Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:47:21 (14562): wrapper (7.7.26015): starting
18:47:21 (14562): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 18:47:21] Arguments: --nthreads 8
[2026-01-08 18:47:21] Threads: 8
[2026-01-08 18:47:21] Checking for CVMFS
[2026-01-08 18:47:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 18:47:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 18:47:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 18:47:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 18:47:21] 2.11.2.0 2991 30709 81572 154924 0 59 11844962 20275201 1 130560 0 4286038 99.796 1692605 30801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 18:47:21] CVMFS is ok
[2026-01-08 18:47:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 18:47:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 18:47:21] Further information can be found at the LHC@home message board.
[2026-01-08 18:47:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 18:47:21] Checking for apptainer binary...
[2026-01-08 18:47:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 18:47:21] Running /usr/bin/apptainer --version
[2026-01-08 18:47:21] apptainer version 1.3.2-1.el7
[2026-01-08 18:47:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 18:47:23] c-115-4.aglt2.org
[2026-01-08 18:47:23] apptainer works
[2026-01-08 18:47:23] Set ATHENA_PROC_NUMBER=8
[2026-01-08 18:47:23] Set ATHENA_CORE_NUMBER=8
[2026-01-08 18:47:23] Starting ATLAS job with PandaID=6962931554
[2026-01-08 18:47:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:13:59]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:13:59] 2026-01-09 02:12:57,728 | INFO     | monitor loop #652: job 0:6962931554 is in state 'finished'
[2026-01-08 21:13:59] 2026-01-09 02:12:57,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 21:13:59] 2026-01-09 02:12:57,926 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 21:13:59] 2026-01-09 02:12:57,930 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2026-01-08 21:13:59] 2026-01-09 02:12:57,932 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962931554/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:13:59] 2026-01-09 02:12:57,933 | INFO     | extracted standard info from prmon json
[2026-01-08 21:13:59] 2026-01-09 02:12:57,933 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:13:59] 2026-01-09 02:12:57,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:13:59] 2026-01-09 02:12:57,936 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:13:59] 2026-01-09 02:12:57,936 | INFO     | sum of square deviations: 906682928.6573422
[2026-01-08 21:13:59] 2026-01-09 02:12:57,937 | INFO     | sum of deviations: 3592056205.510504
[2026-01-08 21:13:59] 2026-01-09 02:12:57,937 | INFO     | mean x: 1767920424.4125874
[2026-01-08 21:13:59] 2026-01-09 02:12:57,937 | INFO     | mean y: 2986546.160839161
[2026-01-08 21:13:59] 2026-01-09 02:12:57,937 | INFO     | intersect: -7001082164.787613
[2026-01-08 21:13:59] 2026-01-09 02:12:57,938 | INFO     | chi2: 5.759611092593451
[2026-01-08 21:13:59] 2026-01-09 02:12:57,938 | INFO     | sum of square deviations: 814875945.275363
[2026-01-08 21:13:59] 2026-01-09 02:12:57,938 | INFO     | sum of deviations: 49169633756.42032
[2026-01-08 21:13:59] 2026-01-09 02:12:57,939 | INFO     | mean x: 1767920271.9275362
[2026-01-08 21:13:59] 2026-01-09 02:12:57,939 | INFO     | mean y: 3061766.9420289854
[2026-01-08 21:13:59] 2026-01-09 02:12:57,939 | INFO     | intersect: -106673289136.81824
[2026-01-08 21:13:59] 2026-01-09 02:12:57,939 | INFO     | chi2: 2.7719923264695554
[2026-01-08 21:13:59] 2026-01-09 02:12:57,939 | INFO     | current chi2=2.7719923264695554 (change=51.87188367571921 %)
