Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:53:36 (1118692): wrapper (7.7.26015): starting
20:53:36 (1118692): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 20:53:36] Arguments: --nthreads 8
[2026-01-08 20:53:36] Threads: 8
[2026-01-08 20:53:36] Checking for CVMFS
[2026-01-08 20:53:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:53:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:53:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:53:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:53:39] 2.13.3.0 9828 92731 332656 154926 2 425 31421581 32935937 26113 16776704 0 407461116 99.707 314224548 33240 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 20:53:39] CVMFS is ok
[2026-01-08 20:53:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:53:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:53:40] Further information can be found at the LHC@home message board.
[2026-01-08 20:53:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:53:40] Checking for apptainer binary...
[2026-01-08 20:53:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:53:40] Running /usr/bin/apptainer --version
[2026-01-08 20:53:40] apptainer version 1.4.5-2.el9
[2026-01-08 20:53:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:53:41] c-4-39.aglt2.org
[2026-01-08 20:53:41] apptainer works
[2026-01-08 20:53:41] Set ATHENA_PROC_NUMBER=8
[2026-01-08 20:53:41] Set ATHENA_CORE_NUMBER=8
[2026-01-08 20:53:41] Starting ATLAS job with PandaID=6962931494
[2026-01-08 20:53:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:29:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:29:14] 2026-01-10 02:27:48,783 | INFO     | monitor loop #3345: job 0:6962931494 is in state 'finished'
[2026-01-09 21:29:14] 2026-01-10 02:27:48,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:29:14] 2026-01-10 02:27:49,142 | INFO     | time since job start (88398s) is within the limit (174528.0s)
[2026-01-09 21:29:14] 2026-01-10 02:27:51,189 | INFO     | time since job start (88400s) is within the limit (174528.0s)
[2026-01-09 21:29:14] 2026-01-10 02:27:51,303 | INFO     | monitor loop #3346: job 0:6962931494 is in state 'finished'
[2026-01-09 21:29:14] 2026-01-10 02:27:51,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:29:14] 2026-01-10 02:27:53,201 | INFO     | time since job start (88402s) is within the limit (174528.0s)
[2026-01-09 21:29:14] 2026-01-10 02:27:53,814 | INFO     | monitor loop #3347: job 0:6962931494 is in state 'finished'
[2026-01-09 21:29:14] 2026-01-10 02:27:53,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:29:14] 2026-01-10 02:27:55,207 | INFO     | time since job start (88404s) is within the limit (174528.0s)
[2026-01-09 21:29:14] 2026-01-10 02:27:56,447 | INFO     | monitor loop #3348: job 0:6962931494 is in state 'finished'
[2026-01-09 21:29:14] 2026-01-10 02:27:56,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:29:14] 2026-01-10 02:27:58,635 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:29:14] 2026-01-10 02:27:58,653 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1537749999998
[2026-01-09 21:29:14] 2026-01-10 02:27:58,760 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962931494/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:29:14] 2026-01-10 02:27:58,761 | INFO     | extracted standard info from prmon json
[2026-01-09 21:29:14] 2026-01-10 02:27:58,761 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:29:14] 2026-01-10 02:27:58,762 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:29:14] 2026-01-10 02:27:59,179 | INFO     | monitor loop #3349: job 0:6962931494 is in state 'finished'
[2026-01-09 21:29:14] 2026-01-10 02:27:59,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:29:14] 2026-01-10 02:27:59,784 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:29:14] 2026-01-10 02:27:59,906 | INFO     | sum of square deviations: 939328550171.0199
