Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:33:22 (3060131): wrapper (7.7.26015): starting
08:33:22 (3060131): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 08:33:22] Arguments: --nthreads 3
[2026-01-09 08:33:22] Threads: 3
[2026-01-09 08:33:22] Checking for CVMFS
[2026-01-09 08:33:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:33:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:33:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:33:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:33:22] 2.9.2.0 2563955 2069 80740 154936 3 57 22687763 36864000 0 130560 0 1288620 99.989 79439 4832 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 08:33:22] CVMFS is ok
[2026-01-09 08:33:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:33:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 08:33:22] Further information can be found at the LHC@home message board.
[2026-01-09 08:33:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:33:22] Checking for apptainer binary...
[2026-01-09 08:33:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:33:22] Running /usr/bin/apptainer --version
[2026-01-09 08:33:22] apptainer version 1.4.1-1.1
[2026-01-09 08:33:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:33:22] thA349
[2026-01-09 08:33:22] apptainer works
[2026-01-09 08:33:22] Set ATHENA_PROC_NUMBER=3
[2026-01-09 08:33:22] Set ATHENA_CORE_NUMBER=3
[2026-01-09 08:33:22] Starting ATLAS job with PandaID=6963144025
[2026-01-09 08:33:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:28:59]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:28:59] 2026-01-09 09:28:29,607 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:29,607 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:29,611 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:29,659 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:29,988 | INFO     | [payload] control thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:30,107 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:30,145 | INFO     | [job] control thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:30,174 | INFO     | [job] validate thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:30,287 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:30,288 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:30,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:28:59] 2026-01-09 09:28:30,346 | INFO     | [data] control thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:30,611 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:30,854 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:31,173 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:34,328 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:36,343 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:28:59] 2026-01-09 09:28:39,125 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:28:59] 2026-01-09 09:28:40,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:28:59] 2026-01-09 09:28:40,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140255940179776)>', '<ExcThread(monitor, started 140255160162048)>']
[2026-01-09 10:28:59] 2026-01-09 09:28:45,542 | INFO     | all workflow threads have been joined
[2026-01-09 10:28:59] 2026-01-09 09:28:45,543 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:28:59] 2026-01-09 09:28:45,543 | INFO     | traces error code: 0
[2026-01-09 10:28:59] 2026-01-09 09:28:45,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:28:59] 2026-01-09 09:28:58,979 | INFO     | PID=3063853 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:28:59] 2026-01-09 09:28:58,979 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:28:59] 2026-01-09 09:28:58,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:28:59] 2026-01-09 09:28:58,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:28:59] 2026-01-09 09:28:58,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:28:59] 2026-01-09 09:28:58,979 | INFO     | [monitor] control thread has ended
[2026-01-09 10:28:59] 2026-01-09 09:28:59,025 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:28:59] 2026-01-09 09:28:59,028 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:28:59] 2026-01-09 09:28:59,030 [wrapper] pilotpid: 3063853
[2026-01-09 10:28:59] 2026-01-09 09:28:59,032 [wrapper] Pilot exit status: 0
[2026-01-09 10:28:59] 2026-01-09 09:28:59,039 [wrapper] pandaids: 6963144025
[2026-01-09 10:28:59] 2026-01-09 09:28:59,055 [wrapper] cleanup supervisor_pilot 3086755 3063854
[2026-01-09 10:28:59] 2026-01-09 09:28:59,057 [wrapper] Test setup, not cleaning
