Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
16:24:42 (2835133): wrapper (7.7.26015): starting
16:24:42 (2835133): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 16:24:42] Arguments: --nthreads 12
[2026-01-09 16:24:42] Threads: 12
[2026-01-09 16:24:42] Checking for CVMFS
[2026-01-09 16:24:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:24:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:24:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:24:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:24:43] 2.12.7.0 2330541 2308 64716 154948 1 56 3055687 4096001 0 130560 0 1371936 99.942 89446 43 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-09 16:24:43] CVMFS is ok
[2026-01-09 16:24:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:24:43] Checking for apptainer binary...
[2026-01-09 16:24:43] apptainer is not installed, using version from CVMFS
[2026-01-09 16:24:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:24:43] lithium
[2026-01-09 16:24:43] apptainer works
[2026-01-09 16:24:43] Set ATHENA_PROC_NUMBER=12
[2026-01-09 16:24:43] Set ATHENA_CORE_NUMBER=12
[2026-01-09 16:24:43] Starting ATLAS job with PandaID=6962922872
[2026-01-09 16:24:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:41:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:41:11] 2026-01-09 17:40:35,893 | INFO     | monitor loop #618: job 0:6962922872 is in state 'finished'
[2026-01-09 18:41:11] 2026-01-09 17:40:35,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:41:11] 2026-01-09 17:40:36,405 | INFO     | time since job start (8145s) is within the limit (174528.0s)
[2026-01-09 18:41:11] 2026-01-09 17:40:37,503 | INFO     | PID=2838969 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 18:41:11] 2026-01-09 17:40:38,397 | INFO     | monitor loop #619: job 0:6962922872 is in state 'finished'
[2026-01-09 18:41:11] 2026-01-09 17:40:38,397 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,503 | INFO     | time since job start (8147s) is within the limit (174528.0s)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,848 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 18:41:11] 2026-01-09 17:40:38,849 | INFO     | found 8 cores (4 cores per socket, 2 sockets) HT, CPU MHz: 2262.8041250000006
[2026-01-09 18:41:11] 2026-01-09 17:40:38,851 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6962922872/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,852 | INFO     | extracted standard info from prmon json
[2026-01-09 18:41:11] 2026-01-09 17:40:38,852 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:41:11] 2026-01-09 17:40:38,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:41:11] 2026-01-09 17:40:38,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:41:11] 2026-01-09 17:40:38,853 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:41:11] 2026-01-09 17:40:38,855 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:41:11] 2026-01-09 17:40:38,855 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,855 | INFO     | sum of deviations: -18817937153.0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,855 | INFO     | mean x: 1767976308.5
[2026-01-09 18:41:11] 2026-01-09 17:40:38,856 | INFO     | mean y: 2806862.909090909
[2026-01-09 18:41:11] 2026-01-09 17:40:38,856 | INFO     | intersect: 46655117956.126434
[2026-01-09 18:41:11] 2026-01-09 17:40:38,856 | INFO     | chi2: 1.6618866592861727
[2026-01-09 18:41:11] 2026-01-09 17:40:38,856 | INFO     | sum of square deviations: 635130048.0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,857 | INFO     | sum of deviations: -17059488567.0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,857 | INFO     | mean x: 1767976156.0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,857 | INFO     | mean y: 2810302.2913385825