[2026-01-09 21:29:14] 2026-01-10 02:28:02,062 | INFO     | sum of deviations: -2892848743213.0063
[2026-01-09 21:29:14] 2026-01-10 02:28:02,280 | INFO     | mean x: 1767967879.4775398
[2026-01-09 21:29:14] 2026-01-10 02:28:02,281 | INFO     | mean y: 2707955.415342087
[2026-01-09 21:29:14] 2026-01-10 02:28:02,281 | INFO     | intersect: 5447516012.464598
[2026-01-09 21:29:14] 2026-01-10 02:28:02,283 | INFO     | chi2: 37.98524721530795
[2026-01-09 21:29:14] 2026-01-10 02:28:02,353 | INFO     | monitor loop #3350: job 0:6962931494 is in state 'finished'
[2026-01-09 21:29:14] 2026-01-10 02:28:02,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:29:14] 2026-01-10 02:28:02,544 | INFO     | sum of square deviations: 929624870342.8433
[2026-01-09 21:29:14] 2026-01-10 02:28:04,274 | INFO     | sum of deviations: -2414697389741.1562
[2026-01-09 21:29:14] 2026-01-10 02:28:04,275 | INFO     | mean x: 1767967726.9895978
[2026-01-09 21:29:14] 2026-01-10 02:28:04,275 | INFO     | mean y: 2715468.1893203883
[2026-01-09 21:29:14] 2026-01-10 02:28:04,275 | INFO     | intersect: 4595005532.389034
[2026-01-09 21:29:14] 2026-01-10 02:28:04,285 | INFO     | chi2: 34.41349655642722
[2026-01-09 21:29:14] 2026-01-10 02:28:04,286 | INFO     | current chi2=34.41349655642722 (change=9.402994374724843 %)
[2026-01-09 21:29:14] 2026-01-10 02:28:04,286 | INFO     | right removable region: 1441
[2026-01-09 21:29:14] 2026-01-10 02:28:04,296 | INFO     | sum of square deviations: 929621800822.8438
[2026-01-09 21:29:14] 2026-01-10 02:28:04,483 | INFO     | sum of deviations: -3421408240789.335
[2026-01-09 21:29:14] 2026-01-10 02:28:04,483 | INFO     | mean x: 1767968031.9895978
[2026-01-09 21:29:14] 2026-01-10 02:28:04,484 | INFO     | mean y: 2716259.0443828017
[2026-01-09 21:29:14] 2026-01-10 02:28:04,484 | INFO     | intersect: 6509599368.656447
[2026-01-09 21:29:14] 2026-01-10 02:28:04,486 | INFO     | chi2: 34.04573519062741
[2026-01-09 21:29:14] 2026-01-10 02:28:04,486 | INFO     | current chi2=34.04573519062741 (change=10.371163315985807 %)
[2026-01-09 21:29:14] 2026-01-10 02:28:04,486 | INFO     | left removable region: 10
[2026-01-09 21:29:14] 2026-01-10 02:28:04,488 | INFO     | sum of square deviations: 908506573565.428
[2026-01-09 21:29:14] 2026-01-10 02:28:04,644 | INFO     | sum of deviations: -3196263976853.3843
[2026-01-09 21:29:14] 2026-01-10 02:28:04,644 | INFO     | mean x: 1767968001.5150244
[2026-01-09 21:29:14] 2026-01-10 02:28:04,644 | INFO     | mean y: 2731234.2271139063
[2026-01-09 21:29:14] 2026-01-10 02:28:04,644 | INFO     | intersect: 6222710923.856713
[2026-01-09 21:29:14] 2026-01-10 02:28:04,646 | INFO     | chi2: 27.667220181189982
[2026-01-09 21:29:14] 2026-01-10 02:28:04,651 | INFO     | current memory leak: -3.52 B/s (using 1431 data points, chi2=27.67)
[2026-01-09 21:29:14] 2026-01-10 02:28:04,656 | INFO     | could have reported an average CPU frequency of 2600 MHz (50 samples)
[2026-01-09 21:29:14] 2026-01-10 02:28:04,656 | INFO     | ..............................
[2026-01-09 21:29:14] 2026-01-10 02:28:04,656 | INFO     | . Timing measurements:
[2026-01-09 21:29:14] 2026-01-10 02:28:04,656 | INFO     | . get job = 0 s
[2026-01-09 21:29:14] 2026-01-10 02:28:04,656 | INFO     | . initial setup = 4 s
[2026-01-09 21:29:14] 2026-01-10 02:28:04,656 | INFO     | . payload setup = 29 s
[2026-01-09 21:29:14] 2026-01-10 02:28:04,657 | INFO     | . stage-in = 0 s
[2026-01-09 21:29:14] 2026-01-10 02:28:04,657 | INFO     | . payload execution = 88260 s
[2026-01-09 21:29:14] 2026-01-10 02:28:04,657 | INFO     | . stage-out = 11 s
[2026-01-09 21:29:14] 2026-01-10 02:28:04,657 | INFO     | . log creation = 3 s
[2026-01-09 21:29:14] 2026-01-10 02:28:04,657 | INFO     | ..............................
