Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:21:24 (6667): wrapper (7.7.26015): starting
18:21:24 (6667): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 18:21:24] Arguments: --nthreads 8
[2026-01-08 18:21:24] Threads: 8
[2026-01-08 18:21:24] Checking for CVMFS
[2026-01-08 18:21:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 18:21:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 18:21:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 18:21:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 18:21:24] 2.11.2.0 2893 128287 81600 154924 1 56 18116584 20275200 1 130560 0 31728710 99.821 8179932 33229 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 18:21:24] CVMFS is ok
[2026-01-08 18:21:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 18:21:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 18:21:24] Further information can be found at the LHC@home message board.
[2026-01-08 18:21:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 18:21:24] Checking for apptainer binary...
[2026-01-08 18:21:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 18:21:24] Running /usr/bin/apptainer --version
[2026-01-08 18:21:24] apptainer version 1.3.2-1.el7
[2026-01-08 18:21:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 18:21:26] c-204-22.aglt2.org
[2026-01-08 18:21:26] apptainer works
[2026-01-08 18:21:26] Set ATHENA_PROC_NUMBER=8
[2026-01-08 18:21:26] Set ATHENA_CORE_NUMBER=8
[2026-01-08 18:21:26] Starting ATLAS job with PandaID=6962930953
[2026-01-08 18:21:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:00:06]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:00:06] 2026-01-09 01:59:01,706 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962930953/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:00:06] 2026-01-09 01:59:01,795 | INFO     | number of running child processes to parent process 16878: 1
[2026-01-08 21:00:06] 2026-01-09 01:59:01,796 | INFO     | maximum number of monitored processes: 16
[2026-01-08 21:00:06] 2026-01-09 01:59:02,129 | INFO     | PID=10366 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 21:00:06] 2026-01-09 01:59:02,982 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 21:00:06] 2026-01-09 01:59:02,985 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2026-01-08 21:00:06] 2026-01-09 01:59:02,986 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962930953/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:00:06] 2026-01-09 01:59:02,987 | INFO     | extracted standard info from prmon json
[2026-01-08 21:00:06] 2026-01-09 01:59:02,987 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:00:06] 2026-01-09 01:59:02,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:00:06] 2026-01-09 01:59:02,990 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:00:06] 2026-01-09 01:59:02,991 | INFO     | sum of square deviations: 1154697340.774199
[2026-01-08 21:00:06] 2026-01-09 01:59:02,991 | INFO     | sum of deviations: -1098032793.6451435
[2026-01-08 21:00:06] 2026-01-09 01:59:02,992 | INFO     | mean x: 1767919235.387097
[2026-01-08 21:00:06] 2026-01-09 01:59:02,992 | INFO     | mean y: 2601832.077419355
[2026-01-08 21:00:06] 2026-01-09 01:59:02,992 | INFO     | intersect: 1683763837.4125369
[2026-01-08 21:00:06] 2026-01-09 01:59:02,992 | INFO     | chi2: 5.169046138628894
[2026-01-08 21:00:06] 2026-01-09 01:59:02,992 | INFO     | sum of square deviations: 1046536867.5000013
[2026-01-08 21:00:06] 2026-01-09 01:59:02,993 | INFO     | sum of deviations: 38284876503.7
[2026-01-08 21:00:06] 2026-01-09 01:59:02,993 | INFO     | mean x: 1767919082.9
[2026-01-08 21:00:06] 2026-01-09 01:59:02,993 | INFO     | mean y: 2656981.78
[2026-01-08 21:00:06] 2026-01-09 01:59:02,994 | INFO     | intersect: -64672144125.846504
[2026-01-08 21:00:06] 2026-01-09 01:59:02,994 | INFO     | chi2: 2.675261477855703