[2026-01-09 18:41:11] 2026-01-09 17:40:38,857 | INFO     | intersect: 47490358899.5994
[2026-01-09 18:41:11] 2026-01-09 17:40:38,857 | INFO     | chi2: 1.6604724612317048
[2026-01-09 18:41:11] 2026-01-09 17:40:38,857 | INFO     | current chi2=1.6604724612317048 (change=0.08509593879737871 %)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,858 | INFO     | right removable region: 126
[2026-01-09 18:41:11] 2026-01-09 17:40:38,858 | INFO     | sum of square deviations: 635130048.0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,858 | INFO     | sum of deviations: -39255833067.0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,858 | INFO     | mean x: 1767976461.0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,858 | INFO     | mean y: 2846100.590551181
[2026-01-09 18:41:11] 2026-01-09 17:40:38,859 | INFO     | intersect: 109277142030.92801
[2026-01-09 18:41:11] 2026-01-09 17:40:38,859 | INFO     | chi2: 0.24800090173912787
[2026-01-09 18:41:11] 2026-01-09 17:40:38,859 | INFO     | current chi2=0.24800090173912787 (change=85.07714708741622 %)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,859 | INFO     | sum of square deviations: 563026370.5
[2026-01-09 18:41:11] 2026-01-09 17:40:38,860 | INFO     | sum of deviations: -39131698555.0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,860 | INFO     | mean x: 1767976613.5
[2026-01-09 18:41:11] 2026-01-09 17:40:38,860 | INFO     | mean y: 2845660.6721311477
[2026-01-09 18:41:11] 2026-01-09 17:40:38,860 | INFO     | intersect: 122881509106.45782
[2026-01-09 18:41:11] 2026-01-09 17:40:38,860 | INFO     | chi2: 0.19279425496811536
[2026-01-09 18:41:11] 2026-01-09 17:40:38,860 | INFO     | current chi2=0.19279425496811536 (change=22.2606637249587 %)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,860 | INFO     | left removable region: 20
[2026-01-09 18:41:11] 2026-01-09 17:40:38,860 | INFO     | sum of square deviations: 369281342.5
[2026-01-09 18:41:11] 2026-01-09 17:40:38,861 | INFO     | sum of deviations: -27618403920.000008
[2026-01-09 18:41:11] 2026-01-09 17:40:38,861 | INFO     | mean x: 1767976735.5
[2026-01-09 18:41:11] 2026-01-09 17:40:38,861 | INFO     | mean y: 2828929.0566037735
[2026-01-09 18:41:11] 2026-01-09 17:40:38,861 | INFO     | intersect: 132229101915.49112
[2026-01-09 18:41:11] 2026-01-09 17:40:38,861 | INFO     | chi2: 0.1788974719222606
[2026-01-09 18:41:11] 2026-01-09 17:40:38,861 | INFO     | current memory leak: -74.79 B/s (using 106 data points, chi2=0.18)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,862 | INFO     | could have reported an average CPU frequency of 2669 MHz (8 samples)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,862 | INFO     | ..............................
[2026-01-09 18:41:11] 2026-01-09 17:40:38,862 | INFO     | . Timing measurements:
[2026-01-09 18:41:11] 2026-01-09 17:40:38,862 | INFO     | . get job = 0 s
[2026-01-09 18:41:11] 2026-01-09 17:40:38,862 | INFO     | . initial setup = 1 s
[2026-01-09 18:41:11] 2026-01-09 17:40:38,862 | INFO     | . payload setup = 4 s
[2026-01-09 18:41:11] 2026-01-09 17:40:38,862 | INFO     | . stage-in = 0 s
[2026-01-09 18:41:11] 2026-01-09 17:40:38,862 | INFO     | . payload execution = 8045 s
[2026-01-09 18:41:11] 2026-01-09 17:40:38,863 | INFO     | . stage-out = 0 s
[2026-01-09 18:41:11] 2026-01-09 17:40:38,863 | INFO     | . log creation = 0 s
[2026-01-09 18:41:11] 2026-01-09 17:40:38,863 | INFO     | ..............................