[2026-01-08 21:13:59] 2026-01-09 02:12:57,939 | INFO     | sum of square deviations: 729487686.8270692
[2026-01-08 21:13:59] 2026-01-09 02:12:57,940 | INFO     | sum of deviations: 56842530710.54135
[2026-01-08 21:13:59] 2026-01-09 02:12:57,940 | INFO     | mean x: 1767920119.443609
[2026-01-08 21:13:59] 2026-01-09 02:12:57,940 | INFO     | mean y: 3075183.872180451
[2026-01-08 21:13:59] 2026-01-09 02:12:57,940 | INFO     | intersect: -137755320876.73184
[2026-01-08 21:13:59] 2026-01-09 02:12:57,941 | INFO     | chi2: 2.571586864250372
[2026-01-08 21:13:59] 2026-01-09 02:12:57,941 | INFO     | current chi2=2.571586864250372 (change=7.229654292529094 %)
[2026-01-08 21:13:59] 2026-01-09 02:12:57,941 | INFO     | right removable region: 132
[2026-01-08 21:13:59] 2026-01-09 02:12:57,941 | INFO     | sum of square deviations: 814839955.275363
[2026-01-08 21:13:59] 2026-01-09 02:12:57,942 | INFO     | sum of deviations: -36436367169.23188
[2026-01-08 21:13:59] 2026-01-09 02:12:57,942 | INFO     | mean x: 1767920576.9275362
[2026-01-08 21:13:59] 2026-01-09 02:12:57,942 | INFO     | mean y: 3052375.3768115942
[2026-01-08 21:13:59] 2026-01-09 02:12:57,942 | INFO     | intersect: 79057353591.13315
[2026-01-08 21:13:59] 2026-01-09 02:12:57,942 | INFO     | chi2: 3.3591142767518063
[2026-01-08 21:13:59] 2026-01-09 02:12:57,943 | INFO     | current chi2=3.3591142767518063 (change=41.67810599102001 %)
[2026-01-08 21:13:59] 2026-01-09 02:12:57,943 | INFO     | sum of square deviations: 729440960.421052
[2026-01-08 21:13:59] 2026-01-09 02:12:57,943 | INFO     | sum of deviations: -40571744885.10526
[2026-01-08 21:13:59] 2026-01-09 02:12:57,943 | INFO     | mean x: 1767920729.4210527
[2026-01-08 21:13:59] 2026-01-09 02:12:57,944 | INFO     | mean y: 3059727.037593985
[2026-01-08 21:13:59] 2026-01-09 02:12:57,944 | INFO     | intersect: 98335389145.11296
[2026-01-08 21:13:59] 2026-01-09 02:12:57,944 | INFO     | chi2: 3.326272930211956
[2026-01-08 21:13:59] 2026-01-09 02:12:57,944 | INFO     | current chi2=3.326272930211956 (change=0.9776787520193385 %)
[2026-01-08 21:13:59] 2026-01-09 02:12:57,944 | INFO     | left removable region: 20
[2026-01-08 21:13:59] 2026-01-09 02:12:57,944 | INFO     | sum of square deviations: 435612373.8571427
[2026-01-08 21:13:59] 2026-01-09 02:12:57,945 | INFO     | sum of deviations: 9383018093.357143
[2026-01-08 21:13:59] 2026-01-09 02:12:57,945 | INFO     | mean x: 1767920698.9642856
[2026-01-08 21:13:59] 2026-01-09 02:12:57,945 | INFO     | mean y: 3166361.089285714
[2026-01-08 21:13:59] 2026-01-09 02:12:57,945 | INFO     | intersect: -38077551500.801865
[2026-01-08 21:13:59] 2026-01-09 02:12:57,945 | INFO     | chi2: 0.012553504176746182
[2026-01-08 21:13:59] 2026-01-09 02:12:57,946 | INFO     | current memory leak: 21.54 B/s (using 112 data points, chi2=0.01)
[2026-01-08 21:13:59] 2026-01-09 02:12:57,946 | INFO     | could have reported an average CPU frequency of 2136 MHz (8 samples)
[2026-01-08 21:13:59] 2026-01-09 02:12:57,946 | INFO     | ..............................
[2026-01-08 21:13:59] 2026-01-09 02:12:57,946 | INFO     | . Timing measurements:
[2026-01-08 21:13:59] 2026-01-09 02:12:57,946 | INFO     | . get job = 0 s
[2026-01-08 21:13:59] 2026-01-09 02:12:57,946 | INFO     | . initial setup = 2 s
[2026-01-08 21:13:59] 2026-01-09 02:12:57,947 | INFO     | . payload setup = 10 s
[2026-01-08 21:13:59] 2026-01-09 02:12:57,947 | INFO     | . stage-in = 0 s
[2026-01-08 21:13:59] 2026-01-09 02:12:57,947 | INFO     | . payload execution = 8676 s
[2026-01-08 21:13:59] 2026-01-09 02:12:57,947 | INFO     | . stage-out = 0 s
[2026-01-08 21:13:59] 2026-01-09 02:12:57,947 | INFO     | . log creation = 0 s
[2026-01-08 21:13:59] 2026-01-09 02:12:57,947 | INFO     | ..............................