[2026-01-08 21:00:06] 2026-01-09 01:59:02,994 | INFO     | current chi2=2.675261477855703 (change=48.24458118368963 %)
[2026-01-08 21:00:06] 2026-01-09 01:59:02,994 | INFO     | sum of square deviations: 945353269.1724131
[2026-01-08 21:00:06] 2026-01-09 01:59:02,995 | INFO     | sum of deviations: 47708727608.93103
[2026-01-08 21:00:06] 2026-01-09 01:59:02,995 | INFO     | mean x: 1767918930.413793
[2026-01-08 21:00:06] 2026-01-09 01:59:02,995 | INFO     | mean y: 2671020.0344827585
[2026-01-08 21:00:06] 2026-01-09 01:59:02,995 | INFO     | intersect: -89218115998.15852
[2026-01-08 21:00:06] 2026-01-09 01:59:02,996 | INFO     | chi2: 2.4528205290693914
[2026-01-08 21:00:06] 2026-01-09 01:59:02,996 | INFO     | current chi2=2.4528205290693914 (change=8.314736732373696 %)
[2026-01-08 21:00:06] 2026-01-09 01:59:02,996 | INFO     | right removable region: 144
[2026-01-08 21:00:06] 2026-01-09 01:59:02,996 | INFO     | sum of square deviations: 1046500267.5000013
[2026-01-08 21:00:06] 2026-01-09 01:59:02,997 | INFO     | sum of deviations: -37332779304.0
[2026-01-08 21:00:06] 2026-01-09 01:59:02,997 | INFO     | mean x: 1767919387.9
[2026-01-08 21:00:06] 2026-01-09 01:59:02,997 | INFO     | mean y: 2652420.2666666666
[2026-01-08 21:00:06] 2026-01-09 01:59:02,997 | INFO     | intersect: 63071288315.98888
[2026-01-08 21:00:06] 2026-01-09 01:59:02,998 | INFO     | chi2: 2.8697041682437847
[2026-01-08 21:00:06] 2026-01-09 01:59:02,998 | INFO     | current chi2=2.8697041682437847 (change=44.482906685662066 %)
[2026-01-08 21:00:06] 2026-01-09 01:59:02,998 | INFO     | sum of square deviations: 945298002.8000013
[2026-01-08 21:00:06] 2026-01-09 01:59:02,999 | INFO     | sum of deviations: -41688525977.40001
[2026-01-08 21:00:06] 2026-01-09 01:59:02,999 | INFO     | mean x: 1767919540.4
[2026-01-08 21:00:06] 2026-01-09 01:59:02,999 | INFO     | mean y: 2658962.8
[2026-01-08 21:00:06] 2026-01-09 01:59:02,999 | INFO     | intersect: 77969564073.79257
[2026-01-08 21:00:06] 2026-01-09 01:59:02,999 | INFO     | chi2: 2.818918188813459
[2026-01-08 21:00:06] 2026-01-09 01:59:03,000 | INFO     | current chi2=2.818918188813459 (change=1.7697287404159794 %)
[2026-01-08 21:00:06] 2026-01-09 01:59:03,000 | INFO     | left removable region: 20
[2026-01-08 21:00:06] 2026-01-09 01:59:03,000 | INFO     | sum of square deviations: 591200928.6048379
[2026-01-08 21:00:06] 2026-01-09 01:59:03,001 | INFO     | sum of deviations: 2822414983.2016125
[2026-01-08 21:00:06] 2026-01-09 01:59:03,001 | INFO     | mean x: 1767919509.9435484
[2026-01-08 21:00:06] 2026-01-09 01:59:03,001 | INFO     | mean y: 2743920.314516129
[2026-01-08 21:00:06] 2026-01-09 01:59:03,001 | INFO     | intersect: -8437368861.196921
[2026-01-08 21:00:06] 2026-01-09 01:59:03,001 | INFO     | chi2: 0.026993448106462044
[2026-01-08 21:00:06] 2026-01-09 01:59:03,001 | INFO     | current memory leak: 4.77 B/s (using 124 data points, chi2=0.03)
[2026-01-08 21:00:06] 2026-01-09 01:59:03,002 | INFO     | could have reported an average CPU frequency of 1956 MHz (9 samples)
[2026-01-08 21:00:06] 2026-01-09 01:59:03,002 | INFO     | ..............................
[2026-01-08 21:00:06] 2026-01-09 01:59:03,002 | INFO     | . Timing measurements:
[2026-01-08 21:00:06] 2026-01-09 01:59:03,002 | INFO     | . get job = 0 s
[2026-01-08 21:00:06] 2026-01-09 01:59:03,002 | INFO     | . initial setup = 2 s
[2026-01-08 21:00:06] 2026-01-09 01:59:03,002 | INFO     | . payload setup = 10 s
[2026-01-08 21:00:06] 2026-01-09 01:59:03,002 | INFO     | . stage-in = 0 s
[2026-01-08 21:00:06] 2026-01-09 01:59:03,003 | INFO     | . payload execution = 9400 s
[2026-01-08 21:00:06] 2026-01-09 01:59:03,003 | INFO     | . stage-out = 1 s
[2026-01-08 21:00:06] 2026-01-09 01:59:03,003 | INFO     | . log creation = 0 s
[2026-01-08 21:00:06] 2026-01-09 01:59:03,003 | INFO     | ..............................