[2026-01-09 18:41:11] 2026-01-09 17:40:38,934 | INFO     | 
[2026-01-09 18:41:11] 2026-01-09 17:40:38,934 | INFO     | job summary report
[2026-01-09 18:41:11] 2026-01-09 17:40:38,934 | INFO     | --------------------------------------------------
[2026-01-09 18:41:11] 2026-01-09 17:40:38,934 | INFO     | PanDA job id: 6962922872
[2026-01-09 18:41:11] 2026-01-09 17:40:38,934 | INFO     | task id: 47898826
[2026-01-09 18:41:11] 2026-01-09 17:40:38,934 | INFO     | errors: (none)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,934 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:41:11] 2026-01-09 17:40:38,934 | INFO     | pilot state: finished 
[2026-01-09 18:41:11] 2026-01-09 17:40:38,934 | INFO     | transexitcode: 0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,934 | INFO     | exeerrorcode: 0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,935 | INFO     | exeerrordiag: 
[2026-01-09 18:41:11] 2026-01-09 17:40:38,935 | INFO     | exitcode: 0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,935 | INFO     | exitmsg: OK
[2026-01-09 18:41:11] 2026-01-09 17:40:38,935 | INFO     | cpuconsumptiontime: 90278 s
[2026-01-09 18:41:11] 2026-01-09 17:40:38,935 | INFO     | nevents: 400
[2026-01-09 18:41:11] 2026-01-09 17:40:38,935 | INFO     | neventsw: 0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,935 | INFO     | pid: 2845576
[2026-01-09 18:41:11] 2026-01-09 17:40:38,935 | INFO     | pgrp: 2845576
[2026-01-09 18:41:11] 2026-01-09 17:40:38,935 | INFO     | corecount: 12
[2026-01-09 18:41:11] 2026-01-09 17:40:38,936 | INFO     | event service: False
[2026-01-09 18:41:11] 2026-01-09 17:40:38,936 | INFO     | sizes: {0: 2283975, 3: 2284237, 11: 2284265, 8053: 2312107, 8055: 2321119, 8056: 2321175, 8133: 2321497}
[2026-01-09 18:41:11] 2026-01-09 17:40:38,936 | INFO     | --------------------------------------------------
[2026-01-09 18:41:11] 2026-01-09 17:40:38,936 | INFO     | 
[2026-01-09 18:41:11] 2026-01-09 17:40:38,936 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-09 18:41:11] 2026-01-09 17:40:38,954 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,954 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,954 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,954 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,956 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,956 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:41:11] 2026-01-09 17:40:38,956 | INFO     | job 6962922872 has completed (purged errors)
[2026-01-09 18:41:11] 2026-01-09 17:40:38,956 | INFO     | overall cleanup function is called
[2026-01-09 18:41:11] 2026-01-09 17:40:39,963 | INFO     | --- collectZombieJob: --- 10, [2845576]
[2026-01-09 18:41:11] 2026-01-09 17:40:39,963 | INFO     | zombie collector waiting for pid 2845576
[2026-01-09 18:41:11] 2026-01-09 17:40:39,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:41:11] 2026-01-09 17:40:39,964 | INFO     | collected zombie processes
[2026-01-09 18:41:11] 2026-01-09 17:40:39,964 | INFO     | will attempt to kill all subprocesses of pid=2845576
[2026-01-09 18:41:11] 2026-01-09 17:40:40,039 | INFO     | process IDs to be killed: [2845576] (in reverse order)
[2026-01-09 18:41:11] 2026-01-09 17:40:40,079 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:41:11] 2026-01-09 17:40:40,079 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:41:11] 2026-01-09 17:40:40,082 | INFO     | did not find any defunct processes belonging to 2845576
[2026-01-09 18:41:11] 2026-01-09 17:40:40,084 | INFO     | did not find any defunct processes belonging to 2845576
[2026-01-09 18:41:11] 2026-01-09 17:40:40,084 | INFO     | ready for new job
[2026-01-09 18:41:11] 2026-01-09 17:40:40,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:41:11] 2026-01-09 17:40:40,086 | INFO     | ***************************************
[2026-01-09 18:41:11] 2026-01-09 17:40:40,086 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:41:11] 2026-01-09 17:40:40,086 | INFO     | ***************************************
[2026-01-09 18:41:11] 2026-01-09 17:40:40,086 | INFO     | 
[2026-01-09 18:41:11] 2026-01-09 17:40:40,106 | INFO     | architecture information:
[2026-01-09 18:41:11] 2026-01-09 17:40:40,107 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:41:11] 2026-01-09 17:40:40,116 | INFO     | cat /etc/os-release:
[2026-01-09 18:41:11] NAME="CentOS Linux"
[2026-01-09 18:41:11] VERSION="7 (Core)"
[2026-01-09 18:41:11] ID="centos"
[2026-01-09 18:41:11] ID_LIKE="rhel fedora"
[2026-01-09 18:41:11] VERSION_ID="7"
[2026-01-09 18:41:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:41:11] ANSI_COLOR="0;31"
