 16:16:20] CVMFS is ok
[2026-01-08 16:16:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 16:16:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 16:16:20] Further information can be found at the LHC@home message board.
[2026-01-08 16:16:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 16:16:20] Checking for apptainer binary...
[2026-01-08 16:16:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 16:16:20] Running /usr/bin/apptainer --version
[2026-01-08 16:16:20] apptainer version 1.4.1-1.el9
[2026-01-08 16:16:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 16:16:21] wns0047.triumf.lcg
[2026-01-08 16:16:21] apptainer works
[2026-01-08 16:16:21] Set ATHENA_PROC_NUMBER=12
[2026-01-08 16:16:21] Set ATHENA_CORE_NUMBER=12
[2026-01-08 16:16:21] Starting ATLAS job with PandaID=6963155258
[2026-01-08 16:16:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 16:21:07]  *** The last 200 lines of the pilot log: ***
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | WARNING  | wrong length of table data, x=[1767917872.0], y=[2735.0] (must be same and length>=4)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | could have reported an average CPU frequency of 2551 MHz (4 samples)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | ..............................
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . Timing measurements:
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . get job = 0 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . initial setup = 3 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . payload setup = 15 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . stage-in = 0 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . payload execution = 36 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . stage-out = 2 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . log creation = 0 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | ..............................
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 16:21:07] 2026-01-09 00:20:33,494 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963155258/pilotlog.txt
[2026-01-08 16:21:07] 2026-01-09 00:20:33,546 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 16:21:07] - Log from pilotlog.txt -
[2026-01-08 16:21:07] 2026-01-09 00:20:33,491 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963155258/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | INFO     | extracted standard info from prmon json
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | WARNING  | wrong length of table data, x=[1767917872.0], y=[2735.0] (must be same and length>=4)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | could have reported an average CPU frequency of 2551 MHz (4 samples)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | ..............................
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . Timing measurements:
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . get job = 0 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . initial setup = 3 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . payload setup = 15 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . stage-in = 0 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . payload execution = 36 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . stage-out = 2 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . log creation = 0 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | ..............................
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 16:21:07] 2026-01-09 00:20:33,494 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963155258/pilotlog.txt
[2026-01-08 16:21:07] 2026-01-09 00:20:33,547 | WARNING  | 
[2026-01-08 16:21:07] [begin log extracts]
[2026-01-08 16:21:07] - Log from pilotlog.txt -
[2026-01-08 16:21:07] 2026-01-09 00:20:33,491 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963155258/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | INFO     | extracted standard info from prmon json
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 16:21:07] 2026-01-09 00:20:33,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | WARNING  | wrong length of table data, x=[1767917872.0], y=[2735.0] (must be same and length>=4)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | could have reported an average CPU frequency of 2551 MHz (4 samples)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | ..............................
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . Timing measurements:
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . get job = 0 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . initial setup = 3 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . payload setup = 15 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . stage-in = 0 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . payload execution = 36 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . stage-out = 2 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | . log creation = 0 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | ..............................