[2026-01-08 21:13:59] 2026-01-09 02:12:58,031 | INFO     | 
[2026-01-08 21:13:59] 2026-01-09 02:12:58,031 | INFO     | job summary report
[2026-01-08 21:13:59] 2026-01-09 02:12:58,031 | INFO     | --------------------------------------------------
[2026-01-08 21:13:59] 2026-01-09 02:12:58,031 | INFO     | PanDA job id: 6962931554
[2026-01-08 21:13:59] 2026-01-09 02:12:58,032 | INFO     | task id: 47961985
[2026-01-08 21:13:59] 2026-01-09 02:12:58,032 | INFO     | errors: (none)
[2026-01-08 21:13:59] 2026-01-09 02:12:58,032 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:13:59] 2026-01-09 02:12:58,032 | INFO     | pilot state: finished 
[2026-01-08 21:13:59] 2026-01-09 02:12:58,032 | INFO     | transexitcode: 0
[2026-01-08 21:13:59] 2026-01-09 02:12:58,033 | INFO     | exeerrorcode: 0
[2026-01-08 21:13:59] 2026-01-09 02:12:58,033 | INFO     | exeerrordiag: 
[2026-01-08 21:13:59] 2026-01-09 02:12:58,033 | INFO     | exitcode: 0
[2026-01-08 21:13:59] 2026-01-09 02:12:58,033 | INFO     | exitmsg: OK
[2026-01-08 21:13:59] 2026-01-09 02:12:58,033 | INFO     | cpuconsumptiontime: 64300 s
[2026-01-08 21:13:59] 2026-01-09 02:12:58,034 | INFO     | nevents: 150
[2026-01-08 21:13:59] 2026-01-09 02:12:58,034 | INFO     | neventsw: 0
[2026-01-08 21:13:59] 2026-01-09 02:12:58,034 | INFO     | pid: 24775
[2026-01-08 21:13:59] 2026-01-09 02:12:58,034 | INFO     | pgrp: 24775
[2026-01-08 21:13:59] 2026-01-09 02:12:58,034 | INFO     | corecount: 8
[2026-01-08 21:13:59] 2026-01-09 02:12:58,034 | INFO     | event service: False
[2026-01-08 21:13:59] 2026-01-09 02:12:58,035 | INFO     | sizes: {0: 2283720, 1: 2284576, 7: 2284838, 12: 2284866, 8690: 2313679, 8691: 2313678, 8692: 2322856, 8694: 2322912, 8701: 2323158}
[2026-01-08 21:13:59] 2026-01-09 02:12:58,035 | INFO     | --------------------------------------------------
[2026-01-08 21:13:59] 2026-01-09 02:12:58,035 | INFO     | 
[2026-01-08 21:13:59] 2026-01-09 02:12:58,035 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 21:13:59] 2026-01-09 02:12:58,065 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,066 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,066 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,066 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,066 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,069 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:13:59] 2026-01-09 02:12:58,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,070 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:13:59] 2026-01-09 02:12:58,070 | INFO     | job 6962931554 has completed (purged errors)
[2026-01-08 21:13:59] 2026-01-09 02:12:58,070 | INFO     | overall cleanup function is called
[2026-01-08 21:13:59] 2026-01-09 02:12:59,084 | INFO     | --- collectZombieJob: --- 10, [24775]
[2026-01-08 21:13:59] 2026-01-09 02:12:59,084 | INFO     | zombie collector waiting for pid 24775
[2026-01-08 21:13:59] 2026-01-09 02:12:59,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:13:59] 2026-01-09 02:12:59,085 | INFO     | collected zombie processes
[2026-01-08 21:13:59] 2026-01-09 02:12:59,085 | INFO     | will attempt to kill all subprocesses of pid=24775
[2026-01-08 21:13:59] 2026-01-09 02:12:59,172 | INFO     | process IDs to be killed: [24775] (in reverse order)
[2026-01-08 21:13:59] 2026-01-09 02:12:59,230 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:13:59] 2026-01-09 02:12:59,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:13:59] 2026-01-09 02:12:59,235 | INFO     | did not find any defunct processes belonging to 24775
[2026-01-08 21:13:59] 2026-01-09 02:12:59,238 | INFO     | did not find any defunct processes belonging to 24775
[2026-01-08 21:13:59] 2026-01-09 02:12:59,238 | INFO     | ready for new job
[2026-01-08 21:13:59] 2026-01-09 02:12:59,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:13:59] 2026-01-09 02:12:59,240 | INFO     | ***************************************
[2026-01-08 21:13:59] 2026-01-09 02:12:59,240 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:13:59] 2026-01-09 02:12:59,240 | INFO     | ***************************************
[2026-01-08 21:13:59] 2026-01-09 02:12:59,240 | INFO     | 
[2026-01-08 21:13:59] 2026-01-09 02:12:59,241 | INFO     | architecture information:
[2026-01-08 21:13:59] 2026-01-09 02:12:59,242 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:13:59] 2026-01-09 02:12:59,261 | INFO     | cat /etc/os-release:
[2026-01-08 21:13:59] NAME="CentOS Linux"
[2026-01-08 21:13:59] VERSION="7 (Core)"
[2026-01-08 21:13:59] ID="centos"
[2026-01-08 21:13:59] ID_LIKE="rhel fedora"
[2026-01-08 21:13:59] VERSION_ID="7"
[2026-01-08 21:13:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:13:59] ANSI_COLOR="0;31"