[2026-01-08 21:00:06] 2026-01-09 01:59:03,091 | INFO     | 
[2026-01-08 21:00:06] 2026-01-09 01:59:03,092 | INFO     | job summary report
[2026-01-08 21:00:06] 2026-01-09 01:59:03,092 | INFO     | --------------------------------------------------
[2026-01-08 21:00:06] 2026-01-09 01:59:03,092 | INFO     | PanDA job id: 6962930953
[2026-01-08 21:00:06] 2026-01-09 01:59:03,092 | INFO     | task id: 47961985
[2026-01-08 21:00:06] 2026-01-09 01:59:03,092 | INFO     | errors: (none)
[2026-01-08 21:00:06] 2026-01-09 01:59:03,093 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:00:06] 2026-01-09 01:59:03,093 | INFO     | pilot state: finished 
[2026-01-08 21:00:06] 2026-01-09 01:59:03,093 | INFO     | transexitcode: 0
[2026-01-08 21:00:06] 2026-01-09 01:59:03,093 | INFO     | exeerrorcode: 0
[2026-01-08 21:00:06] 2026-01-09 01:59:03,093 | INFO     | exeerrordiag: 
[2026-01-08 21:00:06] 2026-01-09 01:59:03,094 | INFO     | exitcode: 0
[2026-01-08 21:00:06] 2026-01-09 01:59:03,094 | INFO     | exitmsg: OK
[2026-01-08 21:00:06] 2026-01-09 01:59:03,094 | INFO     | cpuconsumptiontime: 69370 s
[2026-01-08 21:00:06] 2026-01-09 01:59:03,094 | INFO     | nevents: 150
[2026-01-08 21:00:06] 2026-01-09 01:59:03,094 | INFO     | neventsw: 0
[2026-01-08 21:00:06] 2026-01-09 01:59:03,094 | INFO     | pid: 16878
[2026-01-08 21:00:06] 2026-01-09 01:59:03,095 | INFO     | pgrp: 16878
[2026-01-08 21:00:06] 2026-01-09 01:59:03,095 | INFO     | corecount: 8
[2026-01-08 21:00:06] 2026-01-09 01:59:03,095 | INFO     | event service: False
[2026-01-08 21:00:06] 2026-01-09 01:59:03,095 | INFO     | sizes: {0: 2284548, 6: 2284810, 11: 2284838, 9415: 2314087, 9416: 2323137, 9422: 2323391}
[2026-01-08 21:00:06] 2026-01-09 01:59:03,095 | INFO     | --------------------------------------------------
[2026-01-08 21:00:06] 2026-01-09 01:59:03,095 | INFO     | 
[2026-01-08 21:00:06] 2026-01-09 01:59:03,096 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 21:00:06] 2026-01-09 01:59:03,123 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,124 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,124 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,125 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,125 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,126 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,126 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,126 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,127 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,127 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,128 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:00:06] 2026-01-09 01:59:03,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,128 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:00:06] 2026-01-09 01:59:03,129 | INFO     | job 6962930953 has completed (purged errors)
[2026-01-08 21:00:06] 2026-01-09 01:59:03,129 | INFO     | overall cleanup function is called
[2026-01-08 21:00:06] 2026-01-09 01:59:04,144 | INFO     | --- collectZombieJob: --- 10, [16878]
[2026-01-08 21:00:06] 2026-01-09 01:59:04,144 | INFO     | zombie collector waiting for pid 16878
[2026-01-08 21:00:06] 2026-01-09 01:59:04,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:00:06] 2026-01-09 01:59:04,145 | INFO     | collected zombie processes
[2026-01-08 21:00:06] 2026-01-09 01:59:04,145 | INFO     | will attempt to kill all subprocesses of pid=16878
[2026-01-08 21:00:06] 2026-01-09 01:59:04,241 | INFO     | process IDs to be killed: [16878] (in reverse order)
[2026-01-08 21:00:06] 2026-01-09 01:59:04,299 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:00:06] 2026-01-09 01:59:04,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:00:06] 2026-01-09 01:59:04,305 | INFO     | did not find any defunct processes belonging to 16878
[2026-01-08 21:00:06] 2026-01-09 01:59:04,308 | INFO     | did not find any defunct processes belonging to 16878
[2026-01-08 21:00:06] 2026-01-09 01:59:04,308 | INFO     | ready for new job
[2026-01-08 21:00:06] 2026-01-09 01:59:04,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:00:06] 2026-01-09 01:59:04,310 | INFO     | ***************************************
[2026-01-08 21:00:06] 2026-01-09 01:59:04,310 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:00:06] 2026-01-09 01:59:04,310 | INFO     | ***************************************
[2026-01-08 21:00:06] 2026-01-09 01:59:04,310 | INFO     | 
[2026-01-08 21:00:06] 2026-01-09 01:59:04,311 | INFO     | architecture information:
[2026-01-08 21:00:06] 2026-01-09 01:59:04,312 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:00:06] 2026-01-09 01:59:04,329 | INFO     | cat /etc/os-release:
[2026-01-08 21:00:06] NAME="CentOS Linux"
[2026-01-08 21:00:06] VERSION="7 (Core)"