[2026-01-09 10:28:59] 2026-01-09 09:28:59,059 [wrapper] apfmon messages muted
[2026-01-09 10:28:59] 2026-01-09 09:28:59,062 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:28:59] 2026-01-09 09:28:59,064 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:28:59]  *** Error codes and diagnostics ***
[2026-01-09 10:28:59]     "exeErrorCode": 0,
[2026-01-09 10:28:59]     "exeErrorDiag": "",
[2026-01-09 10:28:59]     "pilotErrorCode": 0,
[2026-01-09 10:28:59]     "pilotErrorDiag": "",
[2026-01-09 10:28:59]  *** Listing of results directory ***
[2026-01-09 10:28:59] total 442152
[2026-01-09 10:28:59] -rwx------ 1 boinc boinc     36322 Jan  8 13:19 runpilot2-wrapper.sh
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc    579449 Jan  8 13:19 pilot3.tar.gz
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc      5112 Jan  8 13:19 queuedata.json
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc       100 Jan  9 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:28:59] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 08:33 run_atlas
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc       105 Jan  9 08:33 job.xml
[2026-01-09 10:28:59] -rw-r--r-- 2 boinc boinc 224197647 Jan  9 08:33 EVNT.47898824._001004.pool.root.1
[2026-01-09 10:28:59] -rw-r--r-- 2 boinc boinc    592387 Jan  9 08:33 input.tar.gz
[2026-01-09 10:28:59] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:33 start_atlas.sh
[2026-01-09 10:28:59] drwxrwx--x 2 boinc boinc      4096 Jan  9 08:33 shared
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:33 boinc_setup_complete
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc      6445 Jan  9 08:33 init_data.xml
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:33 boinc_lockfile
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc      2518 Jan  9 08:33 pandaJob.out
[2026-01-09 10:28:59] -rw------- 1 boinc boinc    989771 Jan  9 08:33 agis_schedconf.cvmfs.json
[2026-01-09 10:28:59] -rw------- 1 boinc boinc   1516240 Jan  9 08:33 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:28:59] drwx------ 5 boinc boinc      4096 Jan  9 08:33 pilot3
[2026-01-09 10:28:59] -rw------- 1 boinc boinc        95 Jan  9 10:28 pilot_heartbeat.json
[2026-01-09 10:28:59] -rw------- 1 boinc boinc 222134852 Jan  9 10:28 HITS.47898826._025249.pool.root.1
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc       529 Jan  9 10:28 boinc_task_state.xml
[2026-01-09 10:28:59] -rw------- 1 boinc boinc      1013 Jan  9 10:28 memory_monitor_summary.json
[2026-01-09 10:28:59] -rw------- 1 boinc boinc    273485 Jan  9 10:28 log.47898826._025249.job.log.tgz.1
[2026-01-09 10:28:59] -rw------- 1 boinc boinc      7745 Jan  9 10:28 heartbeat.json
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc        27 Jan  9 10:28 wrapper_checkpoint.txt
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc      8192 Jan  9 10:28 boinc_mmap_file
[2026-01-09 10:28:59] -rw------- 1 boinc boinc       747 Jan  9 10:28 pilotlog.txt
[2026-01-09 10:28:59] -rw------- 1 boinc boinc    995234 Jan  9 10:28 log.47898826._025249.job.log.1
[2026-01-09 10:28:59] -rw------- 1 boinc boinc       357 Jan  9 10:28 output.list
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc       620 Jan  9 10:28 runtime_log
[2026-01-09 10:28:59] -rw------- 1 boinc boinc   1290240 Jan  9 10:28 result.tar.gz
[2026-01-09 10:28:59] -rw------- 1 boinc boinc       659 Jan  9 10:28 u9iKDmKA4x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyWkKDmwJx0qm.diag
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc      8897 Jan  9 10:28 runtime_log.err
[2026-01-09 10:28:59] -rw-r--r-- 1 boinc boinc      6525 Jan  9 10:28 stderr.txt
[2026-01-09 10:28:59] HITS file was successfully produced:
[2026-01-09 10:28:59] -rw------- 1 boinc boinc 222134852 Jan  9 10:28 shared/HITS.pool.root.1
[2026-01-09 10:28:59]  *** Contents of shared directory: ***
[2026-01-09 10:28:59] total 437740
[2026-01-09 10:28:59] -rw-r--r-- 2 boinc boinc 224197647 Jan  9 08:33 ATLAS.root_0
[2026-01-09 10:28:59] -rw-r--r-- 2 boinc boinc    592387 Jan  9 08:33 input.tar.gz
[2026-01-09 10:28:59] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:33 start_atlas.sh
[2026-01-09 10:28:59] -rw------- 1 boinc boinc 222134852 Jan  9 10:28 HITS.pool.root.1
[2026-01-09 10:28:59] -rw------- 1 boinc boinc   1290240 Jan  9 10:28 result.tar.gz
10:29:00 (3060131): run_atlas exited; CPU time 20021.970725
10:29:00 (3060131): called boinc_finish(0)

</stderr_txt>
]]>

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