[2026-01-08 21:13:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:13:59] HOME_URL="https://www.centos.org/"
[2026-01-08 21:13:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:13:59] 
[2026-01-08 21:13:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:13:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:13:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:13:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:13:59] 
[2026-01-08 21:13:59] 2026-01-09 02:12:59,261 | INFO     | ***************************************
[2026-01-08 21:13:59] 2026-01-09 02:12:59,762 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 21:13:59] 2026-01-09 02:12:59,783 | INFO     | sufficient remaining disk space (18225299456 B)
[2026-01-08 21:13:59] 2026-01-09 02:12:59,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:13:59] 2026-01-09 02:12:59,784 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:13:59] 2026-01-09 02:12:59,785 | INFO     | update_server=False
[2026-01-08 21:13:59] 2026-01-09 02:12:59,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:13:59] 2026-01-09 02:12:59,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:13:59] 2026-01-09 02:12:59,786 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:13:59] 2026-01-09 02:12:59,936 | INFO     | all payload control threads have been joined
[2026-01-08 21:13:59] 2026-01-09 02:13:00,231 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 21:13:59] 2026-01-09 02:13:00,232 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 21:13:59] 2026-01-09 02:13:00,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:13:59] 2026-01-09 02:13:00,238 | INFO     | will abort loop
[2026-01-08 21:13:59] 2026-01-09 02:13:00,532 | INFO     | all job control threads have been joined
[2026-01-08 21:13:59] 2026-01-09 02:13:00,578 | INFO     | all data control threads have been joined
[2026-01-08 21:13:59] 2026-01-09 02:13:00,791 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:00,791 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:00,942 | INFO     | [payload] control thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,072 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,088 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,202 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,205 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,244 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,504 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,537 | INFO     | [job] control thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,583 | INFO     | [data] control thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,719 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,794 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:01,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:13:59] 2026-01-09 02:13:02,099 | INFO     | [job] validate thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:05,854 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:10,470 | INFO     | job.realtimelogging is not enabled
[2026-01-08 21:13:59] 2026-01-09 02:13:11,471 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:13:59] 2026-01-09 02:13:29,573 | INFO     | PID=18313 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 21:13:59] 2026-01-09 02:13:29,573 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:13:59] 2026-01-09 02:13:29,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:13:59] 2026-01-09 02:13:29,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:13:59] 2026-01-09 02:13:53,854 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:13:59] 2026-01-09 02:13:54,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140397587322688)>', '<ExcThread(monitor, started 140396684363520)>']
[2026-01-08 21:13:59] 2026-01-09 02:13:54,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:13:59] 2026-01-09 02:13:54,671 | INFO     | [monitor] control thread has ended
[2026-01-08 21:13:59] 2026-01-09 02:13:59,387 | INFO     | all workflow threads have been joined
[2026-01-08 21:13:59] 2026-01-09 02:13:59,387 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:13:59] 2026-01-09 02:13:59,388 | INFO     | traces error code: 0
[2026-01-08 21:13:59] 2026-01-09 02:13:59,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:13:59] 2026-01-09 02:13:59,509 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:13:59] 2026-01-09 02:13:59,514 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:13:59] 2026-01-09 02:13:59,518 [wrapper] pilotpid: 18313
[2026-01-08 21:13:59] 2026-01-09 02:13:59,523 [wrapper] Pilot exit status: 0
[2026-01-08 21:13:59] 2026-01-09 02:13:59,540 [wrapper] pandaids: 6962931554
[2026-01-08 21:13:59] 2026-01-09 02:13:59,596 [wrapper] cleanup supervisor_pilot 25746 18314