[2026-01-09 21:29:14] 2026-01-10 02:28:05,210 | INFO     | 
[2026-01-09 21:29:14] 2026-01-10 02:28:05,210 | INFO     | job summary report
[2026-01-09 21:29:14] 2026-01-10 02:28:05,210 | INFO     | --------------------------------------------------
[2026-01-09 21:29:14] 2026-01-10 02:28:05,210 | INFO     | PanDA job id: 6962931494
[2026-01-09 21:29:14] 2026-01-10 02:28:05,210 | INFO     | task id: 47961985
[2026-01-09 21:29:14] 2026-01-10 02:28:05,210 | INFO     | errors: (none)
[2026-01-09 21:29:14] 2026-01-10 02:28:05,210 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:29:14] 2026-01-10 02:28:05,211 | INFO     | pilot state: finished 
[2026-01-09 21:29:14] 2026-01-10 02:28:05,211 | INFO     | transexitcode: 0
[2026-01-09 21:29:14] 2026-01-10 02:28:05,211 | INFO     | exeerrorcode: 0
[2026-01-09 21:29:14] 2026-01-10 02:28:05,211 | INFO     | exeerrordiag: 
[2026-01-09 21:29:14] 2026-01-10 02:28:05,211 | INFO     | exitcode: 0
[2026-01-09 21:29:14] 2026-01-10 02:28:05,211 | INFO     | exitmsg: OK
[2026-01-09 21:29:14] 2026-01-10 02:28:05,211 | INFO     | cpuconsumptiontime: 65302 s
[2026-01-09 21:29:14] 2026-01-10 02:28:05,211 | INFO     | nevents: 150
[2026-01-09 21:29:14] 2026-01-10 02:28:05,211 | INFO     | neventsw: 0
[2026-01-09 21:29:14] 2026-01-10 02:28:05,211 | INFO     | pid: 1152446
[2026-01-09 21:29:14] 2026-01-10 02:28:05,212 | INFO     | pgrp: 1152446
[2026-01-09 21:29:14] 2026-01-10 02:28:05,212 | INFO     | corecount: 8
[2026-01-09 21:29:14] 2026-01-10 02:28:05,212 | INFO     | event service: False
[2026-01-09 21:29:14] 2026-01-10 02:28:05,212 | INFO     | sizes: {0: 2284377, 1: 2284576, 2: 2284604, 13: 2284604, 20: 2284922, 24: 2284950, 88293: 2345566, 88294: 2345565, 88307: 2354615, 88311: 2354671, 88364: 2354917}
[2026-01-09 21:29:14] 2026-01-10 02:28:05,212 | INFO     | --------------------------------------------------
[2026-01-09 21:29:14] 2026-01-10 02:28:05,212 | INFO     | 
[2026-01-09 21:29:14] 2026-01-10 02:28:05,214 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 21:29:14] 2026-01-10 02:28:05,357 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,357 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,357 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,358 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,359 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:29:14] 2026-01-10 02:28:05,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,416 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:29:14] 2026-01-10 02:28:05,416 | INFO     | job 6962931494 has completed (purged errors)
[2026-01-09 21:29:14] 2026-01-10 02:28:05,416 | INFO     | overall cleanup function is called
[2026-01-09 21:29:14] 2026-01-10 02:28:06,783 | INFO     | --- collectZombieJob: --- 10, [1152446]
[2026-01-09 21:29:14] 2026-01-10 02:28:06,784 | INFO     | zombie collector waiting for pid 1152446
[2026-01-09 21:29:14] 2026-01-10 02:28:06,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:29:14] 2026-01-10 02:28:06,784 | INFO     | collected zombie processes
[2026-01-09 21:29:14] 2026-01-10 02:28:06,784 | INFO     | will attempt to kill all subprocesses of pid=1152446
[2026-01-09 21:29:14] 2026-01-10 02:28:13,157 | INFO     | PID=1130428 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:29:14] 2026-01-10 02:28:13,157 | INFO     | .. there are 42 such processes running
[2026-01-09 21:29:14] 2026-01-10 02:28:14,635 | INFO     | process IDs to be killed: [1152446] (in reverse order)
[2026-01-09 21:29:14] 2026-01-10 02:28:14,961 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:29:14] 2026-01-10 02:28:14,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:29:14] 2026-01-10 02:28:15,538 | INFO     | did not find any defunct processes belonging to 1152446
[2026-01-09 21:29:14] 2026-01-10 02:28:16,006 | INFO     | did not find any defunct processes belonging to 1152446
[2026-01-09 21:29:14] 2026-01-10 02:28:16,007 | INFO     | ready for new job
[2026-01-09 21:29:14] 2026-01-10 02:28:16,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:29:14] 2026-01-10 02:28:16,346 | INFO     | ***************************************
[2026-01-09 21:29:14] 2026-01-10 02:28:16,346 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:29:14] 2026-01-10 02:28:16,346 | INFO     | ***************************************
[2026-01-09 21:29:14] 2026-01-10 02:28:16,347 | INFO     | 
[2026-01-09 21:29:14] 2026-01-10 02:28:16,348 | INFO     | architecture information:
[2026-01-09 21:29:14] 2026-01-10 02:28:16,456 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:29:14] 2026-01-10 02:28:16,742 | INFO     | cat /etc/os-release:
[2026-01-09 21:29:14] NAME="CentOS Linux"
[2026-01-09 21:29:14] VERSION="7 (Core)"