[2026-01-09 18:41:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:41:11] HOME_URL="https://www.centos.org/"
[2026-01-09 18:41:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:41:11] 
[2026-01-09 18:41:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:41:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:41:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:41:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:41:11] 
[2026-01-09 18:41:11] 2026-01-09 17:40:40,116 | INFO     | ***************************************
[2026-01-09 18:41:11] 2026-01-09 17:40:40,619 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-09 18:41:11] 2026-01-09 17:40:40,631 | INFO     | sufficient remaining disk space (35138830336 B)
[2026-01-09 18:41:11] 2026-01-09 17:40:40,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:41:11] 2026-01-09 17:40:40,632 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:41:11] 2026-01-09 17:40:40,632 | INFO     | update_server=False
[2026-01-09 18:41:11] 2026-01-09 17:40:40,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:41:11] 2026-01-09 17:40:40,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:41:11] 2026-01-09 17:40:40,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:41:11] 2026-01-09 17:40:40,889 | INFO     | all data control threads have been joined
[2026-01-09 18:41:11] 2026-01-09 17:40:40,900 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 18:41:11] 2026-01-09 17:40:40,900 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 18:41:11] 2026-01-09 17:40:40,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:41:11] 2026-01-09 17:40:40,902 | INFO     | will abort loop
[2026-01-09 18:41:11] 2026-01-09 17:40:41,248 | INFO     | all payload control threads have been joined
[2026-01-09 18:41:11] 2026-01-09 17:40:41,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:41:11] 2026-01-09 17:40:41,469 | INFO     | all job control threads have been joined
[2026-01-09 18:41:11] 2026-01-09 17:40:41,633 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:41,638 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:41,893 | INFO     | [data] control thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:41,907 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:42,157 | INFO     | [job] validate thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:42,253 | INFO     | [payload] control thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:42,321 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:42,349 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:42,475 | INFO     | [job] control thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:42,589 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:42,825 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:42,988 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:43,029 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:43,146 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:43,329 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:40:44,638 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:41:11] 2026-01-09 17:41:03,621 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:41:11] 2026-01-09 17:41:03,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364330989376)>', '<ExcThread(monitor, started 140363616478976)>']
[2026-01-09 18:41:11] 2026-01-09 17:41:08,826 | INFO     | all workflow threads have been joined
[2026-01-09 18:41:11] 2026-01-09 17:41:08,827 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:41:11] 2026-01-09 17:41:08,827 | INFO     | traces error code: 0
[2026-01-09 18:41:11] 2026-01-09 17:41:08,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:41:11] 2026-01-09 17:41:11,702 | INFO     | PID=2838969 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 18:41:11] 2026-01-09 17:41:11,702 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:41:11] 2026-01-09 17:41:11,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:41:11] 2026-01-09 17:41:11,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:41:11] 2026-01-09 17:41:11,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:41:11] 2026-01-09 17:41:11,703 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 18:41:11] 2026-01-09 17:41:11,703 | INFO     | [monitor] control thread has ended
[2026-01-09 18:41:11] 2026-01-09 17:41:11,787 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:41:11] 2026-01-09 17:41:11,789 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:41:11] 2026-01-09 17:41:11,791 [wrapper] pilotpid: 2838969
[2026-01-09 18:41:11] 2026-01-09 17:41:11,793 [wrapper] Pilot exit status: 0