[2026-01-08 21:13:59] 2026-01-09 02:13:59,601 [wrapper] Test setup, not cleaning
[2026-01-08 21:13:59] 2026-01-09 02:13:59,607 [wrapper] apfmon messages muted
[2026-01-08 21:13:59] 2026-01-09 02:13:59,612 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:13:59] 2026-01-09 02:13:59,617 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:13:59]  *** Error codes and diagnostics ***
[2026-01-08 21:13:59]     "exeErrorCode": 0,
[2026-01-08 21:13:59]     "exeErrorDiag": "",
[2026-01-08 21:13:59]     "pilotErrorCode": 0,
[2026-01-08 21:13:59]     "pilotErrorDiag": "",
[2026-01-08 21:13:59]  *** Listing of results directory ***
[2026-01-08 21:13:59] total 563628
[2026-01-08 21:13:59] -rwx------ 1 boincer umatlas     36322 Jan  8 03:21 runpilot2-wrapper.sh
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 03:27 queuedata.json
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas       100 Jan  8 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:13:59] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 18:47 run_atlas
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas       105 Jan  8 18:47 job.xml
[2026-01-08 21:13:59] -rw-r--r-- 2 boincer umatlas 416162314 Jan  8 18:47 EVNT.47961981._000025.pool.root.1
[2026-01-08 21:13:59] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 18:47 start_atlas.sh
[2026-01-08 21:13:59] drwxrwx--x 2 boincer umatlas      4096 Jan  8 18:47 shared
[2026-01-08 21:13:59] -rw-r--r-- 2 boincer umatlas    592611 Jan  8 18:47 input.tar.gz
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas         0 Jan  8 18:47 boinc_lockfile
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas      2875 Jan  8 18:47 pandaJob.out
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas        57 Jan  8 18:47 setup.sh.local
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas    989837 Jan  8 18:47 agis_schedconf.cvmfs.json
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas   1516240 Jan  8 18:47 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:13:59] drwx------ 5 boincer umatlas      4096 Jan  8 18:47 pilot3
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas       529 Jan  8 21:04 boinc_task_state.xml
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas      5909 Jan  8 21:09 init_data.xml
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas 152030447 Jan  8 21:12 HITS.47961985._000686.pool.root.1
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas        95 Jan  8 21:12 pilot_heartbeat.json
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas      1054 Jan  8 21:12 memory_monitor_summary.json
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas   1279624 Jan  8 21:12 log.47961985._000686.job.log.tgz.1
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas      8626 Jan  8 21:12 heartbeat.json
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 21:13 boinc_mmap_file
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas        27 Jan  8 21:13 wrapper_checkpoint.txt
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas      5004 Jan  8 21:13 pilotlog.txt
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas   1241594 Jan  8 21:13 log.47961985._000686.job.log.1
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas       353 Jan  8 21:13 output.list
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas       620 Jan  8 21:13 runtime_log
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas   2539520 Jan  8 21:13 result.tar.gz
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas      9337 Jan  8 21:13 runtime_log.err
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas       660 Jan  8 21:13 2ZDNDmuR0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm48jKDma9FNZn.diag
[2026-01-08 21:13:59] -rw-r--r-- 1 boincer umatlas     21172 Jan  8 21:13 stderr.txt
[2026-01-08 21:13:59] HITS file was successfully produced:
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas 152030447 Jan  8 21:12 shared/HITS.pool.root.1
[2026-01-08 21:13:59]  *** Contents of shared directory: ***
[2026-01-08 21:13:59] total 557960
[2026-01-08 21:13:59] -rw-r--r-- 2 boincer umatlas 416162314 Jan  8 18:47 ATLAS.root_0
[2026-01-08 21:13:59] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 18:47 start_atlas.sh
[2026-01-08 21:13:59] -rw-r--r-- 2 boincer umatlas    592611 Jan  8 18:47 input.tar.gz
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas 152030447 Jan  8 21:12 HITS.pool.root.1
[2026-01-08 21:13:59] -rw------- 1 boincer umatlas   2539520 Jan  8 21:13 result.tar.gz
21:14:01 (14562): run_atlas exited; CPU time 63915.047971
21:14:01 (14562): called boinc_finish(0)

</stderr_txt>
]]>

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