[2026-01-08 21:00:06] ID="centos"
[2026-01-08 21:00:06] ID_LIKE="rhel fedora"
[2026-01-08 21:00:06] VERSION_ID="7"
[2026-01-08 21:00:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:00:06] ANSI_COLOR="0;31"
[2026-01-08 21:00:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:00:06] HOME_URL="https://www.centos.org/"
[2026-01-08 21:00:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:00:06] 
[2026-01-08 21:00:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:00:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:00:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:00:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:00:06] 
[2026-01-08 21:00:06] 2026-01-09 01:59:04,330 | INFO     | ***************************************
[2026-01-08 21:00:06] 2026-01-09 01:59:04,833 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 21:00:06] 2026-01-09 01:59:04,853 | INFO     | sufficient remaining disk space (18196987904 B)
[2026-01-08 21:00:06] 2026-01-09 01:59:04,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:00:06] 2026-01-09 01:59:04,854 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:00:06] 2026-01-09 01:59:04,854 | INFO     | update_server=False
[2026-01-08 21:00:06] 2026-01-09 01:59:04,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:00:06] 2026-01-09 01:59:04,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:00:06] 2026-01-09 01:59:04,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:00:06] 2026-01-09 01:59:05,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:00:06] 2026-01-09 01:59:05,305 | INFO     | aborting loop
[2026-01-08 21:00:06] 2026-01-09 01:59:05,452 | INFO     | all payload control threads have been joined
[2026-01-08 21:00:06] 2026-01-09 01:59:05,694 | INFO     | all data control threads have been joined
[2026-01-08 21:00:06] 2026-01-09 01:59:05,796 | INFO     | all job control threads have been joined
[2026-01-08 21:00:06] 2026-01-09 01:59:05,860 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:05,860 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:06,119 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:06,311 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:06,450 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:06,453 | INFO     | [payload] control thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:06,700 | INFO     | [data] control thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:06,801 | INFO     | [job] control thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:06,957 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:06,990 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:07,031 | INFO     | [job] validate thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:07,179 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:07,279 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:07,380 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:07,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:00:06] 2026-01-09 01:59:11,747 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:15,741 | INFO     | job.realtimelogging is not enabled
[2026-01-08 21:00:06] 2026-01-09 01:59:16,747 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:00:06] 2026-01-09 01:59:34,339 | INFO     | PID=10366 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 21:00:06] 2026-01-09 01:59:34,339 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:00:06] 2026-01-09 01:59:34,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:00:06] 2026-01-09 01:59:34,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:00:06] 2026-01-09 01:59:59,193 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:00:06] 2026-01-09 02:00:00,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139813288552256)>', '<ExcThread(monitor, started 139812317161216)>']
[2026-01-08 21:00:06] 2026-01-09 02:00:01,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:00:06] 2026-01-09 02:00:01,482 | INFO     | [monitor] control thread has ended
[2026-01-08 21:00:06] 2026-01-09 02:00:05,681 | INFO     | all workflow threads have been joined
[2026-01-08 21:00:06] 2026-01-09 02:00:05,681 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:00:06] 2026-01-09 02:00:05,684 | INFO     | traces error code: 0
[2026-01-08 21:00:06] 2026-01-09 02:00:05,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:00:06] 2026-01-09 02:00:05,813 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:00:06] 2026-01-09 02:00:05,817 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:00:06] 2026-01-09 02:00:05,822 [wrapper] pilotpid: 10366
[2026-01-08 21:00:06] 2026-01-09 02:00:05,827 [wrapper] Pilot exit status: 0
[2026-01-08 21:00:06] 2026-01-09 02:00:05,845 [wrapper] pandaids: 6962930953