[2026-01-09 18:41:11] 2026-01-09 17:41:11,802 [wrapper] pandaids: 6962922872
[2026-01-09 18:41:11] 2026-01-09 17:41:11,827 [wrapper] cleanup supervisor_pilot 2863107 2838970
[2026-01-09 18:41:11] 2026-01-09 17:41:11,829 [wrapper] Test setup, not cleaning
[2026-01-09 18:41:11] 2026-01-09 17:41:11,831 [wrapper] apfmon messages muted
[2026-01-09 18:41:11] 2026-01-09 17:41:11,834 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:41:11] 2026-01-09 17:41:11,836 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:41:11]  *** Error codes and diagnostics ***
[2026-01-09 18:41:11]     "exeErrorCode": 0,
[2026-01-09 18:41:11]     "exeErrorDiag": "",
[2026-01-09 18:41:11]     "pilotErrorCode": 0,
[2026-01-09 18:41:11]     "pilotErrorDiag": "",
[2026-01-09 18:41:11]  *** Listing of results directory ***
[2026-01-09 18:41:11] total 434812
[2026-01-09 18:41:11] -rwx------ 1 boinc boinc     36322 Jan  8 09:20 runpilot2-wrapper.sh
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:23 queuedata.json
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:23 pilot3.tar.gz
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc       100 Jan  9 16:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:41:11] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 16:24 run_atlas
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc       105 Jan  9 16:24 job.xml
[2026-01-09 18:41:11] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:24 start_atlas.sh
[2026-01-09 18:41:11] drwxrwx--x 2 boinc boinc      4096 Jan  9 16:24 shared
[2026-01-09 18:41:11] -rw-r--r-- 2 boinc boinc    592403 Jan  9 16:24 input.tar.gz
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc      6045 Jan  9 16:24 init_data.xml
[2026-01-09 18:41:11] -rw-r--r-- 2 boinc boinc 221704210 Jan  9 16:24 EVNT.47898824._000857.pool.root.1
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:24 boinc_lockfile
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc      2518 Jan  9 16:24 pandaJob.out
[2026-01-09 18:41:11] -rw------- 1 boinc boinc    989377 Jan  9 16:24 agis_schedconf.cvmfs.json
[2026-01-09 18:41:11] -rw------- 1 boinc boinc   1516240 Jan  9 16:24 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:41:11] drwx------ 5 boinc boinc      4096 Jan  9 16:24 pilot3
[2026-01-09 18:41:11] -rw------- 1 boinc boinc 216475624 Jan  9 18:38 HITS.47898826._022232.pool.root.1
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc       529 Jan  9 18:38 boinc_task_state.xml
[2026-01-09 18:41:11] -rw------- 1 boinc boinc      1066 Jan  9 18:39 memory_monitor_summary.json
[2026-01-09 18:41:11] -rw------- 1 boinc boinc    432187 Jan  9 18:39 log.47898826._022232.job.log.tgz.1
[2026-01-09 18:41:11] -rw------- 1 boinc boinc      7839 Jan  9 18:40 heartbeat.json
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc      8192 Jan  9 18:40 boinc_mmap_file
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc        27 Jan  9 18:40 wrapper_checkpoint.txt
[2026-01-09 18:41:11] -rw------- 1 boinc boinc       817 Jan  9 18:41 pilotlog.txt
[2026-01-09 18:41:11] -rw------- 1 boinc boinc        95 Jan  9 18:41 pilot_heartbeat.json
[2026-01-09 18:41:11] -rw------- 1 boinc boinc   1144494 Jan  9 18:41 log.47898826._022232.job.log.1
[2026-01-09 18:41:11] -rw------- 1 boinc boinc       357 Jan  9 18:41 output.list
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc       620 Jan  9 18:41 runtime_log
[2026-01-09 18:41:11] -rw------- 1 boinc boinc   1597440 Jan  9 18:41 result.tar.gz
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc      8888 Jan  9 18:41 runtime_log.err
[2026-01-09 18:41:11] -rw------- 1 boinc boinc       653 Jan  9 18:41 pr3NDmUR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBteKDmXNsrsm.diag
[2026-01-09 18:41:11] -rw-r--r-- 1 boinc boinc     21113 Jan  9 18:41 stderr.txt
[2026-01-09 18:41:11] HITS file was successfully produced:
[2026-01-09 18:41:11] -rw------- 1 boinc boinc 216475624 Jan  9 18:38 shared/HITS.pool.root.1
[2026-01-09 18:41:11]  *** Contents of shared directory: ***
[2026-01-09 18:41:11] total 430080
[2026-01-09 18:41:11] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:24 start_atlas.sh
[2026-01-09 18:41:11] -rw-r--r-- 2 boinc boinc    592403 Jan  9 16:24 input.tar.gz
[2026-01-09 18:41:11] -rw-r--r-- 2 boinc boinc 221704210 Jan  9 16:24 ATLAS.root_0
[2026-01-09 18:41:11] -rw------- 1 boinc boinc 216475624 Jan  9 18:38 HITS.pool.root.1
[2026-01-09 18:41:11] -rw------- 1 boinc boinc   1597440 Jan  9 18:41 result.tar.gz
18:41:13 (2835133): run_atlas exited; CPU time 90126.180947
18:41:13 (2835133): called boinc_finish(0)

</stderr_txt>
]]>

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