[2026-01-08 16:21:07] 2026-01-09 00:20:33,493 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 16:21:07] 2026-01-09 00:20:33,494 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963155258/pilotlog.txt
[2026-01-08 16:21:07] [end log extracts]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,547 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,548 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 16:21:07] 2026-01-09 00:20:33,803 | INFO     | 
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | job summary report
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | --------------------------------------------------
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | PanDA job id: 6963155258
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | task id: 47898826
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 16:18:11,321 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | pilot state: failed 
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | transexitcode: 65
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | exeerrorcode: 65
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | exitcode: 65
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | cpuconsumptiontime: 17 s
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | nevents: 0
[2026-01-08 16:21:07] 2026-01-09 00:20:33,804 | INFO     | neventsw: 0
[2026-01-08 16:21:07] 2026-01-09 00:20:33,805 | INFO     | pid: 1123252
[2026-01-08 16:21:07] 2026-01-09 00:20:33,805 | INFO     | pgrp: 1123252
[2026-01-08 16:21:07] 2026-01-09 00:20:33,805 | INFO     | corecount: 12
[2026-01-08 16:21:07] 2026-01-09 00:20:33,805 | INFO     | event service: False
[2026-01-08 16:21:07] 2026-01-09 00:20:33,805 | INFO     | sizes: {0: 2283797, 1: 2283996, 12: 2283996, 13: 2284286, 23: 2284342, 55: 2307563, 56: 2307667, 59: 2311987, 62: 2312015, 190: 2312181}
[2026-01-08 16:21:07] 2026-01-09 00:20:33,805 | INFO     | --------------------------------------------------
[2026-01-08 16:21:07] 2026-01-09 00:20:33,805 | INFO     | 
[2026-01-08 16:21:07] 2026-01-09 00:20:33,805 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 16:21:07] 2026-01-09 00:20:33,821 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,821 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,821 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,821 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | job 6963155258 has completed (purged errors)
[2026-01-08 16:21:07] 2026-01-09 00:20:33,822 | INFO     | overall cleanup function is called
[2026-01-08 16:21:07] 2026-01-09 00:20:34,830 | INFO     | --- collectZombieJob: --- 10, [1123252]
[2026-01-08 16:21:07] 2026-01-09 00:20:34,830 | INFO     | zombie collector waiting for pid 1123252
[2026-01-08 16:21:07] 2026-01-09 00:20:34,830 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 16:21:07] 2026-01-09 00:20:34,830 | INFO     | collected zombie processes
[2026-01-08 16:21:07] 2026-01-09 00:20:34,830 | INFO     | will attempt to kill all subprocesses of pid=1123252
[2026-01-08 16:21:07] 2026-01-09 00:20:35,776 | INFO     | process IDs to be killed: [1123252] (in reverse order)
[2026-01-08 16:21:07] 2026-01-09 00:20:36,004 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 16:21:07] 2026-01-09 00:20:36,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 16:21:07] 2026-01-09 00:20:36,016 | INFO     | did not find any defunct processes belonging to 1123252
[2026-01-08 16:21:07] 2026-01-09 00:20:36,025 | INFO     | did not find any defunct processes belonging to 1123252
[2026-01-08 16:21:07] 2026-01-09 00:20:36,026 | INFO     | ready for new job
[2026-01-08 16:21:07] 2026-01-09 00:20:36,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 16:21:07] 2026-01-09 00:20:36,027 | INFO     | ***************************************
[2026-01-08 16:21:07] 2026-01-09 00:20:36,027 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 16:21:07] 2026-01-09 00:20:36,027 | INFO     | ***************************************
[2026-01-08 16:21:07] 2026-01-09 00:20:36,027 | INFO     | 
[2026-01-08 16:21:07] 2026-01-09 00:20:36,029 | INFO     | architecture information:
[2026-01-08 16:21:07] 2026-01-09 00:20:36,029 | INFO     | executing command: cat /etc/os-release
[2026-01-08 16:21:07] 2026-01-09 00:20:36,044 | INFO     | cat /etc/os-release:
[2026-01-08 16:21:07] NAME="CentOS Linux"
[2026-01-08 16:21:07] VERSION="7 (Core)"
[2026-01-08 16:21:07] ID="centos"
[2026-01-08 16:21:07] ID_LIKE="rhel fedora"
[2026-01-08 16:21:07] VERSION_ID="7"
[2026-01-08 16:21:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 16:21:07] ANSI_COLOR="0;31"