[2026-01-09 21:29:14] ID="centos"
[2026-01-09 21:29:14] ID_LIKE="rhel fedora"
[2026-01-09 21:29:14] VERSION_ID="7"
[2026-01-09 21:29:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:29:14] ANSI_COLOR="0;31"
[2026-01-09 21:29:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:29:14] HOME_URL="https://www.centos.org/"
[2026-01-09 21:29:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:29:14] 
[2026-01-09 21:29:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:29:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:29:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:29:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:29:14] 
[2026-01-09 21:29:14] 2026-01-10 02:28:16,742 | INFO     | ***************************************
[2026-01-09 21:29:14] 2026-01-10 02:28:17,260 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 21:29:14] 2026-01-10 02:28:17,400 | INFO     | sufficient remaining disk space (74381787136 B)
[2026-01-09 21:29:14] 2026-01-10 02:28:17,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:29:14] 2026-01-10 02:28:17,401 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:29:14] 2026-01-10 02:28:17,401 | INFO     | update_server=False
[2026-01-09 21:29:14] 2026-01-10 02:28:17,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:29:14] 2026-01-10 02:28:17,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:29:14] 2026-01-10 02:28:17,402 | INFO     | aborting loop
[2026-01-09 21:29:14] 2026-01-10 02:28:17,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:29:14] 2026-01-10 02:28:17,744 | INFO     | all data control threads have been joined
[2026-01-09 21:29:14] 2026-01-10 02:28:18,331 | INFO     | all payload control threads have been joined
[2026-01-09 21:29:14] 2026-01-10 02:28:18,404 | INFO     | all job control threads have been joined
[2026-01-09 21:29:14] 2026-01-10 02:28:18,407 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:18,407 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:18,441 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:18,758 | INFO     | [data] control thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:18,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:29:14] 2026-01-10 02:28:19,062 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:19,336 | INFO     | [payload] control thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:19,362 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:19,363 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:19,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:29:14] 2026-01-10 02:28:19,364 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:19,386 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:19,387 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:19,417 | INFO     | [job] control thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:19,443 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:19,791 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:19,851 | INFO     | [job] validate thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:23,388 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:29:14] 2026-01-10 02:28:59,050 | INFO     | PID=1130428 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:29:14] 2026-01-10 02:28:59,050 | INFO     | .. there are 43 such processes running
[2026-01-09 21:29:14] 2026-01-10 02:28:59,055 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:29:14] 2026-01-10 02:28:59,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:29:14] 2026-01-10 02:28:59,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:29:14] 2026-01-10 02:29:00,360 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:29:14] 2026-01-10 02:29:01,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139691038357312)>', '<ExcThread(monitor, started 139690690721536)>']
[2026-01-09 21:29:14] 2026-01-10 02:29:02,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:29:14] 2026-01-10 02:29:02,102 | INFO     | [monitor] control thread has ended
[2026-01-09 21:29:14] 2026-01-10 02:29:06,194 | INFO     | all workflow threads have been joined
[2026-01-09 21:29:14] 2026-01-10 02:29:06,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:29:14] 2026-01-10 02:29:06,195 | INFO     | traces error code: 0
[2026-01-09 21:29:14] 2026-01-10 02:29:06,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:29:14] 2026-01-10 02:29:11,549 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:29:14] 2026-01-10 02:29:11,586 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:29:14] 2026-01-10 02:29:11,631 [wrapper] pilotpid: 1130428
[2026-01-09 21:29:14] 2026-01-10 02:29:11,712 [wrapper] Pilot exit status: 0