[2026-01-08 21:00:06] 2026-01-09 02:00:05,893 [wrapper] cleanup supervisor_pilot 20039 10367
[2026-01-08 21:00:06] 2026-01-09 02:00:05,898 [wrapper] Test setup, not cleaning
[2026-01-08 21:00:06] 2026-01-09 02:00:05,904 [wrapper] apfmon messages muted
[2026-01-08 21:00:06] 2026-01-09 02:00:05,909 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:00:06] 2026-01-09 02:00:05,914 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:00:06]  *** Error codes and diagnostics ***
[2026-01-08 21:00:06]     "exeErrorCode": 0,
[2026-01-08 21:00:06]     "exeErrorDiag": "",
[2026-01-08 21:00:06]     "pilotErrorCode": 0,
[2026-01-08 21:00:06]     "pilotErrorDiag": "",
[2026-01-08 21:00:06]  *** Listing of results directory ***
[2026-01-08 21:00:06] total 557944
[2026-01-08 21:00:06] -rwx------ 1 boincer umatlas     36322 Jan  8 03:17 runpilot2-wrapper.sh
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 03:27 queuedata.json
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas       100 Jan  8 18:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:00:06] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 18:21 run_atlas
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas       105 Jan  8 18:21 job.xml
[2026-01-08 21:00:06] -rw-r--r-- 2 boincer umatlas 413081581 Jan  8 18:21 EVNT.47961981._000020.pool.root.1
[2026-01-08 21:00:06] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 18:21 start_atlas.sh
[2026-01-08 21:00:06] drwxrwx--x 2 boincer umatlas      4096 Jan  8 18:21 shared
[2026-01-08 21:00:06] -rw-r--r-- 2 boincer umatlas    592604 Jan  8 18:21 input.tar.gz
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas         0 Jan  8 18:21 boinc_lockfile
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas      2875 Jan  8 18:21 pandaJob.out
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas        57 Jan  8 18:21 setup.sh.local
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas    989837 Jan  8 18:21 agis_schedconf.cvmfs.json
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas   1516240 Jan  8 18:21 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:00:06] drwx------ 5 boincer umatlas      4096 Jan  8 18:21 pilot3
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas       530 Jan  8 20:49 boinc_task_state.xml
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas      5909 Jan  8 20:54 init_data.xml
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas 149030384 Jan  8 20:58 HITS.47961985._000325.pool.root.1
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas      1055 Jan  8 20:58 memory_monitor_summary.json
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas        95 Jan  8 20:58 pilot_heartbeat.json
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas   1307904 Jan  8 20:58 log.47961985._000325.job.log.tgz.1
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas      8625 Jan  8 20:59 heartbeat.json
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 20:59 boinc_mmap_file
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas        27 Jan  8 20:59 wrapper_checkpoint.txt
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas      4818 Jan  8 21:00 pilotlog.txt
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas   1343561 Jan  8 21:00 log.47961985._000325.job.log.1
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas       353 Jan  8 21:00 output.list
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas       620 Jan  8 21:00 runtime_log
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas   2672640 Jan  8 21:00 result.tar.gz
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas      9342 Jan  8 21:00 runtime_log.err
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas       662 Jan  8 21:00 qDkKDmQO0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH1jKDmgGMh7n.diag
[2026-01-08 21:00:06] -rw-r--r-- 1 boincer umatlas     21212 Jan  8 21:00 stderr.txt
[2026-01-08 21:00:06] HITS file was successfully produced:
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas 149030384 Jan  8 20:58 shared/HITS.pool.root.1
[2026-01-08 21:00:06]  *** Contents of shared directory: ***
[2026-01-08 21:00:06] total 552148
[2026-01-08 21:00:06] -rw-r--r-- 2 boincer umatlas 413081581 Jan  8 18:21 ATLAS.root_0
[2026-01-08 21:00:06] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 18:21 start_atlas.sh
[2026-01-08 21:00:06] -rw-r--r-- 2 boincer umatlas    592604 Jan  8 18:21 input.tar.gz
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas 149030384 Jan  8 20:58 HITS.pool.root.1
[2026-01-08 21:00:06] -rw------- 1 boincer umatlas   2672640 Jan  8 21:00 result.tar.gz
21:00:07 (6667): run_atlas exited; CPU time 68622.496592
21:00:07 (6667): called boinc_finish(0)

</stderr_txt>
]]>

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