[2026-01-08 16:21:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 16:21:07] HOME_URL="https://www.centos.org/"
[2026-01-08 16:21:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 16:21:07] 
[2026-01-08 16:21:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 16:21:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 16:21:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 16:21:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 16:21:07] 
[2026-01-08 16:21:07] 2026-01-09 00:20:36,044 | INFO     | ***************************************
[2026-01-08 16:21:07] 2026-01-09 00:20:36,549 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 16:21:07] 2026-01-09 00:20:36,720 | INFO     | sufficient remaining disk space (1932043223040 B)
[2026-01-08 16:21:07] 2026-01-09 00:20:36,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 16:21:07] 2026-01-09 00:20:36,720 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 16:21:07] 2026-01-09 00:20:36,720 | INFO     | update_server=False
[2026-01-08 16:21:07] 2026-01-09 00:20:36,720 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 16:21:07] 2026-01-09 00:20:36,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 16:21:07] 2026-01-09 00:20:36,744 | INFO     | all data control threads have been joined
[2026-01-08 16:21:07] 2026-01-09 00:20:36,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:21:07] 2026-01-09 00:20:36,756 | INFO     | aborting loop
[2026-01-08 16:21:07] 2026-01-09 00:20:37,376 | INFO     | all payload control threads have been joined
[2026-01-08 16:21:07] 2026-01-09 00:20:37,726 | INFO     | [job] retrieve thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:37,750 | INFO     | [data] control thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:37,762 | INFO     | [job] job monitor thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:38,228 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:38,234 | INFO     | all job control threads have been joined
[2026-01-08 16:21:07] 2026-01-09 00:20:38,382 | INFO     | [payload] control thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:38,425 | INFO     | [payload] failed_post thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:38,480 | INFO     | [payload] validate_post thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:38,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 16:21:07] 2026-01-09 00:20:38,728 | INFO     | [data] copytool_out thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:38,757 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:38,829 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:38,846 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:21:07] 2026-01-09 00:20:38,939 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:38,955 | INFO     | [job] validate thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:39,087 | INFO     | [data] copytool_in thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:39,240 | INFO     | [job] control thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:39,852 | INFO     | [job] queue monitor thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:42,715 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 16:21:07] 2026-01-09 00:20:48,910 | INFO     | [monitor] cgroup control has ended
[2026-01-08 16:21:07] 2026-01-09 00:20:49,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140603842037568)>', '<ExcThread(monitor, started 140602909902592)>']
[2026-01-08 16:21:07] 2026-01-09 00:20:54,176 | INFO     | all workflow threads have been joined
[2026-01-08 16:21:07] 2026-01-09 00:20:54,176 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 16:21:07] 2026-01-09 00:20:54,176 | INFO     | traces error code: 0
[2026-01-08 16:21:07] 2026-01-09 00:20:54,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 16:21:07] 2026-01-09 00:21:06,161 | INFO     | PID=1108928 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 16:21:07] 2026-01-09 00:21:06,161 | INFO     | .. there are 35 such processes running
[2026-01-08 16:21:07] 2026-01-09 00:21:06,162 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 16:21:07] 2026-01-09 00:21:06,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 16:21:07] 2026-01-09 00:21:06,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 16:21:07] 2026-01-09 00:21:06,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 16:21:07] 2026-01-09 00:21:06,162 | INFO     | [monitor] control thread has ended
[2026-01-08 16:21:07] 2026-01-09 00:21:06,295 [wrapper] ==== pilot stdout END ====
[2026-01-08 16:21:07] 2026-01-09 00:21:06,297 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 16:21:07] 2026-01-09 00:21:06,299 [wrapper] pilotpid: 1108928