[2026-01-09 21:29:14] 2026-01-10 02:29:11,926 [wrapper] pandaids: 6962931494
[2026-01-09 21:29:14] 2026-01-10 02:29:12,235 [wrapper] cleanup supervisor_pilot  616902 1130429
[2026-01-09 21:29:14] 2026-01-10 02:29:12,266 [wrapper] Test setup, not cleaning
[2026-01-09 21:29:14] 2026-01-10 02:29:12,359 [wrapper] apfmon messages muted
[2026-01-09 21:29:14] 2026-01-10 02:29:12,393 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:29:14] 2026-01-10 02:29:12,430 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:29:14]  *** Error codes and diagnostics ***
[2026-01-09 21:29:14]     "exeErrorCode": 0,
[2026-01-09 21:29:14]     "exeErrorDiag": "",
[2026-01-09 21:29:14]     "pilotErrorCode": 0,
[2026-01-09 21:29:14]     "pilotErrorDiag": "",
[2026-01-09 21:29:14]  *** Listing of results directory ***
[2026-01-09 21:29:14] total 573192
[2026-01-09 21:29:14] -rwx------. 1 boincer umatlas     36322 Jan  8 03:21 runpilot2-wrapper.sh
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:27 queuedata.json
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas       100 Jan  8 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:29:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 20:53 run_atlas
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas       105 Jan  8 20:53 job.xml
[2026-01-09 21:29:14] -rw-r--r--. 2 boincer umatlas 412828867 Jan  8 20:53 EVNT.47961981._000024.pool.root.1
[2026-01-09 21:29:14] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 20:53 shared
[2026-01-09 21:29:14] -rw-r--r--. 2 boincer umatlas    592606 Jan  8 20:53 input.tar.gz
[2026-01-09 21:29:14] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:53 start_atlas.sh
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas         0 Jan  8 20:53 boinc_lockfile
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas      2875 Jan  8 20:53 pandaJob.out
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas        57 Jan  8 20:53 setup.sh.local
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas    989821 Jan  8 20:54 agis_schedconf.cvmfs.json
[2026-01-09 21:29:14] drwx------. 5 boincer umatlas      4096 Jan  8 20:54 pilot3
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas       531 Jan  9 18:30 boinc_task_state.xml
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas 149365791 Jan  9 21:24 HITS.47961985._000626.pool.root.1
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas      1063 Jan  9 21:26 memory_monitor_summary.json
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas   2017411 Jan  9 21:27 log.47961985._000626.job.log.tgz.1
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas      6659 Jan  9 21:27 init_data.xml
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas      8610 Jan  9 21:28 heartbeat.json
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas        95 Jan  9 21:28 pilot_heartbeat.json
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas      4824 Jan  9 21:29 pilotlog.txt
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:29 boinc_mmap_file
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas        28 Jan  9 21:29 wrapper_checkpoint.txt
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas   8400846 Jan  9 21:29 log.47961985._000626.job.log.1
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas       353 Jan  9 21:29 output.list
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:29 runtime_log
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas  10434560 Jan  9 21:29 result.tar.gz
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas      9333 Jan  9 21:29 runtime_log.err
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas       659 Jan  9 21:29 kF1LDmuR0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm77jKDmjEY3rm.diag
[2026-01-09 21:29:14] -rw-r--r--. 1 boincer umatlas     21806 Jan  9 21:29 stderr.txt
[2026-01-09 21:29:14] HITS file was successfully produced:
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas 149365791 Jan  9 21:24 shared/HITS.pool.root.1
[2026-01-09 21:29:14]  *** Contents of shared directory: ***
[2026-01-09 21:29:14] total 559816
[2026-01-09 21:29:14] -rw-r--r--. 2 boincer umatlas 412828867 Jan  8 20:53 ATLAS.root_0
[2026-01-09 21:29:14] -rw-r--r--. 2 boincer umatlas    592606 Jan  8 20:53 input.tar.gz
[2026-01-09 21:29:14] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:53 start_atlas.sh
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas 149365791 Jan  9 21:24 HITS.pool.root.1
[2026-01-09 21:29:14] -rw-------. 1 boincer umatlas  10434560 Jan  9 21:29 result.tar.gz
21:29:15 (1118692): run_atlas exited; CPU time 67847.564236
21:29:15 (1118692): called boinc_finish(0)

</stderr_txt>
]]>

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