[2026-01-08 16:21:07] 2026-01-09 00:21:06,300 [wrapper] Pilot exit status: 0
[2026-01-08 16:21:07] 2026-01-09 00:21:06,356 [wrapper] pandaids: 6963155258
[2026-01-08 16:21:07] 2026-01-09 00:21:06,457 [wrapper] cleanup supervisor_pilot 1108934 1108929
[2026-01-08 16:21:07] 2026-01-09 00:21:06,460 [wrapper] Test setup, not cleaning
[2026-01-08 16:21:07] 2026-01-09 00:21:06,462 [wrapper] apfmon messages muted
[2026-01-08 16:21:07] 2026-01-09 00:21:06,464 [wrapper] ==== wrapper stdout END ====
[2026-01-08 16:21:07] 2026-01-09 00:21:06,466 [wrapper] ==== wrapper stderr END ====
[2026-01-08 16:21:07]  *** Error codes and diagnostics ***
[2026-01-08 16:21:07]     "exeErrorCode": 65,
[2026-01-08 16:21:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 16:21:07]     "pilotErrorCode": 1305,
[2026-01-08 16:21:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 16:21:07]  *** Listing of results directory ***
[2026-01-08 16:21:07] total 222800
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc    579449 Jan  8 11:06 pilot3.tar.gz
[2026-01-08 16:21:07] -rwx------. 1 boinc boinc     36322 Jan  8 11:06 runpilot2-wrapper.sh
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc      5112 Jan  8 11:07 queuedata.json
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc       100 Jan  8 16:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 16:21:07] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 16:16 run_atlas
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc       105 Jan  8 16:16 job.xml
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc      6595 Jan  8 16:16 init_data.xml
[2026-01-08 16:21:07] -rw-r--r--. 2 boinc boinc 224015239 Jan  8 16:16 EVNT.47898824._001181.pool.root.1
[2026-01-08 16:21:07] -rw-r--r--. 2 boinc boinc     15847 Jan  8 16:16 start_atlas.sh
[2026-01-08 16:21:07] drwxrwx--x. 2 boinc boinc      4096 Jan  8 16:16 shared
[2026-01-08 16:21:07] -rw-r--r--. 2 boinc boinc    592390 Jan  8 16:16 input.tar.gz
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc         0 Jan  8 16:16 boinc_lockfile
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc      2520 Jan  8 16:16 pandaJob.out
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc    989837 Jan  8 16:16 agis_schedconf.cvmfs.json
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc   1516240 Jan  8 16:16 agis_ddmendpoints.agis.ALL.json
[2026-01-08 16:21:07] drwx------. 5 boinc boinc      4096 Jan  8 16:16 pilot3
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc       523 Jan  8 16:18 boinc_task_state.xml
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc       947 Jan  8 16:18 memory_monitor_summary.json
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc     21578 Jan  8 16:18 log.47898826._030508.job.log.tgz.1
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc      8399 Jan  8 16:20 heartbeat.json
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc      8192 Jan  8 16:21 boinc_mmap_file
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc        22 Jan  8 16:21 wrapper_checkpoint.txt
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc        95 Jan  8 16:21 pilot_heartbeat.json
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc       823 Jan  8 16:21 pilotlog.txt
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc     89321 Jan  8 16:21 log.47898826._030508.job.log.1
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc       188 Jan  8 16:21 output.list
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc       620 Jan  8 16:21 runtime_log
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc    133120 Jan  8 16:21 result.tar.gz
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc       644 Jan  8 16:21 VNSMDm9VAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2xfKDmGZVQHm.diag
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc      8636 Jan  8 16:21 runtime_log.err
[2026-01-08 16:21:07] -rw-r--r--. 1 boinc boinc     21819 Jan  8 16:21 stderr.txt
[2026-01-08 16:21:07] No HITS result produced
[2026-01-08 16:21:07]  *** Contents of shared directory: ***
[2026-01-08 16:21:07] total 219496
[2026-01-08 16:21:07] -rw-r--r--. 2 boinc boinc 224015239 Jan  8 16:16 ATLAS.root_0
[2026-01-08 16:21:07] -rw-r--r--. 2 boinc boinc     15847 Jan  8 16:16 start_atlas.sh
[2026-01-08 16:21:07] -rw-r--r--. 2 boinc boinc    592390 Jan  8 16:16 input.tar.gz
[2026-01-08 16:21:07] -rw-------. 1 boinc boinc    133120 Jan  8 16:21 result.tar.gz
16:21:08 (1101332): run_atlas exited; CPU time 25.775212
16:21:08 (1101332): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN